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3J91
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BU of 3j91 by Molmil
Cryo-electron microscopy of Enterovirus 71 (EV71) procapsid in complex with Fab fragments of neutralizing antibody 22A12
Descriptor: VP0, VP1, VP3
Authors:Shingler, K.L, Cifuente, J.O, Ashley, R.E, Makhov, A.M, Conway, J.F, Hafenstein, S.
Deposit date:2014-11-24
Release date:2014-12-10
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:The enterovirus 71 procapsid binds neutralizing antibodies and rescues virus infection in vitro.
J.Virol., 89, 2015
3JCX
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BU of 3jcx by Molmil
Canine Parvovirus complexed with Fab E
Descriptor: Capsid protein 2, Fab E heavy chain, Fab E light chain
Authors:Organtini, L.J, Iketani, S, Huang, K, Ashley, R.E, Makhov, A.M, Conway, J.F, Parrish, C.R, Hafenstein, S.
Deposit date:2016-03-21
Release date:2016-07-20
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Near-Atomic Resolution Structure of a Highly Neutralizing Fab Bound to Canine Parvovirus.
J.Virol., 90, 2016
3JD7
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BU of 3jd7 by Molmil
The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Lee, H, Shingler, K.L, Organtini, L.J, Ashley, R.E, Makhov, A.M, Conway, J.F, Hafenstein, S.
Deposit date:2016-04-29
Release date:2016-09-14
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs.
Sci Adv, 2, 2016
3J6L
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BU of 3j6l by Molmil
Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
Descriptor: Coxsackievirus and adenovirus receptor, SULFATE ION
Authors:Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
Deposit date:2014-03-19
Release date:2014-04-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
3J6N
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BU of 3j6n by Molmil
Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
Descriptor: Coxsackie and adenovirus receptor
Authors:Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
Deposit date:2014-03-19
Release date:2014-04-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
3J93
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BU of 3j93 by Molmil
Fitting of Fab into the cryoEM density map of EV71 procapsid in complex with Fab22A12
Descriptor: neutralizing antibody 22A12, heavy chain, light chain
Authors:Shingler, K.L, Cifuente, J.O, Ashley, R.E, Makhov, A.M, Conway, J.F, Hafenstein, S.
Deposit date:2014-12-02
Release date:2014-12-24
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:The enterovirus 71 procapsid binds neutralizing antibodies and rescues virus infection in vitro.
J.Virol., 89, 2015
8VJN
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BU of 8vjn by Molmil
Myxococcus xanthus encapsulin cargo protein EncD in complex with flavin mononucleotide
Descriptor: Encapsulin nanocompartment cargo protein EncD, FLAVIN MONONUCLEOTIDE
Authors:Eren, E.
Deposit date:2024-01-07
Release date:2024-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Myxococcus xanthus encapsulin cargo protein EncD is a flavin-binding protein with ferric reductase activity.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VJO
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BU of 8vjo by Molmil
Cryo-EM structure of Myxococcus xanthus EncA encapsulin shell loaded with EncD cargo
Descriptor: EncA, Encapsulin nanocompartment cargo protein EncD
Authors:Eren, E.
Deposit date:2024-01-07
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Myxococcus xanthus encapsulin cargo protein EncD is a flavin-binding protein with ferric reductase activity.
Proc.Natl.Acad.Sci.USA, 121, 2024
8CEZ
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BU of 8cez by Molmil
HK97 Portal Protein In situ (prohead II)
Descriptor: Portal protein
Authors:Hawkins, D.E.D.P, Antson, A.A.
Deposit date:2023-02-02
Release date:2023-05-24
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Insights into a viral motor: the structure of the HK97 packaging termination assembly.
Nucleic Acids Res., 51, 2023
8CFA
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BU of 8cfa by Molmil
HK97 Prohead II as part of a DNA packaging complex
Descriptor: Major capsid subunit
Authors:Hawkins, D.E.D.P, Antson, A.A.
Deposit date:2023-02-03
Release date:2023-05-24
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Insights into a viral motor: the structure of the HK97 packaging termination assembly.
Nucleic Acids Res., 51, 2023
5TJT
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BU of 5tjt by Molmil
T5 bacteriophage major capsid protein - one PB8 hexon
Descriptor: Major capsid protein
Authors:Conway, J, Huet, A.
Deposit date:2016-10-05
Release date:2017-02-22
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9 Å)
Cite:High affinity anchoring of the decoration protein pb10 onto the bacteriophage T5 capsid.
Sci Rep, 7, 2017
6Z6E
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BU of 6z6e by Molmil
Crystal structure of the HK97 bacteriophage small terminase
Descriptor: IODIDE ION, Terminase small subunit
Authors:Fung, H.K.H, Chechik, M, Baumann, C.G, Antson, A.A.
Deposit date:2020-05-28
Release date:2021-06-09
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis of DNA packaging by a ring-type ATPase from an archetypal viral system.
Nucleic Acids Res., 50, 2022
6Z6D
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BU of 6z6d by Molmil
Crystal structure of the HK97 bacteriophage large terminase
Descriptor: BROMIDE ION, Terminase large subunit
Authors:Fung, H.K.H, Chechik, M, Baumann, C.G, Antson, A.A.
