Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7WK4
DownloadVisualize
BU of 7wk4 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron spike protein with ACE2, C1 state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Han, W.Y, Wang, Y.F.
Deposit date:2022-01-08
Release date:2022-02-02
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Molecular basis of receptor binding and antibody neutralization of Omicron
Nature, 604, 2022
8HE2
DownloadVisualize
BU of 8he2 by Molmil
The structure of chitin deacetylase Pst_13661 from Puccinia striiformis f. sp. tritici
Descriptor: Chitin deacetylase, ZINC ION, tert-butyl N-[3-[[4-(oxidanylcarbamoyl)phenyl]methylamino]-3-oxidanylidene-propyl]carbamate
Authors:Liu, L, Li, Y.C, Zhou, Y, Yang, Q.
Deposit date:2022-11-07
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Inhibition of chitin deacetylases to attenuate plant fungal diseases.
Nat Commun, 14, 2023
8HE1
DownloadVisualize
BU of 8he1 by Molmil
The structure of chitin deacetylase Pst_13661 from Puccinia striiformis f. sp. tritici
Descriptor: BENZHYDROXAMIC ACID, Chitin deacetylase, ZINC ION
Authors:Liu, L, Li, Y.C, Zhou, Y, Yang, Q.
Deposit date:2022-11-07
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Inhibition of chitin deacetylases to attenuate plant fungal diseases.
Nat Commun, 14, 2023
8HFA
DownloadVisualize
BU of 8hfa by Molmil
The structure of chitin deacetylase VdPDA1 from Verticillium dahliae
Descriptor: NodB homology domain-containing protein, ZINC ION
Authors:Liu, L, Zhou, Y, Yang, Q.
Deposit date:2022-11-10
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Inhibition of chitin deacetylases to attenuate plant fungal diseases.
Nat Commun, 14, 2023
7WK6
DownloadVisualize
BU of 7wk6 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron spike protein with human ACE2 (focus refinement on RBD-1/ACE2)
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Han, W.Y, Wang, Y.F.
Deposit date:2022-01-08
Release date:2022-02-02
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Molecular basis of receptor binding and antibody neutralization of Omicron
Nature, 604, 2022
8HF9
DownloadVisualize
BU of 8hf9 by Molmil
The structure of chitin deacetylase Pst_13661 from Puccinia striiformis f. sp. tritici
Descriptor: Chitin deacetylase, ZINC ION
Authors:Liu, L, Li, Y.C, Zhou, Y, Yang, Q.
Deposit date:2022-11-10
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Inhibition of chitin deacetylases to attenuate plant fungal diseases.
Nat Commun, 14, 2023
7WKX
DownloadVisualize
BU of 7wkx by Molmil
IL-17A in complex with the humanized antibody HB0017
Descriptor: ACETIC ACID, Heavy chain of HB0017 Fab, Interleukin-17A, ...
Authors:Xu, J, Zhu, X, He, Y.
Deposit date:2022-01-12
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural and functional insights into a novel pre-clinical-stage antibody targeting IL-17A for treatment of autoimmune diseases.
Int.J.Biol.Macromol., 202, 2022
2IGL
DownloadVisualize
BU of 2igl by Molmil
Crystal Structure of E. coli YEDX, a transthyretin related protein
Descriptor: Transthyretin-like protein
Authors:Zuo, Y, Malhotra, A.
Deposit date:2006-09-22
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Expression, Purification and Structure Determination of Yedx, a Transthyretin-Related Protein from Escherichia coli
To be Published
7E39
DownloadVisualize
BU of 7e39 by Molmil
SARS-CoV-2 spike in complex with the Ab4 neutralizing antibody (State 3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Ab4, Light Chain of Ab4, ...
Authors:Liu, C.
Deposit date:2021-02-08
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Three epitope-distinct human antibodies from RenMab mice neutralize SARS-CoV-2 and cooperatively minimize the escape of mutants.
Cell Discov, 7, 2021
7E3B
DownloadVisualize
BU of 7e3b by Molmil
SARS-Cov-2 spike in complex with the Ab5 neutralizing antibody (focused refinement on Fab-RBD)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Ab5, Light Chain of Ab5, ...
Authors:Liu, C.
Deposit date:2021-02-08
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Three epitope-distinct human antibodies from RenMab mice neutralize SARS-CoV-2 and cooperatively minimize the escape of mutants.
Cell Discov, 7, 2021
7E3C
DownloadVisualize
BU of 7e3c by Molmil
SARS-CoV-2 spike in complex with the Ab1 neutralizing antibody (focused refinement on Fab-RBD)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Ab1, Light chain of Ab1, ...
Authors:Liu, C.
Deposit date:2021-02-08
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Three epitope-distinct human antibodies from RenMab mice neutralize SARS-CoV-2 and cooperatively minimize the escape of mutants.
