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8I6H
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BU of 8i6h by Molmil
Crystal structure of the African swine fever virus DNA sliding clamp (selenomethionine form)
Descriptor: ASFV DNA sliding clamp
Authors:Wu, J, Gong, P.
Deposit date:2023-01-28
Release date:2023-06-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.292 Å)
Cite:Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp.
J.Biol.Chem., 299, 2023
8IIB
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BU of 8iib by Molmil
Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta85 mutant (residues 86-546)
Descriptor: CADMIUM ION, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Fang, X, Lu, G, Hou, C, Gong, P.
Deposit date:2023-02-24
Release date:2023-06-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Unusual substructure conformations observed in crystal structures of a dicistrovirus RNA-dependent RNA polymerase suggest contribution of the N-terminal extension in proper folding.
Virol Sin, 38, 2023
8I6G
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BU of 8i6g by Molmil
Crystal structure of the African swine fever virus DNA sliding clamp (native form)
Descriptor: ASFV DNA sliding clamp
Authors:Wu, J, Gong, P.
Deposit date:2023-01-28
Release date:2023-06-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp.
J.Biol.Chem., 299, 2023
8IIC
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BU of 8iic by Molmil
Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta40 mutant (residues 41-546)
Descriptor: Polymerase polyprotein
Authors:Fang, X, Lu, G, Hou, C, Gong, P.
Deposit date:2023-02-24
Release date:2023-06-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Unusual substructure conformations observed in crystal structures of a dicistrovirus RNA-dependent RNA polymerase suggest contribution of the N-terminal extension in proper folding.
Virol Sin, 38, 2023
6KWR
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BU of 6kwr by Molmil
Crystal structure of enterovirus 71 polymerase elongation complex (ddCTP form)
Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (31-MER), ...
Authors:Shi, W, Gong, P.
Deposit date:2019-09-08
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A nucleobase-binding pocket in a viral RNA-dependent RNA polymerase contributes to elongation complex stability.
Nucleic Acids Res., 48, 2020
6KWQ
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BU of 6kwq by Molmil
Crystal structure of enterovirus 71 polymerase elongation complex (native form)
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, MAGNESIUM ION, ...
Authors:Shi, W, Gong, P.
Deposit date:2019-09-08
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:A nucleobase-binding pocket in a viral RNA-dependent RNA polymerase contributes to elongation complex stability.
Nucleic Acids Res., 48, 2020
6KR3
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BU of 6kr3 by Molmil
Crystal structure of Dengue virus nonstructural protein NS5 (form 2)
Descriptor: GLYCEROL, Genome polyprotein, IODIDE ION, ...
Authors:Wu, J, Lu, G, Ye, H.Q, Gong, P.
Deposit date:2019-08-20
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.931 Å)
Cite:A conformation-based intra-molecular initiation factor identified in the flavivirus RNA-dependent RNA polymerase.
Plos Pathog., 16, 2020
6LSE
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BU of 6lse by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C3S6A/C3S6B form)
Descriptor: Genome polyprotein, PYROPHOSPHATE 2-, RNA (35-MER), ...
Authors:Wang, M, Shu, B, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
3HJH
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BU of 3hjh by Molmil
A rigid N-terminal clamp restrains the motor domains of the bacterial transcription-repair coupling factor
Descriptor: COBALT (II) ION, Transcription-repair-coupling factor
Authors:Murphy, M, Gong, P, Ralto, K, Manelyte, L, Savery, N, Theis, K.
Deposit date:2009-05-21
Release date:2009-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:An N-terminal clamp restrains the motor domains of the bacterial transcription-repair coupling factor Mfd.
Nucleic Acids Res., 37, 2009
7V1C
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BU of 7v1c by Molmil
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (in complex with SIN)
Descriptor: Core protein, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Jia, H, Gong, P.
Deposit date:2021-08-04
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct.
J.Virol., 96, 2022
7V1E
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BU of 7v1e by Molmil
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (in complex with SAH and m7GpppAmG)
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-(2'-O-METHYL)-ADENOSINE, Core protein, GLYCEROL, ...
