Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2O7E
DownloadVisualize
BU of 2o7e by Molmil
Tyrosine ammonia-lyase from Rhodobacter sphaeroides (His89Phe variant), bound to 2-aminoindan-2-phosphonic acid
Descriptor: (2-AMINO-2,3-DIHYDRO-1H-INDEN-2-YL)PHOSPHONIC ACID, Putative histidine ammonia-lyase
Authors:Louie, G.V, Bowman, M.E, Moffitt, M.C, Baiga, T.J, Moore, B.S, Noel, J.P.
Deposit date:2006-12-11
Release date:2007-01-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural determinants and modulation of substrate specificity in phenylalanine-tyrosine ammonia-lyases.
Chem.Biol., 13, 2006
2O6Y
DownloadVisualize
BU of 2o6y by Molmil
Tyrosine ammonia-lyase from Rhodobacter sphaeroides
Descriptor: Putative histidine ammonia-lyase
Authors:Louie, G.V, Bowman, M.E, Moffitt, M.C, Baiga, T.J, Moore, B.S, Noel, J.P.
Deposit date:2006-12-09
Release date:2007-01-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural determinants and modulation of substrate specificity in phenylalanine-tyrosine ammonia-lyases.
Chem.Biol., 13, 2006
2NYN
DownloadVisualize
BU of 2nyn by Molmil
Crystal structure of phenylalanine ammonia-lyase from Anabaena variabilis
Descriptor: Phenylalanine/histidine ammonia-lyase
Authors:Louie, G.V, Moffitt, M.C, Bowman, M.E, Pence, J, Noel, J.P, Moore, B.S.
Deposit date:2006-11-21
Release date:2007-02-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of Two Cyanobacterial Phenylalanine Ammonia Lyases: Kinetic and Structural Characterization.
Biochemistry, 46, 2007
2O7D
DownloadVisualize
BU of 2o7d by Molmil
Tyrosine ammonia-lyase from Rhodobacter sphaeroides, complexed with caffeate
Descriptor: CAFFEIC ACID, Putative histidine ammonia-lyase
Authors:Louie, G.V, Bowman, M.E, Moffitt, M.C, Baiga, T.J, Moore, B.S, Noel, J.P.
Deposit date:2006-12-10
Release date:2007-01-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural determinants and modulation of substrate specificity in phenylalanine-tyrosine ammonia-lyases.
Chem.Biol., 13, 2006
4XLO
DownloadVisualize
BU of 4xlo by Molmil
Crystal Structure of EncM (crystallized with 4 mM NADPH)
Descriptor: FAD-dependent oxygenase EncM, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Teufel, R.
Deposit date:2015-01-13
Release date:2015-01-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
Nature, 503, 2013
2Q6K
DownloadVisualize
BU of 2q6k by Molmil
SalL with adenosine
Descriptor: ADENOSINE, DI(HYDROXYETHYL)ETHER, chlorinase
Authors:Pojer, F, Noel, J.P.
Deposit date:2007-06-05
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery and characterization of a marine bacterial SAM-dependent chlorinase
Nat.Chem.Biol., 4, 2008
6CXT
DownloadVisualize
BU of 6cxt by Molmil
Crystal structure of FAD-dependent dehydrogenase
Descriptor: 1,2-ETHANEDIOL, Alpha/beta hydrolase fold protein, Butyryl-CoA dehydrogenase, ...
Authors:Agarwal, V.
Deposit date:2018-04-04
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into Thiotemplated Pyrrole Biosynthesis Gained from the Crystal Structure of Flavin-Dependent Oxidase in Complex with Carrier Protein.
Biochemistry, 58, 2019
6CY8
DownloadVisualize
BU of 6cy8 by Molmil
Crystal structure of FAD-dependent dehydrogenase
Descriptor: 4'-PHOSPHOPANTETHEINE, Alpha/beta hydrolase fold protein, Butyryl-CoA dehydrogenase, ...
Authors:Agarwal, V.
Deposit date:2018-04-05
Release date:2019-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.729 Å)
Cite:Insights into Thiotemplated Pyrrole Biosynthesis Gained from the Crystal Structure of Flavin-Dependent Oxidase in Complex with Carrier Protein.
Biochemistry, 58, 2019
2Q6O
DownloadVisualize
BU of 2q6o by Molmil
SalL-Y70T with SAM and Cl
Descriptor: CHLORIDE ION, Hypothetical Protein, S-ADENOSYLMETHIONINE
Authors:Noel, J.P, Pojer, F.
Deposit date:2007-06-05
Release date:2007-12-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery and characterization of a marine bacterial SAM-dependent chlorinase
Nat.Chem.Biol., 4, 2008
2Q6I
DownloadVisualize
BU of 2q6i by Molmil
salL with ClDA and LMet
Descriptor: 5'-CHLORO-5'-DEOXYADENOSINE, DI(HYDROXYETHYL)ETHER, Hypothetical protein, ...
Authors:Noel, J.P, Pojer, F.
Deposit date:2007-06-05
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Discovery and characterization of a marine bacterial SAM-dependent chlorinase
Nat.Chem.Biol., 4, 2008
2Q6L
DownloadVisualize
BU of 2q6l by Molmil
SalL double mutant Y70T/G131S with CLDA and L-MET
Descriptor: 5'-CHLORO-5'-DEOXYADENOSINE, Hypothetical protein, METHIONINE
Authors:Pojer, F, Noel, J.P.
Deposit date:2007-06-05
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Discovery and characterization of a marine bacterial SAM-dependent chlorinase
Nat.Chem.Biol., 4, 2008
2WR8
DownloadVisualize
BU of 2wr8 by Molmil
Structure of Pyrococcus horikoshii SAM hydroxide adenosyltransferase in complex with SAH
Descriptor: PUTATIVE UNCHARACTERIZED PROTEIN PH0463, S-ADENOSYL-L-HOMOCYSTEINE
Authors:McMahon, S.A, Deng, H, O'Hagan, D, Johnson, K.A, Naismith, J.H.
Deposit date:2009-08-31
Release date:2009-09-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Mechanistic Insights Into Water Activation in Sam Hydroxide Adenosyltransferase (Duf-62).
Chembiochem, 10, 2009
4HNP
DownloadVisualize
BU of 4hnp by Molmil
Crystal structure of yeast 20S proteasome in complex with vinylketone carmaphycin analogue VNK1
