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3WEL
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BU of 3wel by Molmil
Sugar beet alpha-glucosidase with acarviosyl-maltotriose
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-glucosidase, GLYCEROL, ...
Authors:Tagami, T, Yamashita, K, Okuyama, M, Mori, H, Yao, M, Kimura, A.
Deposit date:2013-07-08
Release date:2014-07-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural advantage of sugar beet alpha-glucosidase to stabilize the Michaelis complex with long-chain substrate
J.Biol.Chem., 290, 2014
3VJF
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BU of 3vjf by Molmil
Crystal structure of de novo 4-helix bundle protein WA20
Descriptor: POTASSIUM ION, WA20
Authors:Arai, R, Kimura, A, Kobayashi, N, Matsuo, K, Sato, T, Wang, A.F, Platt, J.M, Bradley, L.H, Hecht, M.H.
Deposit date:2011-10-18
Release date:2012-03-28
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Domain-swapped dimeric structure of a stable and functional de novo four-helix bundle protein, WA20
J.Phys.Chem.B, 116, 2012
3WSU
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BU of 3wsu by Molmil
Crystal structure of beta-mannanase from Streptomyces thermolilacinus
Descriptor: Beta-mannanase, GLYCEROL, SODIUM ION
Authors:Kumagai, Y, Yamashita, K, Okuyama, M, Hatanaka, T, Yao, M, Kimura, A.
Deposit date:2014-03-26
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The loop structure of Actinomycete glycoside hydrolase family 5 mannanases governs substrate recognition
Febs J., 282, 2015
3W37
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BU of 3w37 by Molmil
Sugar beet alpha-glucosidase with acarbose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Tagami, T, Yamashita, K, Okuyama, M, Mori, H, Yao, M, Kimura, A.
Deposit date:2012-12-13
Release date:2013-05-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular basis for the recognition of long-chain substrates by plant & alpha-glucosidase
J.Biol.Chem., 288, 2013
3W38
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BU of 3w38 by Molmil
Sugar beet alpha-glucosidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-glucosidase, SULFATE ION, ...
Authors:Tagami, T, Yamashita, K, Okuyama, M, Mori, H, Yao, M, Kimura, A.
Deposit date:2012-12-13
Release date:2013-05-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Molecular basis for the recognition of long-chain substrates by plant & alpha-glucosidase
J.Biol.Chem., 288, 2013
2ZID
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BU of 2zid by Molmil
Crystal structure of dextran glucosidase E236Q complex with isomaltotriose
Descriptor: CALCIUM ION, Dextran glucosidase, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose
Authors:Hondoh, H, Saburi, W, Mori, H, Okuyama, M, Nakada, T, Matsuura, Y, Kimura, A.
Deposit date:2008-02-14
Release date:2008-06-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate recognition mechanism of alpha-1,6-glucosidic linkage hydrolyzing enzyme, dextran glucosidase from Streptococcus mutans.
J.Mol.Biol., 378, 2008
2ZIC
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BU of 2zic by Molmil
Crystal structure of Streptococcus mutans dextran glucosidase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Dextran glucosidase, ...
Authors:Hondoh, H, Saburi, W, Mori, H, Okuyama, M, Nakada, T, Matsuura, Y, Kimura, A.
Deposit date:2008-02-14
Release date:2008-06-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate recognition mechanism of alpha-1,6-glucosidic linkage hydrolyzing enzyme, dextran glucosidase from Streptococcus mutans.
J.Mol.Biol., 378, 2008
3GWF
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BU of 3gwf by Molmil
Open crystal structure of cyclohexanone monooxygenase
Descriptor: Cyclohexanone monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Mirza, I.A, Yachnin, B.J, Berghuis, A.M.
Deposit date:2009-04-01
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of cyclohexanone monooxygenase reveal complex domain movements and a sliding cofactor
J.Am.Chem.Soc., 131, 2009
3GWD
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BU of 3gwd by Molmil
Closed crystal structure of cyclohexanone monooxygenase
Descriptor: Cyclohexanone monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Mirza, I.A, Yachnin, B.J, Berghuis, A.M.
