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3PLC
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BU of 3plc by Molmil
Crystal structure of Beta-Cardiotoxin, a novel three-finger cardiotoxin from the venom of Ophiophagus hannah
Descriptor: Beta-cardiotoxin OH-27
Authors:Roy, A, Qingxiang, S, Kini, R.M, Sivaraman, J.
Deposit date:2010-11-15
Release date:2011-11-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Identification of a alpha-helical molten globule intermediate and structural characterization of beta-cardiotoxin, an all beta-sheet protein isolated from the venom of Ophiophagus hannah (king cobra).
Protein Sci., 28, 2019
3HH7
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BU of 3hh7 by Molmil
Structural and Functional Characterization of a Novel Homodimeric Three-finger Neurotoxin from the Venom of Ophiophagus hannah (King Cobra)
Descriptor: Muscarinic toxin-like protein 3 homolog
Authors:Roy, A, Zhou, X, Chong, M.Z, D'hoedt, D, Foo, C.S, Rajagopalan, N, Nirthanan, S, Bertrand, D, Sivaraman, J, Kini, R.M.
Deposit date:2009-05-15
Release date:2010-01-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural and Functional Characterization of a Novel Homodimeric Three-finger Neurotoxin from the Venom of Ophiophagus hannah (King Cobra)
J.Biol.Chem., 285, 2010
4DKW
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BU of 4dkw by Molmil
Structure of P22 Large terminase nuclease domain
Descriptor: Large terminase protein, MAGNESIUM ION, SULFATE ION
Authors:Roy, A, Cingolani, G.
Deposit date:2012-02-04
Release date:2012-06-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structure of p22 headful packaging nuclease.
J.Biol.Chem., 287, 2012
4MY4
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BU of 4my4 by Molmil
Crystal structure of phosphoglycerate mutase from Staphylococcus aureus.
Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, MANGANESE (II) ION
Authors:Roychowdhury, A, Kundu, A, Gujar, A, Bose, M, Das, A.K.
Deposit date:2013-09-27
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Complete catalytic cycle of cofactor-independent phosphoglycerate mutase involves a spring-loaded mechanism
Febs J., 282, 2015
4QAX
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BU of 4qax by Molmil
Crystal structure of post-catalytic binary complex of Phosphoglycerate mutase from Staphylococcus aureus
Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, 2-PHOSPHOGLYCERIC ACID, MANGANESE (II) ION
Authors:Roychowdhury, A, Kundu, A, Bose, M, Gujar, A, Das, A.K.
Deposit date:2014-05-06
Release date:2015-05-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:STRUCTURAL AND FUNCCTIONAL ANALYSIS of PHOSPHOGLYCERATE MUTASE from STAPHYLOCOCCUS AUREUS
To be Published
4NWJ
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BU of 4nwj by Molmil
Crystal structure of phosphopglycerate mutase from Staphylococcus aureus in 3-phosphoglyceric acid bound form.
Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, 3-PHOSPHOGLYCERIC ACID, MANGANESE (II) ION
Authors:Roychowdhury, A, Bose, M, Kundu, A, Gujar, A, Das, A.K.
Deposit date:2013-12-06
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Complete catalytic cycle of cofactor-independent phosphoglycerate mutase involves a spring-loaded mechanism
Febs J., 282, 2015
4NWX
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BU of 4nwx by Molmil
Crystal structure of phosphoglycerate mutase from Staphylococcus aureus in 2-phosphoglyceric acid bound form
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, 2-PHOSPHOGLYCERIC ACID, ...
Authors:Roychowdhury, A, Kundu, A, Bose, M, Gujar, A, Das, A.K.
Deposit date:2013-12-07
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Complete catalytic cycle of cofactor-independent phosphoglycerate mutase involves a spring-loaded mechanism
Febs J., 282, 2015
1IO2
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BU of 1io2 by Molmil
Crystal structure of type 2 ribonuclease h from hyperthermophilic archaeon, thermococcus kodakaraensis kod1
Descriptor: RIBONUCLEASE HII
Authors:Muroya, A, Tsuchiya, D, Ishikawa, M, Haruki, M, Morikawa, M.
