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Crystal structure of a DUF3836 family protein (BDI_3222) from Parabacteroides distasonis ATCC 8503 at 1.50 A resolution
Descriptor:	(4S)-2-METHYL-2,4-PENTANEDIOL, CITRIC ACID, PHOSPHATE ION, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2014-07-29
Release date:	2014-08-27
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Structures of single-layer beta-sheet proteins evolved from beta-hairpin repeats. Protein Sci., 28, 2019

4RBO

Crystal structure of a Nanog homeobox (NANOG) from Homo sapiens at 3.30 A resolution
Descriptor:	5'-D(CPTPTPGPAPAPTPGPGPGPCPC)-3', 5'-D(GPGPCPCPCPAPTPTPCPAPAPG)-3', Putative homeobox protein NANOGP8
Authors:	Joint Center for Structural Genomics (JCSG), Partnership for Stem Cell Biology (STEMCELL)
Deposit date:	2014-09-12
Release date:	2014-10-01
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (3.3 Å)
Cite:	Structure-based discovery of NANOG variant with enhanced properties to promote self-renewal and reprogramming of pluripotent stem cells. Proc.Natl.Acad.Sci.USA, 112, 2015

4U6G

Crystal structure of 10E8 Fab in complex with a hydrocarbon-stapled HIV-1 gp41 MPER peptide
Descriptor:	10E8 Fab Heavy Chain, 10E8 Fab Light Chain, SAH-MPER(662-683KKK)(B,q)
Authors:	Ofek, G, Bird, G.H, Walensky, L.D, Kwong, P.D.
Deposit date:	2014-07-28
Release date:	2014-12-03
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (4.2012 Å)
Cite:	Structural Fidelity and Neutralizing Antibody Binding Capacity of Hydrocarbon-Stapled HIV-1 Antigens To be published

1ZCZ

Crystal structure of Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase (TM1249) from THERMOTOGA MARITIMA at 1.88 A resolution
Descriptor:	Bifunctional purine biosynthesis protein purH, POTASSIUM ION, TETRAETHYLENE GLYCOL
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-04-13
Release date:	2005-04-26
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.88 Å)
Cite:	Crystal structure of AICAR transformylase IMP cyclohydrolase (TM1249) from Thermotoga maritima at 1.88 A resolution. Proteins, 71, 2008

2AFB

Crystal structure of 2-dehydro-3- deoxygluconokinase (EC 2.7.1.45) (tm0067) from THERMOTOGA MARITIMA at 2.05 A resolution
Descriptor:	2-keto-3-deoxygluconate kinase, CALCIUM ION, NICKEL (II) ION
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-07-25
Release date:	2006-02-14
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2.05 Å)
Cite:	Crystal structure of 2-keto-3-deoxygluconate kinase (TM0067) from Thermotoga maritima at 2.05 A resolution. Proteins, 70, 2007

1ZX8

CRYSTAL STRUCTURE OF an atypical cyclophilin (peptidylprolyl cis-trans isomerase) (TM1367) FROM THERMOTOGA MARITIMA AT 1.90 A RESOLUTION
Descriptor:	NICKEL (II) ION, PENTAETHYLENE GLYCOL, hypothetical protein TM1367
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-06-07
Release date:	2005-07-26
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Crystal structure of TM1367 from Thermotoga maritima at 1.90 A resolution reveals an atypical member of the cyclophilin (peptidylprolyl isomerase) fold. Proteins, 63, 2006

7N1J

Crystal structure of FGFR4 domain 3 in complex with a de novo-designed mini-binder
Descriptor:	Binder, Fibroblast growth factor receptor 4
Authors:	Park, J.S, Lee, S.
Deposit date:	2021-05-27
Release date:	2022-04-06
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (2.99 Å)
Cite:	Design of protein-binding proteins from the target structure alone. Nature, 605, 2022