Descriptor: N-hexanoyl-L-valyl-N~1~-[(3S,4S)-3-hydroxy-2,6-dimethylhept-1-en-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide, N-hexanoyl-L-valyl-N~1~-[(3S,4S)-3-hydroxy-2,6-dimethylheptan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide, Proteasome component C1, ...
Authors:Trivella, D.B.B, Stein, M, Groll, M.
Deposit date:2012-10-20
Release date:2014-01-29
Last modified:2014-07-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Enzyme inhibition by hydroamination: design and mechanism of a hybrid carmaphycin-syringolin enone proteasome inhibitor.
Chem.Biol., 21, 2014
4HRC
DownloadVisualize
BU of 4hrc by Molmil
Crystal structure of yeast 20S proteasome in complex with epoxyketone carmaphycin analogue 3
Descriptor: N-hexanoyl-L-valyl-N~1~-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide, Proteasome component C1, Proteasome component C11, ...
Authors:Trivella, D.B.B, Stein, M, Groll, M.
Deposit date:2012-10-27
Release date:2014-01-29
Last modified:2014-07-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Enzyme inhibition by hydroamination: design and mechanism of a hybrid carmaphycin-syringolin enone proteasome inhibitor.
Chem.Biol., 21, 2014
4HRD
DownloadVisualize
BU of 4hrd by Molmil
Crystal structure of yeast 20S proteasome in complex with the natural product carmaphycin A
Descriptor: N-[(2S)-1-({(2S)-1-{[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]amino}-4-[(R)-methylsulfinyl]-1-oxobutan-2-yl}amino)-3-methyl-1-oxobutan-2-yl]hexanamide, Proteasome component C1, Proteasome component C11, ...
Authors:Trivella, D.B.B, Stein, M, Groll, M.
Deposit date:2012-10-27
Release date:2014-01-29
Last modified:2014-07-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Enzyme inhibition by hydroamination: design and mechanism of a hybrid carmaphycin-syringolin enone proteasome inhibitor.
Chem.Biol., 21, 2014
4LTC
DownloadVisualize
BU of 4ltc by Molmil
Crystal structure of yeast 20S proteasome in complex with enone carmaphycin analogue 6
Descriptor: N-hexanoyl-L-valyl-N~1~-[(4S,5S,6R)-5-hydroxy-2,6-dimethyloctan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide, Probable proteasome subunit alpha type-7, Proteasome subunit alpha type-1, ...
Authors:Stein, M, Trivella, D.B.B, Groll, M.
Deposit date:2013-07-23
Release date:2014-07-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Enzyme inhibition by hydroamination: design and mechanism of a hybrid carmaphycin-syringolin enone proteasome inhibitor.
Chem.Biol., 21, 2014
7JPJ
DownloadVisualize
BU of 7jpj by Molmil
Crystal Structure of the essential dimeric LYSA from Phaeodactylum tricornutum
Descriptor: D-LYSINE, Diaminopimelate decarboxylase, SULFATE ION
Authors:Fedorov, E, Belinski, V.A, Brunson, J.K, Almo, S.C, Dupont, C.L, Ghosh, A.
Deposit date:2020-08-08
Release date:2021-06-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:The Phaeodactylum tricornutum diaminopimelate decarboxylase was acquired via horizontal gene transfer from bacteria and displays substrate promiscuity
Biorxiv, 2020
6FOQ
DownloadVisualize
BU of 6foq by Molmil
The crystal structure of EncM complexed with dioxygen under 15 bar of oxygen pressure.
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, OXYGEN MOLECULE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-02-08
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.386 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6FY8
DownloadVisualize
BU of 6fy8 by Molmil
The crystal structure of EncM bromide soak
Descriptor: BROMIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-03-11
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6FYA
DownloadVisualize
BU of 6fya by Molmil
The crystal structure of EncM under anaerobic conditions
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-03-11
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6FYC
DownloadVisualize
BU of 6fyc by Molmil
The crystal structure of EncM L144M mutant complex with dioxygen under 15 bars O2 pressure
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, OXYGEN MOLECULE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-03-11
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6FYF
DownloadVisualize
BU of 6fyf by Molmil
The crystal structure of EncM V135M mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-03-11
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6FP3
DownloadVisualize
BU of 6fp3 by Molmil
The crystal structure of EncM complexed with dioxygen under 5 bar of oxygen pressure.
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, OXYGEN MOLECULE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-02-09
Release date:2018-05-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.976 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6FYE
DownloadVisualize
BU of 6fye by Molmil
The crystal structure of EncM H138T mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-03-11
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6FYB
DownloadVisualize
BU of 6fyb by Molmil
The crystal structure of EncM L144M mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-03-11
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.882 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

223166

數據於2024-07-31公開中

PDB statisticsPDBj update infoContact PDBjnumon