Deposit date:2000-12-28
Release date:2001-04-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Catalytic center of an archaeal type 2 ribonuclease H as revealed by X-ray crystallographic and mutational analyses.
Protein Sci., 10, 2001
1E0P
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BU of 1e0p by Molmil
L intermediate of bacteriorhodopsin
Descriptor: BACTERIORHODOPSIN, GROUND STATE, RETINAL
Authors:Royant, A, Edman, K, Ursby, T, Pebay-Peyroula, E, Landau, E.M, Neutze, R.
Deposit date:2000-04-04
Release date:2000-08-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Helix Deformation is Coupled to Vectorial Proton Transport in Bacteriorhodopsin'S Photocycle
Nature, 406, 2000
1H68
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BU of 1h68 by Molmil
sensory rhodopsin II
Descriptor: CHLORIDE ION, RETINAL, SENSORY RHODOPSIN II
Authors:Royant, A, Nollert, P, Edman, K, Neutze, R, Landau, E.M, Pebay-Peyroula, E, Navarro, J.
Deposit date:2001-06-08
Release date:2001-08-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-Ray Structure of Sensory Rhodopsin II at 2.1 A Resolution
Proc.Natl.Acad.Sci.USA, 98, 2001
6H57
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BU of 6h57 by Molmil
Crystal structure of S. cerevisiae DEAH-box RNA helicase Dhr1, essential for small ribosomal subunit biogenesis
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Roychowdhury, A, Graille, M.
Deposit date:2018-07-24
Release date:2019-06-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The DEAH-box RNA helicase Dhr1 contains a remarkable carboxyl terminal domain essential for small ribosomal subunit biogenesis.
Nucleic Acids Res., 47, 2019
2Y0G
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BU of 2y0g by Molmil
X-ray structure of Enhanced Green Fluorescent Protein (EGFP)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Royant, A, Noirclerc-Savoye, M.
Deposit date:2010-12-02
Release date:2011-04-27
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Stabilizing Role of Glutamic Acid 222 in the Structure of Enhanced Green Fluorescent Protein.
J.Struct.Biol., 174, 2011
3VAZ
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BU of 3vaz by Molmil
Crystal structure of Staphylococcal GAPDH1 in a hexagonal space group
Descriptor: (2R)-2,3-DIHYDROXYPROPANOIC ACID, Glyceraldehyde-3-phosphate dehydrogenase 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Roychowdhury, A, Mukherjee, S, Dutta, D, Das, A.K.
Deposit date:2011-12-30
Release date:2013-01-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Crystal structure of Staphylococcal GAPDH1 in a hexagonal space group
To be Published
4DG5
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BU of 4dg5 by Molmil
Crystal structure of staphylococcal Phosphoglycerate kinase
Descriptor: Phosphoglycerate kinase
Authors:Roychowdhury, A, Mukherjee, S, Dutta, D, Das, A.K.
Deposit date:2012-01-25
Release date:2013-01-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure based functional analysis of Staphylococcal Phosphoglycerate kinase
To be Published
8TCG
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BU of 8tcg by Molmil
Integrin alpha-v beta-6 in complex with minibinder B6_BP_dslf
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Integrin alpha-V heavy chain, ...
Authors:Campbell, M.G, Fernandez, A, Roy, A, Kraft, J, Baker, D.
Deposit date:2023-06-30
Release date:2023-09-27
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:De novo design of highly selective miniprotein inhibitors of integrins alpha v beta 6 and alpha v beta 8.
Nat Commun, 14, 2023
8TCF
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BU of 8tcf by Molmil
Integrin alpha-v beta-8 in complex with minibinder B8_BP_dsulf
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Campbell, M.G, Fernandez, A, Roy, A, Kraft, J, Baker, D.
Deposit date:2023-06-30
Release date:2023-09-27
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:De novo design of highly selective miniprotein inhibitors of integrins alpha v beta 6 and alpha v beta 8.
