1SWT
 
 | | CORE-STREPTAVIDIN MUTANT D128A IN COMPLEX WITH BIOTIN AT PH 4.5 | | Descriptor: | BIOTIN, PROTEIN (STREPTAVIDIN) | | Authors: | Freitag, S, Le Trong, I, Chu, V, Klumb, L.A, Stayton, P.S, Stenkamp, R.E. | | Deposit date: | 1998-10-22 | | Release date: | 1999-07-30 | | Last modified: | 2023-08-23 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A structural snapshot of an intermediate on the streptavidin-biotin dissociation pathway.
Proc.Natl.Acad.Sci.USA, 96, 1999
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1SWU
 | | STREPTAVIDIN MUTANT Y43F | | Descriptor: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, STREPTAVIDIN | | Authors: | Freitag, S, Le Trong, I, Klumb, L.A, Stayton, P.S, Stenkamp, R.E. | | Deposit date: | 1998-10-12 | | Release date: | 1999-11-10 | | Last modified: | 2023-08-23 | | Method: | X-RAY DIFFRACTION (1.14 Å) | | Cite: | Atomic resolution structure of biotin-free Tyr43Phe streptavidin: what is in the binding site?
Acta Crystallogr.,Sect.D, 55, 1999
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1SWS
 | | CORE-STREPTAVIDIN MUTANT D128A AT PH 4.5 | | Descriptor: | PROTEIN (STREPTAVIDIN) | | Authors: | Freitag, S, Chu, V, Le Trong, I, Klumb, L.A, To, R, Stayton, P.S, Stenkamp, R.E. | | Deposit date: | 1998-10-22 | | Release date: | 1999-07-30 | | Last modified: | 2023-08-23 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A structural snapshot of an intermediate on the streptavidin-biotin dissociation pathway.
Proc.Natl.Acad.Sci.USA, 96, 1999
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1SWE
 | | APO-CORE-STREPTAVIDIN IN COMPLEX WITH BIOTIN AT PH 4.5 | | Descriptor: | BIOTIN, STREPTAVIDIN | | Authors: | Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E. | | Deposit date: | 1997-03-04 | | Release date: | 1998-03-04 | | Last modified: | 2024-05-22 | | Method: | X-RAY DIFFRACTION (2.06 Å) | | Cite: | Structural studies of the streptavidin binding loop.
Protein Sci., 6, 1997
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1SWC
 | | APO-CORE-STREPTAVIDIN AT PH 4.5 | | Descriptor: | STREPTAVIDIN | | Authors: | Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E. | | Deposit date: | 1997-03-04 | | Release date: | 1998-03-04 | | Last modified: | 2024-05-22 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Structural studies of the streptavidin binding loop.
Protein Sci., 6, 1997
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1SWD
 | | APO-CORE-STREPTAVIDIN IN COMPLEX WITH BIOTIN (TWO UNOCCUPIED BINDING SITES) AT PH 4.5 | | Descriptor: | BIOTIN, STREPTAVIDIN | | Authors: | Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E. | | Deposit date: | 1997-03-04 | | Release date: | 1998-03-04 | | Last modified: | 2024-05-22 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Structural studies of the streptavidin binding loop.
Protein Sci., 6, 1997
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1SWB
 | | APO-CORE-STREPTAVIDIN AT PH 7.5 | | Descriptor: | STREPTAVIDIN | | Authors: | Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E. | | Deposit date: | 1997-03-04 | | Release date: | 1998-03-04 | | Last modified: | 2024-05-22 | | Method: | X-RAY DIFFRACTION (1.85 Å) | | Cite: | Structural studies of the streptavidin binding loop.
Protein Sci., 6, 1997
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1SWA
 | | APO-CORE-STREPTAVIDIN AT PH 4.5 | | Descriptor: | STREPTAVIDIN | | Authors: | Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E. | | Deposit date: | 1997-03-02 | | Release date: | 1998-03-04 | | Last modified: | 2024-04-03 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Structural studies of the streptavidin binding loop.
