Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
179D
DownloadVisualize
BU of 179d by Molmil
SOLUTION STRUCTURE OF THE D(T-C-G-A) DUPLEX AT ACIDIC PH: A PARALLEL-STRANDED HELIX CONTAINING C+.C, G.G AND A.A PAIRS
Descriptor: DNA (5'-D(*TP*CP*GP*A)-3')
Authors:Wang, Y, Patel, D.J.
Deposit date:1994-06-15
Release date:1994-07-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the d(T-C-G-A) duplex at acidic pH. A parallel-stranded helix containing C+ .C, G.G and A.A pairs.
J.Mol.Biol., 242, 1994
186D
DownloadVisualize
BU of 186d by Molmil
SOLUTION STRUCTURE OF THE TETRAHYMENA TELOMERIC REPEAT D(T2G4)4 G-TETRAPLEX
Descriptor: DNA (5'-D(*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*G)-3')
Authors:Wang, Y, Patel, D.J.
Deposit date:1994-08-22
Release date:1994-11-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the Tetrahymena telomeric repeat d(T2G4)4 G-tetraplex.
Structure, 2, 1994
2K48
DownloadVisualize
BU of 2k48 by Molmil
NMR Structure of the N-terminal Coiled Coil Domain of the Andes Hantavirus Nucleocapsid Protein
Descriptor: Nucleoprotein
Authors:Wang, Y, Boudreaux, D.M, Estrada, D.F, Egan, C.W, St Jeor, S.C, De Guzman, R.N.
Deposit date:2008-05-30
Release date:2008-08-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR Structure of the N-terminal Coiled Coil Domain of the Andes Hantavirus Nucleocapsid Protein.
J.Biol.Chem., 283, 2008
2M5I
DownloadVisualize
BU of 2m5i by Molmil
NMR structures of human apoptotic protein tBid in LPPG micelle
Descriptor: BH3-interacting domain death agonist
Authors:Wang, Y, Tjandra, N.
Deposit date:2013-02-25
Release date:2013-11-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights of tBid, the Caspase-8-activated Bid, and Its BH3 Domain.
J.Biol.Chem., 288, 2013
2OCJ
DownloadVisualize
BU of 2ocj by Molmil
Human p53 core domain in the absence of DNA
Descriptor: P53 TUMOR SUPPRESSOR, ZINC ION
Authors:Wang, Y, Rosengarth, A, Luecke, H.
Deposit date:2006-12-20
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the human p53 core domain in the absence of DNA.
Acta Crystallogr.,Sect.D, 63, 2007
5W87
DownloadVisualize
BU of 5w87 by Molmil
Crystal structure of the C-terminal lobe of the human HERC6 HECT domain
Descriptor: PHOSPHATE ION, Probable E3 ubiquitin-protein ligase HERC6
Authors:WANG, Y, BELLESIS, A.G, ROYER, W.E, SPRATT, D.E.
Deposit date:2017-06-21
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Crystal structure of the C-terminal lobe of the human HERC6 HECT domain
To Be Published
5WYI
DownloadVisualize
BU of 5wyi by Molmil
The Yaf9 YEATS domain Recognizing H3K122suc Peptide
Descriptor: (2S)-2-azanyl-6-[(4-hydroxy-4-oxo-butanoyl)amino]hexanoic acid, ILE-MET-PRO-LYS-ASP-ILE-GLN-LEU, SUCCINIC ACID, ...
Authors:Wang, Y, Hao, Q.
Deposit date:2017-01-13
Release date:2018-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Yaf9 YEATS domain Recognizing H3K122suc Peptide
To Be Published
5Y8V
DownloadVisualize
BU of 5y8v by Molmil
Crystal structure of GAS41
Descriptor: MAGNESIUM ION, YEATS domain-containing protein 4
Authors:Wang, Y, Hao, Q.
Deposit date:2017-08-21
Release date:2018-04-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Identification of the YEATS domain of GAS41 as a pH-dependent reader of histone succinylation
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7WOH
DownloadVisualize
BU of 7woh by Molmil
SARS-CoV-2 3CLpro
Descriptor: (2S)-4-methyl-N-[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]-2-[[(2S)-3-phenyl-2-[[(E)-3-phenylprop-2-enoyl]amino]propanoyl]amino]pentanamide, 3C-like proteinase
Authors:Wang, Y, Ye, S.
Deposit date:2022-01-21
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
7WOF
DownloadVisualize
BU of 7wof by Molmil
SARS-CoV-2 3CLpro
Descriptor: (2S,3S)-3-methyl-N-[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]-2-[[(E)-3-phenylprop-2-enoyl]amino]pentanamide, 3C-like proteinase
Authors:Wang, Y, Ye, S.
Deposit date:2022-01-21
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
7WO1
DownloadVisualize
BU of 7wo1 by Molmil
Discovery of SARS-CoV-2 3CLpro peptidomimetic inhibitors through H41-specific protein-ligand interactions
Descriptor: 3C-like proteinase, N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene-1-[[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]cyclohexanecarboxamide
Authors:Wang, Y, Ye, S.
Deposit date:2022-01-20
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
7WO3
DownloadVisualize
BU of 7wo3 by Molmil
SARS-CoV-2 3CLpro
Descriptor: (2S)-2-[[(2S)-2-[[(E)-3-(4-methoxyphenyl)prop-2-enoyl]amino]-3-methyl-butanoyl]amino]-4-methyl-N-[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]pentanamide, 3C-like proteinase
Authors:Wang, Y, Ye, S.
Deposit date:2022-01-20
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
7WO2
DownloadVisualize
BU of 7wo2 by Molmil
SARS-CoV-2 3CLPro Peptidomimetic Inhibitor TPM5
Descriptor: 3C-like proteinase, N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene-1-[[(2S)-1-oxidanylidene-3-[(3S}-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]furan-2-carboxamide
