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3VWC
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BU of 3vwc by Molmil
High resolution structure of proteinase inhibitor from Coprinopsis cinerea
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Serine protease inhibitor 1
Authors:Renko, M, Sabotic, J, Turk, D.
Deposit date:2012-08-22
Release date:2012-09-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High resolution structure of proteinase inhibitor from Coprinopsis cinerea
To be Published
7ZNX
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BU of 7znx by Molmil
Crystal structure of cocaprin 1, inhibitor of cysteine and aspartic proteases from Coprinopsis cinerea
Descriptor: Cocaprin 1
Authors:Renko, M, Turk, D, Sabotic, J.
Deposit date:2022-04-22
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cocaprins, beta-Trefoil Fold Inhibitors of Cysteine and Aspartic Proteases from Coprinopsis cinerea.
Int J Mol Sci, 23, 2022
3H6R
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BU of 3h6r by Molmil
Clitocypin, a beta-trefoil cysteine protease inhibitor
Descriptor: Clitocypin analog
Authors:Renko, M, Sabotic, J, Brzin, J, Turk, D.
Deposit date:2009-04-23
Release date:2009-10-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Versatile loops in mycocypins inhibit three protease families.
J.Biol.Chem., 285, 2010
3H6Q
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BU of 3h6q by Molmil
Macrocypin, a beta-trefoil cysteine protease inhibitor
Descriptor: Macrocypin 1a
Authors:Renko, M, Sabotic, J, Brzin, J, Turk, D.
Deposit date:2009-04-23
Release date:2009-10-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.643 Å)
Cite:Versatile loops in mycocypins inhibit three protease families.
J.Biol.Chem., 285, 2010
3H6S
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BU of 3h6s by Molmil
Structure of clitocypin - cathepsin V complex
Descriptor: Cathepsin L2, Clitocypin analog, SULFATE ION
Authors:Renko, M, Sabotic, J, Brzin, J, Turk, D.
Deposit date:2009-04-23
Release date:2009-10-20
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Versatile loops in mycocypins inhibit three protease families.
J.Biol.Chem., 285, 2010
3K9M
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BU of 3k9m by Molmil
Cathepsin B in complex with stefin A
Descriptor: Cathepsin B, Cystatin-A
Authors:Renko, M, Turk, D.
Deposit date:2009-10-16
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Stefin A displaces the occluding loop of cathepsin B only by as much as required to bind to the active site cleft
Febs J., 277, 2010
4N6V
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BU of 4n6v by Molmil
Partial rotational order disorder structure of human stefin B
Descriptor: Cystatin-B, SULFATE ION
Authors:Renko, M, Taler-Vercic, A, Mihelic, M, Zerovnik, E, Turk, D.
Deposit date:2013-10-14
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Partial rotational lattice order-disorder in stefin B crystals.
Acta Crystallogr.,Sect.D, 70, 2014
4ION
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BU of 4ion by Molmil
Macrolepiota procera ricin B-like lectin (MPL)
Descriptor: GLYCEROL, Ricin B-like lectin
Authors:Renko, M, Zurga, S, Sabotic, J, Pohleven, J, Kos, J, Turk, D.
Deposit date:2013-01-08
Release date:2013-11-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Macrolepiota procera ricin B-like lectin (MPL)
TO BE PUBLISHED
4J2S
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BU of 4j2s by Molmil
Macrolepiota procera ricin B-like lectin (MPL) in complex with Di-LacNAc
Descriptor: BENZAMIDINE, Ricin B-like lectin, beta-D-galactopyranose-(1-4)-methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside
Authors:Renko, M, Zurga, S, Sabotic, J, Pohleven, J, Kos, J, Turk, D.
Deposit date:2013-02-05
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Macrolepiota procera ricin B-like lectin (MPL) in complex with Di-LacNAc
To be Published
4IZX
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BU of 4izx by Molmil
Macrolepiota procera ricin B-like lectin (MPL) in complex with lactose
Descriptor: BENZAMIDINE, Ricin B-like lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Renko, M, Zurga, S, Sabotic, J, Pohleven, J, Kos, J, Turk, D.