Deposit date:2020-05-28
Release date:2021-06-09
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of DNA packaging by a ring-type ATPase from an archetypal viral system.
Nucleic Acids Res., 50, 2022
5LXL
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BU of 5lxl by Molmil
NMR structure of the N-terminal domain of the Bacteriophage T5 decoration protein pb10
Descriptor: Decoration protein
Authors:Vernhes, E, Gilquin, B, Cuniasse, P, Boulanger, P, Zinn-Justin, S.
Deposit date:2016-09-22
Release date:2017-04-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:High affinity anchoring of the decoration protein pb10 onto the bacteriophage T5 capsid.
Sci Rep, 7, 2017
5LXK
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BU of 5lxk by Molmil
NMR structure of the C-terminal domain of the Bacteriophage T5 decoration protein pb10.
Descriptor: Decoration protein
Authors:Vernhes, E, Gilquin, B, Cuniasse, P, Boulanger, P, Zinn-Justin, S.
Deposit date:2016-09-22
Release date:2017-08-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:High affinity anchoring of the decoration protein pb10 onto the bacteriophage T5 capsid.
Sci Rep, 7, 2017
4E5Z
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BU of 4e5z by Molmil
Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair
Descriptor: AP24 DNA complementary strand, AP24 DNA strand, DNA damage-binding protein 1, ...
Authors:Yeh, J.I, Du, S.
Deposit date:2012-03-15
Release date:2012-08-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair.
Proc.Natl.Acad.Sci.USA, 109, 2012
4E54
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BU of 4e54 by Molmil
Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair
Descriptor: AP24 DNA complementary strand, AP24 DNA strand, DNA damage-binding protein 1, ...
Authors:Yeh, J.I, Du, S.
Deposit date:2012-03-14
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GMP
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BU of 4gmp by Molmil
Crystal structure of enterovirus 71 strain 1095 procapsid
Descriptor: capsid protein VP0, capsid protein VP1, capsid protein VP3
Authors:Yoder, J.D, Hafenstein, S.
Deposit date:2012-08-16
Release date:2013-05-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structures of the procapsid and mature virion of enterovirus 71 strain 1095.
J.Virol., 87, 2013
1C5E
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BU of 1c5e by Molmil
BACTERIOPHAGE LAMBDA HEAD PROTEIN D
Descriptor: GLYCEROL, HEAD DECORATION PROTEIN
Authors:Yang, F, Forrer, P, Dauter, Z, Pluckthun, A, Wlodawer, A.
Deposit date:1999-11-18
Release date:2000-03-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Novel fold and capsid-binding properties of the lambda-phage display platform protein gpD.
Nat.Struct.Biol., 7, 2000
7M3N
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BU of 7m3n by Molmil
Canine parvovirus and Fab14 asymmetric reconstruction
Descriptor: CPV Fab14 heavy chain, CPV Fab14 light chain, Capsid protein 2
Authors:Goteschius, D.J, Hartmann, S.R, Hafenstein, S.L.
Deposit date:2021-03-18
Release date:2021-07-28
Last modified:2021-08-04
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:High-resolution asymmetric structure of a Fab-virus complex reveals overlap with the receptor binding site.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M3L
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BU of 7m3l by Molmil
Canine parvovirus and Fab14 at partial occupancy
Descriptor: Capsid protein 2, Fab14 Heavy Chain, Fab14 Light Chain
Authors:Goteschius, D.J, Hartmann, S.R, Hafenstein, S.L.
Deposit date:2021-03-18
Release date:2021-07-28
Last modified:2021-08-04
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution asymmetric structure of a Fab-virus complex reveals overlap with the receptor binding site.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M3O
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BU of 7m3o by Molmil
Canine parvovirus asymmetric map
Descriptor: Capsid protein 2
Authors:Goteschius, D.J, Hartmann, S.R, Hafenstein, S.L.
Deposit date:2021-03-18
Release date:2021-07-28
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:High-resolution asymmetric structure of a Fab-virus complex reveals overlap with the receptor binding site.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M3M
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BU of 7m3m by Molmil
Canine parvovirus and Fab14 at partial occupancy
Descriptor: Capsid protein 2
Authors:Goteschius, D.J, Hartmann, S.R, Hafenstein, S.L.
Deposit date:2021-03-18
Release date:2021-07-28
Method:ELECTRON MICROSCOPY (2.26 Å)
Cite:High-resolution asymmetric structure of a Fab-virus complex reveals overlap with the receptor binding site.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MEJ
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BU of 7mej by Molmil
CryoEM structure of SARS-CoV-2 RBD in complex with nanobodies Nb21 and Nb36
Descriptor: Nanobody Nb21, Nanobody Nb36, Spike protein S1
Authors:Huang, W, Taylor, D.J.
Deposit date:2021-04-06
Release date:2021-08-11
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting diverse and conserved epitopes
Nat Commun, 12, 2021
7MDW
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BU of 7mdw by Molmil
CryoEM structure of SARS-CoV-2 RBD in complex with nanobodies Nb21 and Nb105
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, nanobody Nb105, ...
Authors:Huang, W, Taylor, D.J.
Deposit date:2021-04-06
Release date:2021-08-11
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting diverse and conserved epitopes
Nat Commun, 12, 2021

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數據於2024-06-12公開中

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