Authors:Wang, Y, Ye, S.
Deposit date:2022-01-20
Release date:2022-12-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
7Y3E
DownloadVisualize
BU of 7y3e by Molmil
Cryo-EM structure of Arabidopsis thaliana SOS1 in an occluded state
Descriptor: HEXADECANE, Sodium/hydrogen exchanger 7
Authors:Wang, Y, Zhao, Y, Gao, Y.
Deposit date:2022-06-10
Release date:2023-08-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Architecture and autoinhibitory mechanism of the plasma membrane Na + /H + antiporter SOS1 in Arabidopsis.
Nat Commun, 14, 2023
8HVR
DownloadVisualize
BU of 8hvr by Molmil
Cryo-EM structure of AfsR-dependent transcription activation complex with afsS promoter
Descriptor: DNA (65-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wang, Y, Zheng, J.
Deposit date:2022-12-27
Release date:2023-12-27
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural and functional characterization of AfsR, an SARP family transcriptional activator of antibiotic biosynthesis in Streptomyces.
Plos Biol., 22, 2024
8ITR
DownloadVisualize
BU of 8itr by Molmil
Crystal structure of lysophosphatidylcholine in complex with human serum albumin
Descriptor: Albumin, [1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE
Authors:Wang, Y, Jiang, L.G, Huang, M.D.
Deposit date:2023-03-22
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Crystal structures of human serum albumin in complex with lysophosphatidylcholine.
Biophys.J., 122, 2023
8ITT
DownloadVisualize
BU of 8itt by Molmil
Crystal structure of lysophosphatidylcholine in complex with human serum albumin and myristate
Descriptor: Albumin, MYRISTIC ACID, [1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE
Authors:Wang, Y, Jiang, L.G, Huang, M.D.
Deposit date:2023-03-22
Release date:2024-01-31
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Crystal structures of human serum albumin in complex with lysophosphatidylcholine.
Biophys.J., 122, 2023
8JKE
DownloadVisualize
BU of 8jke by Molmil
AfsR(T337A) transcription activation complex
Descriptor: DNA(65-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wang, Y, Zheng, J.
Deposit date:2023-06-01
Release date:2024-02-14
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structural and functional characterization of AfsR, an SARP family transcriptional activator of antibiotic biosynthesis in Streptomyces.
Plos Biol., 22, 2024
8K1O
DownloadVisualize
BU of 8k1o by Molmil
mycobacterial efflux pump, AMPPNP bound state
Descriptor: CARDIOLIPIN, MAGNESIUM ION, Multidrug efflux system ATP-binding protein Rv1218c, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:mycobacterial efflux pump, AMPPNP bound state
To Be Published
8K1N
DownloadVisualize
BU of 8k1n by Molmil
mycobacterial efflux pump, substrate-bound state
Descriptor: CARDIOLIPIN, Multidrug efflux system ATP-binding protein Rv1218c, Multidrug efflux system permease protein Rv1217c, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:mycobacterial efflux pump, substrate-bound state
To Be Published
8K1M
DownloadVisualize
BU of 8k1m by Molmil
mycobacterial efflux pump, apo state
Descriptor: (1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, CARDIOLIPIN, Multidrug efflux system ATP-binding protein Rv1218c, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:mycobacterial efflux pump, apo state
To Be Published
8K1P
DownloadVisualize
BU of 8k1p by Molmil
mycobacterial efflux pump, ADP+vanadate bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, CARDIOLIPIN, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:mycobacterial efflux pump, ADP+vanadate bound state
To Be Published
8KBY
DownloadVisualize
BU of 8kby by Molmil
Cryo-EM structure of ATG2A
Descriptor: Autophagy-related protein 2 homolog A
Authors:Wang, Y, Stjepanovic, G.
Deposit date:2023-08-04
Release date:2024-08-07
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural basis for lipid transfer by the ATG2A-ATG9A complex.
Nat.Struct.Mol.Biol., 2024
8KBX
DownloadVisualize
BU of 8kbx by Molmil
Cryo-EM structure of human ATG2A-WIPI4 complex
Descriptor: Autophagy-related protein 2 homolog A, WD repeat domain phosphoinositide-interacting protein 4
Authors:Wang, Y, Stjepanovic, G.
Deposit date:2023-08-04
Release date:2024-08-07
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural basis for lipid transfer by the ATG2A-ATG9A complex.
Nat.Struct.Mol.Biol., 2024
8KC3
DownloadVisualize
BU of 8kc3 by Molmil
Cryo-EM structure of human C-terminally bound ATG9A-ATG2A-WIPI4 complex
Descriptor: Autophagy-related protein 2 homolog A, Autophagy-related protein 9A, WD repeat domain phosphoinositide-interacting protein 4
Authors:Wang, Y, Stjepanovic, G.
Deposit date:2023-08-05
Release date:2024-08-07
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural basis for lipid transfer by the ATG2A-ATG9A complex.
Nat.Struct.Mol.Biol., 2024

224931

数据于2024-09-11公开中

PDB statisticsPDBj update infoContact PDBjnumon