3KTI
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![BU of 3kti by Molmil](/molmil-images/mine/3kti) | Structure of ClpP in complex with ADEP1 | Descriptor: | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ATP-dependent Clp protease proteolytic subunit, Acyldepsipeptide 1, ... | Authors: | Lee, B.-G, Brotz-Oesterhelt, H, Song, H.K. | Deposit date: | 2009-11-25 | Release date: | 2010-03-23 | Last modified: | 2013-02-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism Nat.Struct.Mol.Biol., 17, 2010
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3KTK
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3KTG
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3WO2
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![BU of 3wo2 by Molmil](/molmil-images/mine/3wo2) | Crystal structure of human interleukin-18 | Descriptor: | 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Interleukin-18, SULFATE ION | Authors: | Tsutsumi, N, Kimura, T, Arita, K, Ariyoshi, M, Ohnishi, H, Kondo, N, Shirakawa, M, Kato, Z, Tochio, H. | Deposit date: | 2013-12-19 | Release date: | 2014-12-17 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.33 Å) | Cite: | The structural basis for receptor recognition of human interleukin-18 Nat Commun, 5, 2014
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3WO4
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![BU of 3wo4 by Molmil](/molmil-images/mine/3wo4) | Crystal structure of the IL-18 signaling ternary complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Tsutsumi, N, Kimura, T, Arita, K, Ariyoshi, M, Ohnishi, H, Kondo, N, Shirakawa, M, Kato, Z, Tochio, H. | Deposit date: | 2013-12-19 | Release date: | 2014-12-17 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | The structural basis for receptor recognition of human interleukin-18 Nat Commun, 5, 2014
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7XTL
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7XTN
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![BU of 7xtn by Molmil](/molmil-images/mine/7xtn) | Crystal structure of the C-terminal domain of Bombyx mori N-acetylglucosaminyltransferase IV in complex with N-acetylglucosamine | Descriptor: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetylglucosaminyltransferase IV | Authors: | Miyazaki, T, Oka, N, Mori, S. | Deposit date: | 2022-05-17 | Release date: | 2022-09-28 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.15 Å) | Cite: | Crystal structure and sugar-binding ability of the C-terminal domain of N-acetylglucosaminyltransferase IV establish a new carbohydrate-binding module family. Glycobiology, 32, 2022
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7XTM
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![BU of 7xtm by Molmil](/molmil-images/mine/7xtm) | Crystal structure of the C-terminal domain of Bombyx mori N-acetylglucosaminyltransferase IV | Descriptor: | 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, N-acetylglucosaminyltransferase IV | Authors: | Miyazaki, T, Oka, N, Mori, S. | Deposit date: | 2022-05-17 | Release date: | 2022-09-28 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.47 Å) | Cite: | Crystal structure and sugar-binding ability of the C-terminal domain of N-acetylglucosaminyltransferase IV establish a new carbohydrate-binding module family. Glycobiology, 32, 2022
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7WJE
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![BU of 7wje by Molmil](/molmil-images/mine/7wje) | Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase mutant D394A in complex with nigerotetraose | Descriptor: | 1,2-ETHANEDIOL, Alpha-xylosidase, alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose | Authors: | Ikegaya, M, Miyazaki, T. | Deposit date: | 2022-01-06 | Release date: | 2022-03-30 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides. J.Biol.Chem., 298, 2022
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7WJD
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![BU of 7wjd by Molmil](/molmil-images/mine/7wjd) | Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase mutant D394A in complex with nigerotriose | Descriptor: | 1,2-ETHANEDIOL, Alpha-xylosidase, alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose, ... | Authors: | Ikegaya, M, Miyazaki, T. | Deposit date: | 2022-01-06 | Release date: | 2022-03-30 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides. J.Biol.Chem., 298, 2022
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7WJF
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![BU of 7wjf by Molmil](/molmil-images/mine/7wjf) | Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase mutant D394A in complex with kojibiose | Descriptor: | 1,2-ETHANEDIOL, Alpha-xylosidase, alpha-D-glucopyranose-(1-2)-alpha-D-glucopyranose | Authors: | Ikegaya, M, Miyazaki, T. | Deposit date: | 2022-01-06 | Release date: | 2022-03-30 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides. J.Biol.Chem., 298, 2022
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7WJB