Deposit date:2013-01-30
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Macrolepiota procera ricin B-like lectin (MPL) in complex with lactose
To be Published
4IYB
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BU of 4iyb by Molmil
Macrolepiota procera ricin B-like lectin (MPL) in complex with galactose
Descriptor: GLYCEROL, Ricin B-like lectin, beta-D-galactopyranose
Authors:Renko, M, Zurga, S, Sabotic, J, Pohleven, J, Kos, J, Turk, D.
Deposit date:2013-01-28
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Macrolepiota procera ricin B-like lectin (MPL) in complex with galactose
To be Published
6S9R
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BU of 6s9r by Molmil
Crystal structure of SSDP from D. melanogaster
Descriptor: Sequence-specific single-stranded DNA-binding protein, isoform A
Authors:Renko, M, Bienz, M.
Deposit date:2019-07-15
Release date:2019-10-09
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome.
Proc.Natl.Acad.Sci.USA, 116, 2019
6S9T
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BU of 6s9t by Molmil
Dimerization domain of Xenopus laevis LDB1 in complex with darpin 3
Descriptor: Darpin 3, LIM domain-binding protein 1, TETRAETHYLENE GLYCOL
Authors:Renko, M, Schaefer, J.V, Pluckthun, A, Bienz, M.
Deposit date:2019-07-15
Release date:2019-10-09
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome.
Proc.Natl.Acad.Sci.USA, 116, 2019
6S9S
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BU of 6s9s by Molmil
Dimerization domain of Xenopus laevis LDB1 in complex with darpin 10
Descriptor: Darpin 10, LIM domain-binding protein 1
Authors:Renko, M, Schaefer, J.V, Pluckthun, A, Bienz, M.
Deposit date:2019-07-15
Release date:2019-10-09
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome.
Proc.Natl.Acad.Sci.USA, 116, 2019
3KFQ
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BU of 3kfq by Molmil
Unreduced cathepsin V in complex with stefin A
Descriptor: Cathepsin L2, Cystatin-A
Authors:Renko, M, Turk, D.
Deposit date:2009-10-27
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Unreduced cathepsin V in complex with stefin A
To be Published
3KSE
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BU of 3kse by Molmil
Unreduced cathepsin L in complex with stefin A
Descriptor: Cathepsin L1, Cystatin-A
Authors:Renko, M, Turk, D.
Deposit date:2009-11-22
Release date:2010-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Unreduced cathepsin L in complex with stefin A
To be Published
5J72
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BU of 5j72 by Molmil
Cwp6 from Clostridium difficile
Descriptor: CALCIUM ION, CHLORIDE ION, CITRIC ACID, ...
Authors:Renko, M, Usenik, A, Turk, D.
Deposit date:2016-04-05
Release date:2017-02-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The CWB2 Cell Wall-Anchoring Module Is Revealed by the Crystal Structures of the Clostridium difficile Cell Wall Proteins Cwp8 and Cwp6.
Structure, 25, 2017
5J6Q
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BU of 5j6q by Molmil
Cwp8 from Clostridium difficile
Descriptor: CHLORIDE ION, Cell wall binding protein cwp8, SULFATE ION
Authors:Renko, M, Usenik, A, Turk, D.
Deposit date:2016-04-05
Release date:2017-02-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The CWB2 Cell Wall-Anchoring Module Is Revealed by the Crystal Structures of the Clostridium difficile Cell Wall Proteins Cwp8 and Cwp6.
Structure, 25, 2017
5SUY
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BU of 5suy by Molmil
Domain-swapped dimer of human Dishevelled2 DEP domain: monoclinic crystal form crystallised from dimeric fraction
Descriptor: SULFATE ION, Segment polarity protein dishevelled homolog DVL-2
Authors:Renko, M, Gammons, M.V, Bienz, M.
