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2CTZ
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BU of 2ctz by Molmil
Crystal structure of o-acetyl homoserine sulfhydrylase from Thermus thermophilus HB8
Descriptor: O-acetyl-L-homoserine sulfhydrylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Imagawa, T, Kousumi, Y, Tsuge, H, Utsunomiya, H, Ebihara, A, Nakagawa, N, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-24
Release date:2005-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of o-acetyl homoserine sulfhydrylase from Thermus thermophilus HB8
To be Published
2D5Y
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BU of 2d5y by Molmil
Aspartate Aminotransferase Mutant MC With Isovaleric Acid
Descriptor: Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
Deposit date:2005-11-08
Release date:2006-11-14
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D7Y
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BU of 2d7y by Molmil
Aspartate Aminotransferase Mutant MA
Descriptor: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
Deposit date:2005-11-30
Release date:2006-11-14
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D3Y
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BU of 2d3y by Molmil
Crystal structure of uracil-DNA glycosylase from Thermus Thermophilus HB8
Descriptor: 2'-DEOXYURIDINE-5'-MONOPHOSPHATE, ACETATE ION, IRON/SULFUR CLUSTER, ...
Authors:Kosaka, H, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-04
Release date:2006-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.
J.Mol.Biol., 373, 2007
2D7Z
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BU of 2d7z by Molmil
Aspartate Aminotransferase Mutant MAB Complexed with Maleic Acid
Descriptor: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
Deposit date:2005-11-30
Release date:2006-11-14
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D66
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BU of 2d66 by Molmil
Aspartate Aminotransferase Mutant MAB
Descriptor: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
Deposit date:2005-11-09
Release date:2006-11-14
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D65
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BU of 2d65 by Molmil
Aspartate Aminotransferase Mutant MABC
Descriptor: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
Deposit date:2005-11-09
Release date:2006-11-14
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2DC0
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BU of 2dc0 by Molmil
Crystal structure of amidase
Descriptor: probable amidase
Authors:Ohshima, T, Sakuraba, H, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Satoh, S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-17
Release date:2007-01-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of amidase
To be Published
2DDG
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BU of 2ddg by Molmil
Crystal structure of uracil-DNA glycosylase in complex with AP:G containing DNA
Descriptor: 5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*AP*AP*GP*GP*CP*AP*AP*CP*A)-3', ACETATE ION, ...
Authors:Kosaka, H, Nakagawa, N, Masui, R, Hoseki, J, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-01-28
Release date:2007-02-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.
J.Mol.Biol., 373, 2007
2DP6
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BU of 2dp6 by Molmil
Crystal structure of uracil-DNA glycosylase in complex with AP:C containing DNA
Descriptor: 5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*AP*AP*CP*GP*CP*AP*AP*CP*A)-3', DIHYDROGENPHOSPHATE ION, ...
Authors:Kosaka, H, Nakagawa, N, Masui, R, Kuramitsu, S, Hoseki, J, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-07
Release date:2007-05-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Family 5 Uracil-DNA Glycosylase Bound to DNA Reveals Insights into the Mechanism for Substrate Recognition and Catalysis
To be Published
2DKF
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BU of 2dkf by Molmil
Crystal Structure of TTHA0252 from Thermus thermophilus HB8, a RNA Degradation Protein of the Metallo-beta-lactamase Superfamily
Descriptor: ZINC ION, metallo-beta-lactamase superfamily protein
Authors:Ishikawa, I, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-10
Release date:2006-12-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of TTHA0252 from Thermus thermophilus HB8, a RNA degradation protein of the metallo-beta-lactamase superfamily
J.Biochem.(Tokyo), 140, 2006
2E6X
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BU of 2e6x by Molmil
X-ray structure of TT1592 from Thermus thermophilus HB8
Descriptor: Hypothetical protein TTHA1281
Authors:Yamada, M, Nakagawa, N, Kanagawa, M, Kuramitsu, S, Kamitori, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-05
Release date:2007-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of TT1592 from Thermus thermophilus HB8
To be Published
2E6K
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BU of 2e6k by Molmil
X-ray structure of Thermus thermopilus HB8 TT0505
Descriptor: Transketolase
Authors:Yoshida, H, Kamitori, S, Agari, Y, Iino, H, Kanagawa, M, Nakagawa, N, Ebihara, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-27
Release date:2007-11-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:X-ray structure of Thermus thermophilus HB8 TT0505
To be Published
2D64
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BU of 2d64 by Molmil
Aspartate Aminotransferase Mutant MABC With Isovaleric Acid
Descriptor: Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
Deposit date:2005-11-09
Release date:2006-11-14
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D61
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BU of 2d61 by Molmil
Aspartate Aminotransferase Mutant MA With Maleic Acid
Descriptor: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
Deposit date:2005-11-08
Release date:2006-11-14
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D63
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BU of 2d63 by Molmil
Aspartate Aminotransferase Mutant MA With Isovaleric Acid
Descriptor: Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
Deposit date:2005-11-09
Release date:2006-11-14
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2DEM
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BU of 2dem by Molmil
Crystal structure of Uracil-DNA glycosylase in complex with AP:A containing DNA
Descriptor: 5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*AP*AP*AP*GP*CP*AP*AP*CP*A)-3', DIHYDROGENPHOSPHATE ION, ...
Authors:Kosaka, H, Nakagawa, N, Masui, R, Hoseki, J, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-13
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.
J.Mol.Biol., 373, 2007
2CWW
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BU of 2cww by Molmil
Crystal structure of Thermus thermophilus TTHA1280, a putative SAM-dependent RNA methyltransferase, in complex with S-adenosyl-L-homocysteine
Descriptor: ACETIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Pioszak, A.A, Murayama, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-27
Release date:2005-10-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of a putative RNA 5-methyluridine methyltransferase, Thermus thermophilus TTHA1280, and its complex with S-adenosyl-L-homocysteine.
Acta Crystallogr.,Sect.F, 61, 2005
2ZZI
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BU of 2zzi by Molmil
Crystal structure of TTHA1623 in a di-iron-bound form
Descriptor: ACETATE ION, FE (III) ION, Metallo-beta-lactamase superfamily protein
Authors:Yamamura, A, Okada, A, Kameda, Y, Ohtsuka, J, Nakagawa, N, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
Deposit date:2009-02-16
Release date:2010-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of TTHA1623, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8
Acta Crystallogr.,Sect.F, 65, 2009
3AUO
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BU of 3auo by Molmil
DNA polymerase X from Thermus thermophilus HB8 ternary complex with 1-nt gapped DNA and ddGTP
Descriptor: 1-nt gapped DNA, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase beta family (X family), ...
Authors:Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-02-11
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3B0Y
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BU of 3b0y by Molmil
K263D mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
Authors:Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-06-17
Release date:2012-05-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3B0X
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BU of 3b0x by Molmil
K263A mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
Authors:Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-06-17
Release date:2012-05-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
2YVN
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BU of 2yvn by Molmil
Crystal structure of NDX2 from thermus thermophilus HB8
Descriptor: MutT/nudix family protein
Authors:Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YVP
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BU of 2yvp by Molmil
Crystal structure of NDX2 in complex with MG2+ and ampcpr from thermus thermophilus HB8
Descriptor: MAGNESIUM ION, METHYLENE ADP-BETA-XYLOSE, MutT/nudix family protein
Authors:Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YVM
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BU of 2yvm by Molmil
Crystal structure of NDX2 in complex with MG2+ from thermus thermophilus HB8
Descriptor: MAGNESIUM ION, MutT/nudix family protein
Authors:Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008

221051

數據於2024-06-12公開中

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