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2RVM
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BU of 2rvm by Molmil
Solution structure of the chromodomain of HP1alpha with the phosphorylated N-terminal tail
Descriptor: Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
2RVN
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BU of 2rvn by Molmil
Solution structure of the chromodomain of HP1a with the phosphorylated N-terminal tail complexed with H3K9me3 peptide
Descriptor: 18-mer peptide of Histone H3, Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
2RVL
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BU of 2rvl by Molmil
Solution structure of the chromodomain of HP1alpha with the N-terminal tail
Descriptor: Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
3UNC
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BU of 3unc by Molmil
Crystal Structure of Bovine Milk Xanthine Dehydrogenase to 1.65A Resolution
Descriptor: 2-HYDROXYBENZOIC ACID, CALCIUM ION, CARBONATE ION, ...
Authors:Eger, B.T, Okamoto, K, Nishino, T, Pai, E.F.
Deposit date:2011-11-15
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Protein conformational gating of enzymatic activity in xanthine oxidoreductase.
J.Am.Chem.Soc., 134, 2012
3UNI
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BU of 3uni by Molmil
Crystal Structure of Bovine Milk Xanthine Dehydrogenase with NADH Bound
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-HYDROXYBENZOIC ACID, CALCIUM ION, ...
Authors:Eger, B.T, Okamoto, K, Nishino, T, Pai, E.F.
Deposit date:2011-11-15
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Protein conformational gating of enzymatic activity in xanthine oxidoreductase.
J.Am.Chem.Soc., 134, 2012
3UNA
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BU of 3una by Molmil
Crystal Structure of Bovine Milk Xanthine Dehydrogenase with NAD Bound
Descriptor: 2-HYDROXYBENZOIC ACID, CALCIUM ION, CARBONATE ION, ...
Authors:Eger, B.T, Okamoto, K, Nishino, T, Pai, E.F.
Deposit date:2011-11-15
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein conformational gating of enzymatic activity in xanthine oxidoreductase.
J.Am.Chem.Soc., 134, 2012
3W0C
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BU of 3w0c by Molmil
Crystal Structure Analysis of Vitamin D receptor
Descriptor: (4S)-4-hydroxy-5-[2-methyl-4-(3-{3-methyl-4-[(1E)-4,4,4-trifluoro-3-hydroxy-3-(trifluoromethyl)but-1-en-1-yl]phenyl}pentan-3-yl)phenoxy]pentanoic acid, Vitamin D3 receptor
Authors:Itoh, S, Iijima, S.
Deposit date:2012-10-29
Release date:2013-11-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:structure analysis of vitamin D receptor
To be Published
3W0A
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BU of 3w0a by Molmil
Crystal Structure Analysis of Vitamin D receptor
Descriptor: (4S)-4-hydroxy-5-[2-methyl-4-(3-{3-methyl-4-[4,4,4-trifluoro-3-hydroxy-3-(trifluoromethyl)but-1-yn-1-yl]phenyl}pentan-3-yl)phenoxy]pentanoic acid, Vitamin D3 receptor
Authors:Itoh, S, Iijima, S.
Deposit date:2012-10-25
Release date:2013-11-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:structure analysis of vitamin D3 receptor
To be Published
6JRQ
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BU of 6jrq by Molmil
Crystal structure of adenylosuccinate synthetase, PurA, from Thermus thermophilus
Descriptor: 1,2-ETHANEDIOL, Adenylosuccinate synthetase, INOSINIC ACID
Authors:Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2019-04-05
Release date:2020-04-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of adenylosuccinate synthetase, PurA, from Thermus thermophilus HB8
To Be Published
3AZ1
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BU of 3az1 by Molmil
Crystal Structure Analysis of Vitamin D receptor
Descriptor: Vitamin D3 receptor, {4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}acetic acid
Authors:Itoh, S, Iijima, S.
Deposit date:2011-05-20
Release date:2011-11-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Novel nonsecosteroidal vitamin D(3) carboxylic acid analogs for osteoporosis, and SAR analysis.
