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8J1Z
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BU of 8j1z by Molmil
The global structure of pre50S related to DbpA in state3
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Yu, T, Zeng, F.
Deposit date:2023-04-13
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:PTC Remodeling in Pre50S Intermediates: Insights into the Role of DEAD-box RNA Helicase DbpA
To Be Published
6IGO
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BU of 6igo by Molmil
Crystal structure of myelin protein zero-like protein 1 (MPZL1)
Descriptor: Myelin protein zero-like protein 1
Authors:Yu, T.
Deposit date:2018-09-25
Release date:2018-11-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.746 Å)
Cite:Structural and biochemical studies of the extracellular domain of Myelin protein zero-like protein 1
Biochem. Biophys. Res. Commun., 506, 2018
6IGT
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BU of 6igt by Molmil
MPZL1 mutant - V145G, Q146K, P147T and G148S
Descriptor: Myelin protein zero-like protein 1
Authors:Yu, T.
Deposit date:2018-09-26
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.404 Å)
Cite:Structural and biochemical studies of the extracellular domain of Myelin protein zero-like protein 1
Biochem. Biophys. Res. Commun., 506, 2018
6IGW
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BU of 6igw by Molmil
MPZL1 mutant - S86G, V145G, Q146K,P147T,G148S
Descriptor: Myelin protein zero-like protein 1
Authors:Yu, T.
Deposit date:2018-09-26
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.979 Å)
Cite:Structural and biochemical studies of the extracellular domain of Myelin protein zero-like protein 1
Biochem. Biophys. Res. Commun., 506, 2018
8KIE
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BU of 8kie by Molmil
Structure of YchF with 50S ribosomal subunit (local map)
Descriptor: 23S rRNA (partial), 50S ribosomal protein L14, 50S ribosomal protein L19, ...
Authors:Yu, T, Li, X, Zeng, F.
Deposit date:2023-08-23
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structure basis of translation regulation by YchF bound to ribosome
To Be Published
8W51
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BU of 8w51 by Molmil
Structure of YchF(H114A) on E.coli 50S ribosomal subunit
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Yu, T, Li, X, Zeng, F.
Deposit date:2023-08-25
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structure basis of translation regulation by YchF bound to ribosome
To Be Published
2MLK
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BU of 2mlk by Molmil
Three-dimensional structure of the C-terminal DNA-binding domain of RstA protein from Klebsiella pneumoniae
Descriptor: RstA
Authors:Fang, P, Chen, S, Cheng, Y, Chang, C, Yu, T, Huang, T.
Deposit date:2014-03-02
Release date:2014-07-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural dynamics of the two-component response regulator RstA in recognition of promoter DNA element.
Nucleic Acids Res., 42, 2014
4Y3I
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BU of 4y3i by Molmil
PAS-GAF fragment from Deinococcus radiodurans BphP assembled with BV - Y307S, low dose
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
Authors:Li, F, Burgie, E.S, Yu, T, Heroux, A, Schatz, G.C, Vierstra, R.D, Orville, A.M.
Deposit date:2015-02-10
Release date:2015-05-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:X-ray radiation induces deprotonation of the bilin chromophore in crystalline D. radiodurans phytochrome.
J.Am.Chem.Soc., 137, 2015
4Y5F
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BU of 4y5f by Molmil
PAS-GAF fragment from Deinococcus radiodurans BphP assembled with BV - Y307S, high dose
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
Authors:Li, F, Burgie, E.S, Yu, T, Heroux, A, Schatz, G.C, Vierstra, R.D, Orville, A.M.
Deposit date:2015-02-11
Release date:2015-05-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray radiation induces deprotonation of the bilin chromophore in crystalline D. radiodurans phytochrome.
J.Am.Chem.Soc., 137, 2015
6INE
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BU of 6ine by Molmil
Crystal Structure of human ASH1L-MRG15 complex
Descriptor: GLYCEROL, Histone-lysine N-methyltransferase ASH1L, Mortality factor 4-like protein 1, ...
Authors:Hou, P, Huang, C, Liu, C.P, Yu, T, Yin, Y, Zhu, B, Xu, R.M.
Deposit date:2018-10-25
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Insights into Stimulation of Ash1L's H3K36 Methyltransferase Activity through Mrg15 Binding.
Structure, 27, 2019
8A6M
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BU of 8a6m by Molmil
Phosphatidylserine-dependent synaptic vesicle membrane sculpting by synaptogyrin
Descriptor: Isoform 1B of Synaptogyrin-1
Authors:Yu, T.K, Eastep, G.N, Flores, D, Zweckstetter, M.
Deposit date:2022-06-18
Release date:2023-05-24
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Phosphatidylserine-dependent structure of synaptogyrin remodels the synaptic vesicle membrane.
Nat.Struct.Mol.Biol., 30, 2023
4CXO
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BU of 4cxo by Molmil
bifunctional endonuclease in complex with ssDNA
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, ENDONUCLEASE 2, SULFATE ION, ...
Authors:Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J.
Deposit date:2014-04-08
Release date:2014-07-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana.
Plos One, 9, 2014
4CXV
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BU of 4cxv by Molmil
Structure of bifunctional endonuclease (AtBFN2) in complex with phosphate.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDONUCLEASE 2, ...
Authors:Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J.
Deposit date:2014-04-09
Release date:2014-07-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana.
Plos One, 9, 2014
4CXP
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BU of 4cxp by Molmil
Structure of bifunctional endonuclease (AtBFN2) from Arabidopsis thaliana in complex with sulfate
Descriptor: ENDONUCLEASE 2, PENTAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J.