Deposit date:2009-03-31
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of cyclohexanone monooxygenase reveal complex domain movements and a sliding cofactor
J.Am.Chem.Soc., 131, 2009
1GLV
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BU of 1glv by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE GLUTATHIONE SYNTHETASE FROM ESCHERICHIA COLI B AT 2.0 ANGSTROMS RESOLUTION
Descriptor: GLUTATHIONE SYNTHASE
Authors:Yamaguchi, H, Kato, H, Tanaka, T, Katsube, Y.
Deposit date:1993-03-12
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Three-dimensional structure of the glutathione synthetase from Escherichia coli B at 2.0 A resolution.
J.Mol.Biol., 229, 1993
1V4G
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BU of 1v4g by Molmil
Crystal Structure of gamma-Glutamylcysteine Synthetase from Escherichia coli B
Descriptor: Glutamate--cysteine ligase
Authors:Hibi, T, Nii, H, Nakatsu, T, Kato, H, Hiratake, J, Oda, J.
Deposit date:2003-11-13
Release date:2004-10-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of gamma-glutamylcysteine synthetase: insights into the mechanism of catalysis by a key enzyme for glutathione homeostasis
PROC.NATL.ACAD.SCI.USA, 101, 2004
2E9Q
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BU of 2e9q by Molmil
Recombinant pro-11S globulin of pumpkin
Descriptor: 11S globulin subunit beta, CHLORIDE ION, PHOSPHATE ION
Authors:Fukuda, T, Prak, K, Itoh, T, Masuda, T, Maruyama, N, Mikami, B, Utsumi, S.
Deposit date:2007-01-26
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conservation and divergence on plant seed 11S globulins based on crystal structures.
Biochim.Biophys.Acta, 2010
2GLT
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BU of 2glt by Molmil
STRUCTURE OF ESCHERICHIA COLI GLUTATHIONE SYNTHETASE AT PH 6.0.
Descriptor: GLUTATHIONE BIOSYNTHETIC LIGASE
Authors:Matsuda, K, Yamaguchi, H, Kato, H, Nishioka, T, Katsube, Y, Oda, J.
Deposit date:1995-05-16
Release date:1995-07-31
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins.
Protein Eng., 9, 1996
2ZFU
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BU of 2zfu by Molmil
Structure of the methyltransferase-like domain of nucleomethylin
Descriptor: Cerebral protein 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Minami, H, Hashimoto, H, Murayama, A, Yanagisawa, J, Sato, M, Shimizu, T.
Deposit date:2008-01-14
Release date:2008-12-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Epigenetic control of rDNA loci in response to intracellular energy status
Cell(Cambridge,Mass.), 133, 2008
8WX4
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BU of 8wx4 by Molmil
Cryo-EM structure of human SLC15A4 in complex with Lys-Leu (outward-facing open)
Descriptor: LEUCINE, LYSINE, Solute carrier family 15 member 4
Authors:Sakaniwa, K, Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2023-10-27
Release date:2023-12-13
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Cryo-EM structure of human SLC15A4 in complex with Lys-Leu (outward-facing open)
To Be Published
8WX3
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BU of 8wx3 by Molmil
Cryo-EM structure of human SLC15A4 (outward-facing open)
Descriptor: Solute carrier family 15 member 4
Authors:Sakaniwa, K, Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2023-10-27
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Cryo-EM structure of human SLC15A4 (outward-facing open)
To Be Published
8WX2
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BU of 8wx2 by Molmil
Cryo-EM structure of human SLC15A3 (dimer)
Descriptor: Solute carrier family 15 member 3
Authors:Kasai, S, Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2023-10-27
Release date:2023-12-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Cryo-EM structure of human SLC15A3 (outward-facing partially occluded)
To Be Published
5XFM
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BU of 5xfm by Molmil
Crystal structure of beta-arabinopyranosidase
Descriptor: Alpha-glucosidase, CALCIUM ION
Authors:Kato, K, Okuyama, M, Yao, M.
Deposit date:2017-04-10
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A novel glycoside hydrolase family 97 enzyme: Bifunctional beta-l-arabinopyranosidase/ alpha-galactosidase from Bacteroides thetaiotaomicron.
Biochimie, 142, 2017
5B3N
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BU of 5b3n by Molmil
The crystal structure of anti-H4K20me1_scFv, 15F11
Descriptor: anti-H4K20me1_scFv
Authors:Kujirai, T, Horikoshi, N, Kurumizaka, H.