Bioorg.Med.Chem., 19, 2011
3AZ2
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BU of 3az2 by Molmil
Crystal Structure Analysis of Vitamin D receptor
Descriptor: 5-{4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}pentanoic acid, Vitamin D3 receptor
Authors:Itoh, S, Iijima, S.
Deposit date:2011-05-20
Release date:2011-11-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Novel nonsecosteroidal vitamin D(3) carboxylic acid analogs for osteoporosis, and SAR analysis.
Bioorg.Med.Chem., 19, 2011
3AZ3
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BU of 3az3 by Molmil
Crystal Structure Analysis of Vitamin D receptor
Descriptor: (4S)-4-hydroxy-5-[4-(3-{4-[(3S)-3-hydroxy-4,4-dimethylpentyl]-3-methylphenyl}pentan-3-yl)-2-methylphenoxy]pentanoic acid, Vitamin D3 receptor
Authors:Itoh, S, Iijima, S.
Deposit date:2011-05-20
Release date:2011-11-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Novel nonsecosteroidal vitamin D(3) carboxylic acid analogs for osteoporosis, and SAR analysis.
Bioorg.Med.Chem., 19, 2011
3W0Y
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BU of 3w0y by Molmil
Crystal Structure Analysis of Vitamin D receptor
Descriptor: Vitamin D3 receptor, [3-fluoro-2'-methyl-4'-(3-{3-methyl-4-[(1E)-4,4,4-trifluoro-3-hydroxy-3-(trifluoromethyl)but-1-en-1-yl]phenyl}pentan-3-yl)biphenyl-4-yl]acetic acid
Authors:Itoh, S, Iijima, S.
Deposit date:2012-11-05
Release date:2013-11-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal Structure Analysis of Vitamin D receptor
TO BE PUBLISHED
5UND
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BU of 5und by Molmil
Crystal Structure of CTCF(ZnF 4-10) With 28-mer DNA
Descriptor: 1,2-ETHANEDIOL, DNA (26-MER), GLYCEROL, ...
Authors:Horton, J.R, Cheng, X.
Deposit date:2017-01-30
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.549 Å)
Cite:Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA.
Mol. Cell, 66, 2017
2O3Z
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BU of 2o3z by Molmil
X-ray crystal structure of LpxC complexed with 3-heptyloxybenzoate
Descriptor: 3-(heptyloxy)benzoic acid, CHLORIDE ION, SULFATE ION, ...
Authors:Gennadios, H.A, Whittington, D.A, Christianson, D.W.
Deposit date:2006-12-02
Release date:2007-02-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Amphipathic benzoic acid derivatives: synthesis and binding in the hydrophobic tunnel of the zinc deacetylase LpxC.
Bioorg.Med.Chem., 15, 2007
2Z5E
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BU of 2z5e by Molmil
Crystal Structure of Proteasome Assembling Chaperone 3
Descriptor: Proteasome Assembling Chaperone 3
Authors:Okamoto, K, Kurimoto, E, Sakata, E, Suzuki, A, Yamane, T, Hirano, Y, Murata, S, Tanaka, K, Kato, K.
Deposit date:2007-07-06
Release date:2008-02-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes
Nat.Struct.Mol.Biol., 15, 2008
3A2B
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BU of 3a2b by Molmil
Crystal Structure of Serine Palmitoyltransferase from Sphingobacterium multivorum with substrate L-serine
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SERINE, Serine palmitoyltransferase
Authors:Okamoto, A, Hoseki, J.
Deposit date:2009-05-09
Release date:2009-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into the Enzymatic Mechanism of Serine Palmitoyltransferase from Sphingobacterium multivorum
J.Biochem., 146, 2009
2Z2T
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BU of 2z2t by Molmil
Crystal structure of the complex between gp41 fragment N36 and fusion inhibitor SC34EK
Descriptor: ACETIC ACID, Fusion inhibitor peptide SC34EK, SULFATE ION, ...