Deposit date:2014-04-08
Release date:2014-07-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana.
Plos One, 9, 2014
4CWM
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BU of 4cwm by Molmil
High-glycosylation crystal structure of the bifunctional endonuclease (AtBFN2) from Arabidopsis thaliana
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDONUCLEASE 2, ZINC ION, ...
Authors:Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J.
Deposit date:2014-04-03
Release date:2014-07-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana.
Plos One, 9, 2014
3MYG
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BU of 3myg by Molmil
Aurora A Kinase complexed with SCH 1473759
Descriptor: 2-{ethyl[(5-{[6-methyl-3-(1H-pyrazol-4-yl)imidazo[1,2-a]pyrazin-8-yl]amino}isothiazol-3-yl)methyl]amino}-2-methylpropan-1-ol, Serine/threonine-protein kinase 6, TETRAETHYLENE GLYCOL
Authors:Hruza, A, Prosis, W, Ramanathan, L.
Deposit date:2010-05-10
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of a Potent, Injectable Inhibitor of Aurora Kinases Based on the Imidazo-[1,2-a]-Pyrazine Core.
ACS Med Chem Lett, 1, 2010
7YDG
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BU of 7ydg by Molmil
Crystal structure of human SARS2 catalytic domain with a disease related mutation
Descriptor: Serine--tRNA ligase, mitochondrial
Authors:Wu, S, Li, P, Zhou, X.L, Fang, P.
Deposit date:2022-07-04
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Selective degradation of tRNASer(AGY) is the primary driver for mitochondrial seryl-tRNA synthetase-related disease.
Nucleic Acids Res., 50, 2022
7YDF
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BU of 7ydf by Molmil
Crystal structure of human SARS2 catalytic domain
Descriptor: Serine--tRNA ligase, mitochondrial
Authors:Wu, S, Li, P, Zhou, X.L, Fang, P.
Deposit date:2022-07-04
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Selective degradation of tRNASer(AGY) is the primary driver for mitochondrial seryl-tRNA synthetase-related disease.
Nucleic Acids Res., 50, 2022
4FFV
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BU of 4ffv by Molmil
Crystal Structure of Dipeptidyl Peptidase IV (DPP4, DPP-IV, CD26) in Complex with 11A19 Fab
Descriptor: 11A19 Fab heavy chain, 11A19 Fab light chain, Dipeptidyl peptidase 4
Authors:Wang, Z, Sudom, A, Walker, N.P, Min, X.
Deposit date:2012-06-01
Release date:2012-12-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An Inhibitory Antibody Against DPP IV Improves Glucose Tolerance in vivo - Validation of Large Molecule Approach for DPP IV Inhibition
To be published
2W4C
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BU of 2w4c by Molmil
Human common-type acylphosphatase variant, A99
Descriptor: ACYLPHOSPHATASE-1
Authors:Lam, S.Y, Wong, K.B.
Deposit date:2008-11-25
Release date:2009-12-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:A Rigidifying Salt-Bridge Favors the Activity of Thermophilic Enzyme at High Temperatures at the Expense of Low-Temperature Activity.
Plos Biol., 9, 2011
2W4D
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BU of 2w4d by Molmil
Acylphosphatase variant G91A from Pyrococcus horikoshii
Descriptor: ACYLPHOSPHATASE, PHOSPHATE ION, POTASSIUM ION
Authors:Lam, S.Y, Wong, K.B.
Deposit date:2008-11-25
Release date:2009-12-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Rigidifying Salt-Bridge Favors the Activity of Thermophilic Enzyme at High Temperatures at the Expense of Low-Temperature Activity.
Plos Biol., 9, 2011
2VH7
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BU of 2vh7 by Molmil
Crystal structure of human common-type acylphosphatase
Descriptor: ACYLPHOSPHATASE-1
Authors:Yeung, R.C.Y, Lam, Y, Wong, K.B.
Deposit date:2007-11-19
Release date:2009-03-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Rigidifying Salt-Bridge Favors the Activity of Thermophilic Enzyme at High Temperatures at the Expense of Low-Temperature Activity.
Plos Biol., 9, 2011
2W4P
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BU of 2w4p by Molmil
Human common-type acylphosphatase variant, A99G
Descriptor: ACYLPHOSPHATASE-1, GLYCEROL
Authors:Lam, S.Y, Sze, K.H, Wong, K.B.
Deposit date:2008-11-29
Release date:2009-12-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Rigidifying Salt-Bridge Favors the Activity of Thermophilic Enzyme at High Temperatures at the Expense of Low-Temperature Activity.
Plos Biol., 9, 2011
7N8T
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BU of 7n8t by Molmil
Crystal Structure of AMP-bound Human JNK2
Descriptor: ADENOSINE MONOPHOSPHATE, HEXAETHYLENE GLYCOL, Mitogen-activated protein kinase 9
Authors:Li, L, Gurbani, D, Westover, K.D.
Deposit date:2021-06-15
Release date:2022-06-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Development of a Covalent Inhibitor of c-Jun N-Terminal Protein Kinase (JNK) 2/3 with Selectivity over JNK1.
J.Med.Chem., 66, 2023
6K11
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BU of 6k11 by Molmil
Crystal structure of MvcA from Legionella pneumophila
Descriptor: Lpg2148(MvcA)
Authors:Ouyang, S, Guan, H.
Deposit date:2019-05-09
Release date:2019-12-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.936 Å)
Cite:Legionella pneumophila regulates the activity of UBE2N by deamidase-mediated deubiquitination.
Embo J., 39, 2020

 

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