Protein Sci., 6, 1997
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2D3W
 | | Crystal Structure of Escherichia coli SufC, an ATPase compenent of the SUF iron-sulfur cluster assembly machinery | | Descriptor: | Probable ATP-dependent transporter sufC | | Authors: | Kitaoka, S, Wada, K, Hasegawa, Y, Minami, Y, Takahashi, Y, Fukuyama, K. | | Deposit date: | 2005-10-03 | | Release date: | 2006-01-17 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Crystal structure of Escherichia coli SufC, an ABC-type ATPase component of the SUF iron-sulfur cluster assembly machinery
Febs Lett., 580, 2006
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2YYN
 | | Crystal structure of human bromodomain protein | | Descriptor: | Transcription intermediary factor 1-alpha | | Authors: | Kishishita, S, Uchikubo-Kamo, T, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-04-30 | | Release date: | 2008-05-06 | | Last modified: | 2022-12-21 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Crystal structure of human bromodomain protein
To be Published
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2YY9
 | | Crystal structure of BTB domain from mouse HKR3 | | Descriptor: | Zinc finger and BTB domain-containing protein 48 | | Authors: | Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-04-27 | | Release date: | 2008-04-29 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Crystal structure of BTB domain from mouse HKR3
To be Published
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2YY1
 | | Crystal structure of N-terminal domain of human galectin-9 containing L-acetyllactosamine | | Descriptor: | Galectin-9, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose | | Authors: | Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-04-27 | | Release date: | 2008-04-29 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.17 Å) | | Cite: | Crystal structure of N-terminal domain of human galectin-9 containing L-acetyllactosamine
To be Published
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2Z17
 | | Crystal structure of PDZ domain from human Pleckstrin homology, Sec7 | | Descriptor: | Pleckstrin homology Sec7 and coiled-coil domains-binding protein | | Authors: | Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-05-08 | | Release date: | 2008-05-13 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | Crystal structure of PDZ domain from human Pleckstrin homology, Sec7
To be Published
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2YXM
 | | Crystal structure of I-set domain of human Myosin Binding ProteinC | | Descriptor: | Myosin-binding protein C, slow-type | | Authors: | Kishishita, S, Ohsawa, N, Murayama, K, Chen, L, Liu, Z, Terada, T, Shirouzu, M, Wang, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-04-26 | | Release date: | 2007-10-30 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.51 Å) | | Cite: | Crystal structure of I-set domain of human Myosin Binding ProteinC
To be Published
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2YV8
 | | Crystal structure of N-terminal domain of human galectin-8 | | Descriptor: | Galectin-8 variant | | Authors: | Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-04-10 | | Release date: | 2008-04-15 | | Last modified: | 2024-10-09 | | Method: | X-RAY DIFFRACTION (1.92 Å) | | Cite: | Crystal structure of N-terminal domain of human galectin-8
To be Published
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2YXS
 | | Crystal Structure of N-terminal domain of human galectin-8 with D-lactose | | Descriptor: | Galectin-8 variant, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | | Authors: | Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-04-27 | | Release date: | 2008-05-06 | | Last modified: | 2024-10-09 | | Method: | X-RAY DIFFRACTION (2.13 Å) | | Cite: | Crystal Structure of N-terminal domain of human galectin-8 with D-lactose
To be Published
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2YYO
 | | Crystal structure of human SPRY domain | | Descriptor: | SPRY domain-containing protein 3 | | Authors: | Kishishita, S, Uchikubo-Kamo, T, Murayama, K, Terada, T, Chen, L, Fu, Z.Q, Chrzas, J, Shirouzu, M, Wang, B.C, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-04-30 | | Release date: | 2008-05-06 | | Last modified: | 2024-10-16 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Crystal structure of human SPRY domain
To be Published
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3VM8
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3VSE
 | | Crystal structure of methyltransferase | | Descriptor: | Putative uncharacterized protein, S-ADENOSYL-L-HOMOCYSTEINE | | Authors: | Kita, S, Tanaka, Y, Yao, M, Tanaka, I. | | Deposit date: | 2012-04-25 | | Release date: | 2013-04-10 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.099 Å) | | Cite: | Crystal structure of a putative methyltransferase SAV1081 from Staphylococcus aureus
Protein Pept.Lett., 20, 2012
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3VOW
 | | Crystal Structure of the Human APOBEC3C having HIV-1 Vif-binding Interface | | Descriptor: | CHLORIDE ION, Probable DNA dC->dU-editing enzyme APOBEC-3C, ZINC ION | | Authors: | Kitamura, S, Suzuki, A, Watanabe, N, Iwatani, Y. | | Deposit date: | 2012-02-22 | | Release date: | 2012-10-03 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.15 Å) | | Cite: | The APOBEC3C crystal structure and the interface for HIV-1 Vif binding.
Nat.Struct.Mol.Biol., 19, 2012
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7VNX
 | | Crystal structure of TkArkI | | Descriptor: | GUANOSINE, TkArkI | | Authors: | Yamashita, S, Minowa, K, Ohira, T, Suzuki, T, Tomita, K. | | Deposit date: | 2021-10-12 | | Release date: | 2022-05-04 | | Last modified: | 2024-05-29 | | Method: | X-RAY DIFFRACTION (1.801 Å) | | Cite: | Reversible RNA phosphorylation stabilizes tRNA for cellular thermotolerance.
Nature, 605, 2022
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5Y0R
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5Y0N
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5Y0Q
 | | Crystal structure of BsTmcAL bound with AMPCPP | | Descriptor: | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, UPF0348 protein B4417_3650 | | Authors: | Yamashita, S, Tomita, K. | | Deposit date: | 2017-07-18 | | Release date: | 2018-07-18 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
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5Y0O
 | | Crystal structure of apo BsTmcAL | | Descriptor: | UPF0348 protein B4417_3650 | | Authors: | Yamashita, S, Tomita, K. | | Deposit date: | 2017-07-18 | | Release date: | 2018-07-18 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
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