Nat Commun, 14, 2023
7LMX
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BU of 7lmx by Molmil
A HIGHLY SPECIFIC INHIBITOR OF INTEGRIN ALPHA-V BETA-6 WITH A DISULFIDE
Descriptor: Integrin inhibitor
Authors:Dong, X, Bera, A.K, Roy, A, Shi, L, Springer, T.A, Baker, D.
Deposit date:2021-02-06
Release date:2022-08-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:De novo design of highly selective miniprotein inhibitors of integrins alpha v beta 6 and alpha v beta 8.
Nat Commun, 14, 2023
7LMV
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BU of 7lmv by Molmil
SPECIFIC INHIBITOR OF INTEGRIN ALPHA-V BETA-6
Descriptor: Integrin inhibitor
Authors:Dong, X, Bera, A.K, Roy, A, Shi, L, Springer, T.A, Baker, D.
Deposit date:2021-02-05
Release date:2022-08-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:De novo design of highly selective miniprotein inhibitors of integrins alpha v beta 6 and alpha v beta 8.
Nat Commun, 14, 2023
5VCQ
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BU of 5vcq by Molmil
A Hyrdrogen Producing Hybrid Streptavidin-Diiron Catalyst
Descriptor: 2-methylpropyl 5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoate, Streptavidin
Authors:Simmons, C.R, Roy, A, Vaughn, M.D, Allen, J.P, Ghirlanda, G.
Deposit date:2017-03-31
Release date:2018-04-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Enhanced Photocatalytic Hydrogen Production by Hybrid Streptavidin-Diiron Catalysts
To Be Published
3P9A
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BU of 3p9a by Molmil
An atomic view of the nonameric small terminase subunit of Bacteriophage P22
Descriptor: DNA-packaging protein gp3
Authors:Bhardwaj, A, Roy, A, Cingolani, G.
Deposit date:2010-10-17
Release date:2012-05-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.755 Å)
Cite:Small terminase couples viral DNA binding to genome-packaging ATPase activity.
Structure, 20, 2012
3TMT
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BU of 3tmt by Molmil
IrisFP, distorted chromophore
Descriptor: Green to red photoconvertible GPF-like protein EosFP, SULFATE ION
Authors:Adam, V, Carpentier, P, Roy, A, Field, M, Bourgeois, D.
Deposit date:2011-08-31
Release date:2011-11-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The nature of transient dark States in a photoactivatable fluorescent protein.
J.Am.Chem.Soc., 133, 2011
3TMR
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BU of 3tmr by Molmil
IrisFP, planar chromophore
Descriptor: Green to red photoconvertible GPF-like protein EosFP, SULFATE ION, SULFITE ION
Authors:Adam, V, Carpentier, P, Roy, A, Field, M, Bourgeois, D.
Deposit date:2011-08-31
Release date:2011-11-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The nature of transient dark States in a photoactivatable fluorescent protein.
J.Am.Chem.Soc., 133, 2011
5H2L
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BU of 5h2l by Molmil
A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 5.25 us after photoexcitation
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ...
Authors:Royant, A, Nango, E, Nakane, T, Tanaka, T, Arima, T, Neutze, R, Iwata, S.
Deposit date:2016-10-15
Release date:2016-12-21
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A three-dimensional movie of structural changes in bacteriorhodopsin
Science, 354, 2016
5H2O
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BU of 5h2o by Molmil
A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 250 us after photoexcitation
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ...
Authors:Royant, A, Nango, E, Nakane, T, Tanaka, T, Arima, T, Neutze, R, Iwata, S.
Deposit date:2016-10-15
Release date:2016-12-21
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A three-dimensional movie of structural changes in bacteriorhodopsin
Science, 354, 2016
5H2N
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BU of 5h2n by Molmil
A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 95.2 us after photoexcitation
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ...
Authors:Royant, A, Nango, E, Nakane, T, Tanaka, T, Arima, T, Neutze, R, Iwata, S.
Deposit date:2016-10-15
Release date:2016-12-21
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A three-dimensional movie of structural changes in bacteriorhodopsin
Science, 354, 2016

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