Authors:Nakamura, S, Ohkubo, T, Kobayashi, Y.
Deposit date:2007-05-28
Release date:2008-06-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Intrahelical Salt-bridges in a-Helical Peptide Enhances its Binding to the Target: A New Design for HIV-1 Fusion Inhibitors
To be Published
1US5
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BU of 1us5 by Molmil
PUTATIVE GLUR0 LIGAND BINDING CORE WITH L-GLUTAMATE
Descriptor: 1,2-ETHANEDIOL, GLUTAMIC ACID, PUTATIVE GLUR0 LIGAND BINDING CORE
Authors:Tahirov, T.H, Inagaki, E.
Deposit date:2003-11-18
Release date:2003-11-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the Thermus Thermophilus Putative Periplasmic Glutamate/Glutamine-Binding Protein
Acta Crystallogr.,Sect.D, 60, 2004
2E7A
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BU of 2e7a by Molmil
TNF Receptor Subtype One-selective TNF Mutant with Antagonistic Activity
Descriptor: Tumor necrosis factor
Authors:Mukai, Y, Yamagata, Y, Tsutsumi, Y.
Deposit date:2007-01-09
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Creation and X-ray structure analysis of the tumor necrosis factor receptor-1-selective mutant of a tumor necrosis factor-alpha antagonist
J.Biol.Chem., 283, 2008
3A4P
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BU of 3a4p by Molmil
human c-MET kinase domain complexed with 6-benzyloxyquinoline inhibitor
Descriptor: (2E)-3-{6-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]quinolin-3-yl}-N-methylprop-2-enamide, CHLORIDE ION, Hepatocyte growth factor receptor, ...
Authors:Fukami, T.A, Kadono, S, Yamamuro, M, Matsuura, T.
Deposit date:2009-07-13
Release date:2010-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Discovery of 6-benzyloxyquinolines as c-Met selective kinase inhibitors
Bioorg.Med.Chem.Lett., 20, 2010
2D6F
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BU of 2d6f by Molmil
Crystal structure of Glu-tRNA(Gln) amidotransferase in the complex with tRNA(Gln)
Descriptor: Glutamyl-tRNA(Gln) amidotransferase subunit D, Glutamyl-tRNA(Gln) amidotransferase subunit E, ZINC ION, ...
Authors:Nureki, O.
Deposit date:2005-11-13
Release date:2006-07-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural basis of RNA-dependent recruitment of glutamine to the genetic code
Science, 312, 2006
2DKF
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BU of 2dkf by Molmil
Crystal Structure of TTHA0252 from Thermus thermophilus HB8, a RNA Degradation Protein of the Metallo-beta-lactamase Superfamily
Descriptor: ZINC ION, metallo-beta-lactamase superfamily protein
Authors:Ishikawa, I, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-10
Release date:2006-12-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of TTHA0252 from Thermus thermophilus HB8, a RNA degradation protein of the metallo-beta-lactamase superfamily
J.Biochem.(Tokyo), 140, 2006
6O1S
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BU of 6o1s by Molmil
Structure of human plasma kallikrein protease domain with inhibitor
Descriptor: 1,2-ETHANEDIOL, N-[(6-amino-2,4-dimethylpyridin-3-yl)methyl]-1-({4-[(1H-pyrazol-1-yl)methyl]phenyl}methyl)-1H-pyrazole-4-carboxamide, PHOSPHATE ION, ...
Authors:Partridge, J.R, Choy, R.M.
Deposit date:2019-02-21
Release date:2019-03-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of full-length plasma kallikrein bound to highly specific inhibitors describe a new mode of targeted inhibition.
J.Struct.Biol., 206, 2019
6UEO
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BU of 6ueo by Molmil
Structure of A. thaliana TBP-AC mismatch DNA site
Descriptor: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA-box-binding protein 1
Authors:Schumacher, M.A.
Deposit date:2019-09-22
Release date:2020-09-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020

222036

數據於2024-07-03公開中

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