Authors:Jia, H, Gong, P.
Deposit date:2021-08-04
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct.
J.Virol., 96, 2022
7V1I
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BU of 7v1i by Molmil
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (with an m7GMP-Arg28 adduct and in complex with SAH)
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, Core protein, GLYCEROL, ...
Authors:Jia, H, Gong, P.
Deposit date:2021-08-04
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct.
J.Virol., 96, 2022
7V1D
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BU of 7v1d by Molmil
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (in complex with SAH and GpppA)
Descriptor: Core protein, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Jia, H, Gong, P.
Deposit date:2021-08-04
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct.
J.Virol., 96, 2022
7V1J
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BU of 7v1j by Molmil
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (in complex with SAH and m7GpppA)
Descriptor: Core protein, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Jia, H, Gong, P.
Deposit date:2021-08-04
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct.
J.Virol., 96, 2022
7V1G
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BU of 7v1g by Molmil
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (with a GMP-Arg28 adduct and in complex with SAM)
Descriptor: CITRIC ACID, Core protein, GLYCEROL, ...
Authors:Jia, H, Gong, P.
Deposit date:2021-08-04
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct.
J.Virol., 96, 2022
7V1B
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BU of 7v1b by Molmil
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (in complex with SAH)
Descriptor: CITRIC ACID, Core protein, ISOPROPYL ALCOHOL, ...
Authors:Jia, H, Gong, P.
Deposit date:2021-08-04
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct.
J.Virol., 96, 2022
7V1F
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BU of 7v1f by Molmil
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (in complex with SAM and GTP)
Descriptor: Core protein, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Jia, H, Gong, P.
Deposit date:2021-08-04
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct.
J.Virol., 96, 2022
7V1H
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BU of 7v1h by Molmil
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (in complex with SAM and m7GTP)
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, CITRIC ACID, Core protein, ...
Authors:Jia, H, Gong, P.
Deposit date:2021-08-04
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct.
J.Virol., 96, 2022
6LSF
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BU of 6lsf by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C2S6RA/C2S6RB form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), ...
Authors:Wang, M, Shu, B, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.152 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
6LSG
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BU of 6lsg by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C0S6M form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-3'), ...
Authors:Li, R, Wang, M, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
6LSH
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BU of 6lsh by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C2S6M form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), ...
Authors:Li, R, Wang, M, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.231 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
6AE6
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BU of 6ae6 by Molmil
Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A mutant, form 2)
Descriptor: ACETATE ION, RdRp catalytic
Authors:Liu, W, Gong, P.
Deposit date:2018-08-03
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.856 Å)
Cite:A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase.
Nucleic Acids Res., 46, 2018
6ADX
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BU of 6adx by Molmil
Crystal structure of the Zika virus NS3 helicase (ADP-Mn2+ complex, form 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, Serine protease NS3
Authors:Fang, J, Lu, G, Gong, P.
Deposit date:2018-08-02
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Crystallographic Snapshots of the Zika Virus NS3 Helicase Help Visualize the Reactant Water Replenishment.
ACS Infect Dis, 5, 2019
6ADY
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BU of 6ady by Molmil
Crystal structure of the Zika virus NS3 helicase (ADP-Mn2+ complex, form 2)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, Serine protease NS3
Authors:Fang, J, Lu, G, Gong, P.
Deposit date:2018-08-02
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic Snapshots of the Zika Virus NS3 Helicase Help Visualize the Reactant Water Replenishment.
ACS Infect Dis, 5, 2019
6AE7
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BU of 6ae7 by Molmil
Crystals structure of Classical swine fever virus NS5B (residues 1-672, E472A mutant)
Descriptor: ACETATE ION, RdRp catalytic
Authors:Liu, W, Gong, P.
Deposit date:2018-08-03
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase.
Nucleic Acids Res., 46, 2018

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數據於2024-06-12公開中

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