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![BU of 7wjb by Molmil](/molmil-images/mine/7wjb) | Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase in complex with glucose | Descriptor: | 1,2-ETHANEDIOL, Alpha-xylosidase, alpha-D-glucopyranose, ... | Authors: | Ikegaya, M, Miyazaki, T. | Deposit date: | 2022-01-06 | Release date: | 2022-03-30 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides. J.Biol.Chem., 298, 2022
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7WJC
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![BU of 7wjc by Molmil](/molmil-images/mine/7wjc) | Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase mutant D394A in complex with nigerose | Descriptor: | 1,2-ETHANEDIOL, Alpha-xylosidase, alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose | Authors: | Ikegaya, M, Miyazaki, T. | Deposit date: | 2022-01-06 | Release date: | 2022-03-30 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides. J.Biol.Chem., 298, 2022
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7WJ9
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![BU of 7wj9 by Molmil](/molmil-images/mine/7wj9) | Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase, P21 space group | Descriptor: | 1,2-ETHANEDIOL, Alpha-xylosidase, Xylitol | Authors: | Ikegaya, M, Miyazaki, T. | Deposit date: | 2022-01-06 | Release date: | 2022-03-30 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides. J.Biol.Chem., 298, 2022
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7WJA
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![BU of 7wja by Molmil](/molmil-images/mine/7wja) | Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase, P6322 space group | Descriptor: | 1,2-ETHANEDIOL, Alpha-xylosidase | Authors: | Ikegaya, M, Miyazaki, T. | Deposit date: | 2022-01-06 | Release date: | 2022-03-30 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides. J.Biol.Chem., 298, 2022
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6LGD
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![BU of 6lgd by Molmil](/molmil-images/mine/6lgd) | Bombyx mori GH13 sucrose hydrolase complexed with 1,4-dideoxy-1,4-imino-D-arabinitol | Descriptor: | 1,4-DIDEOXY-1,4-IMINO-D-ARABINITOL, CALCIUM ION, GLYCEROL, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGA
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![BU of 6lga by Molmil](/molmil-images/mine/6lga) | Bombyx mori GH13 sucrose hydrolase | Descriptor: | CALCIUM ION, GLYCEROL, MAGNESIUM ION, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGH
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![BU of 6lgh by Molmil](/molmil-images/mine/6lgh) | Bombyx mori GH13 sucrose hydrolase mutant E322Q covalent intermediate | Descriptor: | CALCIUM ION, MAGNESIUM ION, Sucrose hydrolase, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGG
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![BU of 6lgg by Molmil](/molmil-images/mine/6lgg) | Bombyx mori GH13 sucrose hydrolase mutant E322Q complexed with sucrose | Descriptor: | CALCIUM ION, MAGNESIUM ION, Sucrose hydrolase, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.84 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGI
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6LGC
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![BU of 6lgc by Molmil](/molmil-images/mine/6lgc) | Bombyx mori GH13 sucrose hydrolase complexed with 1-deoxynojirimycin | Descriptor: | 1-DEOXYNOJIRIMYCIN, CALCIUM ION, GLYCEROL, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGE
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![BU of 6lge by Molmil](/molmil-images/mine/6lge) | Bombyx mori GH13 sucrose hydrolase complexed with acarbose | Descriptor: | 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, CALCIUM ION, MAGNESIUM ION, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGF
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![BU of 6lgf by Molmil](/molmil-images/mine/6lgf) | Bombyx mori GH13 sucrose hydrolase mutant D247N complexed with sucrose | Descriptor: | CALCIUM ION, MAGNESIUM ION, Sucrose hydrolase, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGB
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![BU of 6lgb by Molmil](/molmil-images/mine/6lgb) | Bombyx mori GH13 sucrose hydrolase complexed with glucose | Descriptor: | CALCIUM ION, GLYCEROL, MAGNESIUM ION, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6M76
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![BU of 6m76 by Molmil](/molmil-images/mine/6m76) | GH31 alpha-N-acetylgalactosaminidase from Enterococcus faecalis | Descriptor: | 1,2-ETHANEDIOL, LPXTG-motif cell wall anchor domain protein | Authors: | Miyazaki, T. | Deposit date: | 2020-03-17 | Release date: | 2020-05-20 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Crystal structure of the Enterococcus faecalis alpha-N-acetylgalactosaminidase, a member of the glycoside hydrolase family 31. Febs Lett., 594, 2020
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