7N1K

Crystal structure of a de novo-designed mini-protein targeting FGFR
Descriptor:	Binder
Authors:	Park, J.S, Lee, S.
Deposit date:	2021-05-27
Release date:	2022-04-06
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (3.01 Å)
Cite:	Design of protein-binding proteins from the target structure alone. Nature, 605, 2022

7N3T

TrkA ECD complex with designed miniprotein ligand
Descriptor:	1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Jude, K.M, Cao, L, Garcia, K.C.
Deposit date:	2021-06-01
Release date:	2022-04-20
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.84 Å)
Cite:	Design of protein-binding proteins from the target structure alone. Nature, 605, 2022

5IHU

Crystal structure of bovine Fab B11
Descriptor:	bovine Fab B11 heavy chain, bovine Fab B11 light chain
Authors:	Stanfield, R, Wilson, I.
Deposit date:	2016-02-29
Release date:	2016-10-05
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (2.06 Å)
Cite:	Conservation and diversity in the ultralong third heavy-chain complementarity-determining region of bovine antibodies. Sci Immunol, 1, 2016

1Z9F

Crystal structure of single stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60 A resolution
Descriptor:	Single-strand binding protein
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-04-01
Release date:	2005-04-12
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Crystal structure of a single-stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60 A resolution. Proteins, 63, 2006

1ZKG

Crystal structure of Transcriptional regulator, TETR family (tm1030) from Thermotoga maritima at 2.30 A resolution
Descriptor:	UNKNOWN LIGAND, transcriptional regulator, TetR family
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-05-02
Release date:	2005-07-26
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Crystal structure of TM1030 from Thermotoga maritima at 2.3 A resolution reveals molecular details of its transcription repressor function. Proteins, 68, 2007

2A6A

Crystal structure of Glycoprotein endopeptidase (tm0874) from THERMOTOGA MARITIMA at 2.50 A resolution
Descriptor:	UNKNOWN LIGAND, hypothetical protein TM0874
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-07-02
Release date:	2005-07-19
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Structure of an essential bacterial protein YeaZ (TM0874) from Thermotoga maritima at 2.5 A resolution. Acta Crystallogr.,Sect.F, 66, 2010

2B8N

Crystal structure of Glycerate kinase (EC 2.7.1.31) (tm1585) from THERMOTOGA MARITIMA at 2.70 A resolution
Descriptor:	glycerate kinase, putative
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-10-07
Release date:	2005-11-08
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2.53 Å)
Cite:	Crystal structure of a glycerate kinase (TM1585) from Thermotoga maritima at 2.70 A resolution reveals a new fold Proteins, 65, 2006

3YPI

ELECTROPHILIC CATALYSIS IN TRIOSEPHOSPHASE ISOMERASE: THE ROLE OF HISTIDINE-95
Descriptor:	PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:	Lolis, E, Petsko, G.A.
Deposit date:	1990-12-31
Release date:	1993-04-15
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Electrophilic catalysis in triosephosphate isomerase: the role of histidine-95. Biochemistry, 30, 1991

3KHI

Crystal structure of a Putative Metal-dependent Hydrolase (YP_001336084.1) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.95 A resolution
Descriptor:	1,2-ETHANEDIOL, CHLORIDE ION, Putative Metal-dependent Hydrolase, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2009-10-30
Release date:	2009-11-10
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	The Structure of Mlc Titration Factor A (MtfA/YeeI) Reveals a Prototypical Zinc Metallopeptidase Related to Anthrax Lethal Factor. J.Bacteriol., 194, 2012

6PZW

CryoEM derived model of NA-22 Fab in complex with N9 Shanghai2
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NA-22 fragment antigen binding heavy chain, ...
Authors:	Ward, A.B, Turner, H.L, Zhu, X.
Deposit date:	2019-08-01
Release date:	2019-12-04
Last modified:	2023-04-05
Method:	ELECTRON MICROSCOPY (3 Å)
Cite:	Structural Basis of Protection against H7N9 Influenza Virus by Human Anti-N9 Neuraminidase Antibodies. Cell Host Microbe, 26, 2019