Deposit date:2016-08-04
Release date:2016-10-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Wnt Signalosome Assembly by DEP Domain Swapping of Dishevelled.
Mol.Cell, 64, 2016
5SUZ
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BU of 5suz by Molmil
Domain-swapped dimer of human Dishevelled2 DEP domain: C-centered monoclinic crystal form crystallised from monomeric fraction
Descriptor: Segment polarity protein dishevelled homolog DVL-2
Authors:Renko, M, Gammons, M.V, Bienz, M.
Deposit date:2016-08-04
Release date:2016-10-12
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Wnt Signalosome Assembly by DEP Domain Swapping of Dishevelled.
Mol.Cell, 64, 2016
3AI8
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BU of 3ai8 by Molmil
Cathepsin B in complex with the nitroxoline
Descriptor: 5-nitroquinolin-8-ol, Cathepsin B
Authors:Renko, M, Mirkovic, B, Gobec, S, Kos, J, Turk, D.
Deposit date:2010-05-11
Release date:2011-05-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Novel mechanism of cathepsin B inhibition by antibiotic nitroxoline and related compounds
Chemmedchem, 6, 2011
3N0K
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BU of 3n0k by Molmil
Proteinase inhibitor from Coprinopsis cinerea
Descriptor: Serine protease inhibitor 1
Authors:Renko, M, Sabotic, J, Bleuler-Martinez, S, Kallert, S, Avanzo, P, Kos, J, Aebi, M, Kuenzler, M, Turk, D.
Deposit date:2010-05-14
Release date:2011-06-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of Trypsin Inhibition and Entomotoxicity of Cospin, Serine Protease Inhibitor Involved in Defense of Coprinopsis cinerea Fruiting Bodies.
J.Biol.Chem., 287, 2012
3NBE
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BU of 3nbe by Molmil
Clitocybe nebularis ricin B-like lectin (CNL) in complex with N,N'-diacetyllactosediamine
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-2-azidoethyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, Ricin B-like lectin, SULFATE ION
Authors:Renko, M, Pohleven, J, Sabotic, J, Kos, J, Turk, D.
Deposit date:2010-06-03
Release date:2011-07-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Bivalent carbohydrate binding is required for biological activity of Clitocybe nebularis lectin (CNL), the N,N'-diacetyllactosediamine (GalNAc beta 1-4GlcNAc, LacdiNAc)-specific lectin from basidiomycete C. nebularis
J.Biol.Chem., 287, 2012
3NBD
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BU of 3nbd by Molmil
Clitocybe nebularis ricin B-like lectin (CNL) in complex with lactose, crystallized at pH 7.1
Descriptor: Ricin B-like lectin, SULFATE ION, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Renko, M, Pohleven, J, Sabotic, J, Kos, J, Turk, D.
Deposit date:2010-06-03
Release date:2011-09-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Bivalent carbohydrate binding is required for biological activity of Clitocybe nebularis lectin (CNL), the N,N'-diacetyllactosediamine (GalNAc beta 1-4GlcNAc, LacdiNAc)-specific lectin from basidiomycete C. nebularis
J.Biol.Chem., 287, 2012
3NBC
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BU of 3nbc by Molmil
Clitocybe nebularis ricin B-like lectin (CNL) in complex with lactose, crystallized at pH 4.4
Descriptor: Ricin B-like lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Renko, M, Pohleven, J, Sabotic, J, Kos, J, Turk, D.
Deposit date:2010-06-03
Release date:2011-09-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Bivalent carbohydrate binding is required for biological activity of Clitocybe nebularis lectin (CNL), the N,N'-diacetyllactosediamine (GalNAc beta 1-4GlcNAc, LacdiNAc)-specific lectin from basidiomycete C. nebularis
J.Biol.Chem., 287, 2012

 

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