Deposit date:2016-03-04
Release date:2016-09-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:A Genetically Encoded Probe for Live-Cell Imaging of H4K20 Monomethylation
J.Mol.Biol., 428, 2016
6KOS
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BU of 6kos by Molmil
Crystal structure of SUWA (Super WA20), a hyper-stable de novo protein with a dimeric bisecting topology
Descriptor: SUWA (Super WA20)
Authors:Kimura, N, Arai, R.
Deposit date:2019-08-13
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:HyperstableDe NovoProtein with a Dimeric Bisecting Topology.
Acs Synth Biol, 9, 2020
5BS3
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BU of 5bs3 by Molmil
Crystal Structure of S.A. gyrase in complex with Compound 7
Descriptor: (4R)-3-fluoro-4-hydroxy-4-{[(1r,4R)-4-{[(3-oxo-3,4-dihydro-2H-pyrido[3,2-b][1,4]oxazin-6-yl)methyl]amino}-2-oxabicyclo[2.2.2]oct-1-yl]methyl}-4,5-dihydro-7H-pyrrolo[3,2,1-de][1,5]naphthyridin-7-one, DNA gyrase subunit A and B, DNA/RNA (5'-R(P*AP*GP*CP*CP*G)-D(P*T)-R(P*AP*GP*GP*GP*CP*CP*C)-D(P*T)-R(P*AP*CP*GP*GP*C)-D(P*T)-3'), ...
Authors:Lu, J, Patel, S, Soisson, S.
Deposit date:2015-06-01
Release date:2015-06-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Tricyclic 1,5-naphthyridinone oxabicyclooctane-linked novel bacterial topoisomerase inhibitors as broad-spectrum antibacterial agents-SAR of left-hand-side moiety (Part-2).
Bioorg.Med.Chem.Lett., 25, 2015
8J3M
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BU of 8j3m by Molmil
Structure of GH1 Br2 beta-glucosidase from bovine rumen metagenome
Descriptor: Beta-glucosidase, GLYCEROL, SULFATE ION
Authors:Kaenying, W, Kongsaeree, P.T, Tagami, T.
Deposit date:2023-04-17
Release date:2023-11-22
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Structural and mutational analysis of glycoside hydrolase family 1 Br2 beta-glucosidase derived from bovine rumen metagenome.
Heliyon, 9, 2023
8J5L
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BU of 8j5l by Molmil
Structure of GH1 Br2 beta-glucosidase E163Q mutant from bovine rumen metagenome
Descriptor: Beta-glucosidase, GLYCEROL, SULFATE ION
Authors:Kaenying, W, Kongsaeree, P.T, Tagami, T.
Deposit date:2023-04-23
Release date:2023-11-22
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (2.095 Å)
Cite:Structural and mutational analysis of glycoside hydrolase family 1 Br2 beta-glucosidase derived from bovine rumen metagenome.
Heliyon, 9, 2023
8J5M
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BU of 8j5m by Molmil
Structure of GH1 Br2 beta-glucosidase E350G mutant from bovine rumen metagenome
Descriptor: ACETATE ION, Beta-glucosidase, SULFATE ION
Authors:Kaenying, W, Kongsaeree, P.T, Tagami, T.
Deposit date:2023-04-23
Release date:2023-11-22
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (1.621 Å)
Cite:Structural and mutational analysis of glycoside hydrolase family 1 Br2 beta-glucosidase derived from bovine rumen metagenome.
Heliyon, 9, 2023
1GSA
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BU of 1gsa by Molmil
STRUCTURE OF GLUTATHIONE SYNTHETASE COMPLEXED WITH ADP AND GLUTATHIONE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLUTATHIONE, GLUTATHIONE SYNTHETASE, ...
Authors:Hara, T, Kato, H, Nishioka, T, Katsube, Y, Oda, J.
Deposit date:1995-06-08
Release date:1996-06-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:A pseudo-michaelis quaternary complex in the reverse reaction of a ligase: structure of Escherichia coli B glutathione synthetase complexed with ADP, glutathione, and sulfate at 2.0 A resolution.
Biochemistry, 35, 1996

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數據於2024-07-31公開中

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