6PW6

The HIV-1 Envelope Glycoprotein Clone BG505 SOSIP.664 in Complex with Three Copies of the Bovine Broadly Neutralizing Antibody, NC-Cow1, Fragment Antigen Binding Domain
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Broadly Neutralizing Antibody NC-Cow1 Heavy Chain, ...
Authors:	Berndsen, Z.T, Ward, A.B.
Deposit date:	2019-07-22
Release date:	2020-06-24
Last modified:	2020-07-29
Method:	ELECTRON MICROSCOPY (4.5 Å)
Cite:	Structural basis of broad HIV neutralization by a vaccine-induced cow antibody. Sci Adv, 6, 2020

6PZZ

CryoEM derived model of NA-80 Fab in complex with N9 Shanghai2
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NA-80 fragment antibody heavy chain, ...
Authors:	Ward, A.B, Turner, H.L, Zhu, X.
Deposit date:	2019-08-01
Release date:	2019-12-04
Last modified:	2023-04-05
Method:	ELECTRON MICROSCOPY (3.6 Å)
Cite:	Structural Basis of Protection against H7N9 Influenza Virus by Human Anti-N9 Neuraminidase Antibodies. Cell Host Microbe, 26, 2019

3L5O

Crystal structure of protein with unknown function from DUF364 family (ZP_00559375.1) from Desulfitobacterium hafniense DCB-2 at 2.01 A resolution
Descriptor:	1,2-ETHANEDIOL, CHLORIDE ION, IMIDAZOLE, ...
Authors:	Joint Center for Structural Genomics, Joint Center for Structural Genomics (JCSG)
Deposit date:	2009-12-22
Release date:	2010-02-02
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (2.01 Å)
Cite:	Structure of the first representative of Pfam family PF04016 (DUF364) reveals enolase and Rossmann-like folds that combine to form a unique active site with a possible role in heavy-metal chelation. Acta Crystallogr.,Sect.F, 66, 2010

3LIU

Crystal structure of Putative cell adhesion protein (YP_001304840.1) from Parabacteroides distasonis ATCC 8503 at 2.05 A resolution
Descriptor:	1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2010-01-25
Release date:	2010-02-09
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (2.05 Å)
Cite:	A Distinct Type of Pilus from the Human Microbiome. Cell, 165, 2016

3K5J

Crystal structure of Putative SUFU (suppressor of fused protein) homolog (YP_208451.1) from Neisseria gonorrhoeae FA 1090 at 1.40 A resolution
Descriptor:	GLYCEROL, SULFATE ION, Suppressor of fused family protein
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2009-10-07
Release date:	2010-01-26
Last modified:	2019-07-17
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu. Protein Sci., 19, 2010

6PZY

CryoEM derived model of NA-73 Fab in complex with N9 Shanghai2
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NA-73 fragment antibody heavy chain, ...
Authors:	Ward, A.B, Turner, H.L, Zhu, X.
Deposit date:	2019-08-01
Release date:	2019-12-04
Last modified:	2023-04-05
Method:	ELECTRON MICROSCOPY (3.17 Å)
Cite:	Structural Basis of Protection against H7N9 Influenza Virus by Human Anti-N9 Neuraminidase Antibodies. Cell Host Microbe, 26, 2019

3MSW

Crystal structure of a Protein with unknown function (BF3112) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution
Descriptor:	CHLORIDE ION, R-1,2-PROPANEDIOL, uncharacterized protein
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2010-04-29
Release date:	2010-06-09
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Structures of single-layer beta-sheet proteins evolved from beta-hairpin repeats. Protein Sci., 28, 2019

3M81

Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.50 A resolution (native apo structure)
Descriptor:	1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2010-03-17
Release date:	2010-04-21
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima. Proteins, 80, 2012

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