Cell Discov, 7, 2021
7EG4
DownloadVisualize
BU of 7eg4 by Molmil
Cryo-EM structure of nauclefine-induced PDE3A-SLFN12 complex
Descriptor: MAGNESIUM ION, Parvine, Schlafen family member 12, ...
Authors:Liu, N, Chen, J, Wang, X.D, Wang, H.W.
Deposit date:2021-03-24
Release date:2021-09-29
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of PDE3A-SLFN12 complex and structure-based design for a potent apoptosis inducer of tumor cells.
Nat Commun, 12, 2021
7EG0
DownloadVisualize
BU of 7eg0 by Molmil
Cryo-EM structure of anagrelide-induced PDE3A-SLFN12 complex
Descriptor: 6,7-bis(chloranyl)-3,5-dihydro-1H-imidazo[2,1-b]quinazolin-2-one, MAGNESIUM ION, Schlafen family member 12, ...
Authors:Liu, N, Chen, J, Wang, X.D, Wang, H.W.
Deposit date:2021-03-23
Release date:2021-09-29
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of PDE3A-SLFN12 complex and structure-based design for a potent apoptosis inducer of tumor cells.
Nat Commun, 12, 2021
7EG1
DownloadVisualize
BU of 7eg1 by Molmil
Cryo-EM structure of DNMDP-induced PDE3A-SLFN12 complex
Descriptor: (4~{R})-3-[4-(diethylamino)-3-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]-4-methyl-4,5-dihydro-1~{H}-pyridazin-6-one, MAGNESIUM ION, Schlafen family member 12, ...
Authors:Liu, N, Chen, J, Wang, X.D, Wang, H.W.
Deposit date:2021-03-23
Release date:2021-11-03
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of PDE3A-SLFN12 complex and structure-based design for a potent apoptosis inducer of tumor cells.
Nat Commun, 12, 2021
6V03
DownloadVisualize
BU of 6v03 by Molmil
ELIC-propylammonium complex in POPC-only nanodiscs
Descriptor: 3-AMINOPROPANE, Gamma-aminobutyric-acid receptor subunit beta-1
Authors:Grosman, C, Kumar, P.
Deposit date:2019-11-18
Release date:2020-01-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of a lipid-sensitive pentameric ligand-gated ion channel embedded in a phosphatidylcholine-only bilayer.
Proc.Natl.Acad.Sci.USA, 117, 2020
6V0B
DownloadVisualize
BU of 6v0b by Molmil
Unliganded ELIC in POPC-only nanodiscs.
Descriptor: Gamma-aminobutyric-acid receptor subunit beta-1
Authors:Grosman, C, Kumar, P.
Deposit date:2019-11-18
Release date:2020-01-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structures of a lipid-sensitive pentameric ligand-gated ion channel embedded in a phosphatidylcholine-only bilayer.
Proc.Natl.Acad.Sci.USA, 117, 2020
8WBX
DownloadVisualize
BU of 8wbx by Molmil
Cryo-EM structure of the ABCG25 bound to ABA
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, ABC transporter G family member 25
Authors:Xin, J, Yan, K.G.
Deposit date:2023-09-10
Release date:2023-09-27
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural insights into AtABCG25, an angiosperm-specific abscisic acid exporter.
Plant Commun., 5, 2024
8WAM
DownloadVisualize
BU of 8wam by Molmil
Cryo-EM structure of the ABCG25 E232Q mutant bound to ATP and Magnesium
Descriptor: ABC transporter G family member 25, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Xin, J, Yan, K.G.
Deposit date:2023-09-07
Release date:2023-09-27
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural insights into AtABCG25, an angiosperm-specific abscisic acid exporter.
Plant Commun., 5, 2024
8WD6
DownloadVisualize
BU of 8wd6 by Molmil
Cryo-EM structure of the ABCG25
Descriptor: ABC transporter G family member 25
Authors:Xin, J, Yan, K.G.
Deposit date:2023-09-14
Release date:2023-09-27
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Structural insights into AtABCG25, an angiosperm-specific abscisic acid exporter.
Plant Commun., 5, 2024
8WBA
DownloadVisualize
BU of 8wba by Molmil
Cryo-EM structure of the ABCG25 bound to CHS
Descriptor: ABC transporter G family member 25, CHOLESTEROL HEMISUCCINATE
Authors:Xin, J, Yan, K.G.
Deposit date:2023-09-09
Release date:2023-09-27
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into AtABCG25, an angiosperm-specific abscisic acid exporter.
Plant Commun., 5, 2024
6VDQ
DownloadVisualize
BU of 6vdq by Molmil
Crystal structure of SfmD
Descriptor: 3-methyl-L-tyrosine peroxygenase, HEME C
Authors:Shin, I, Liu, A.
Deposit date:2019-12-27
Release date:2021-03-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A novel catalytic heme cofactor in SfmD with a single thioether bond and a bis -His ligand set revealed by a de novo crystal structural and spectroscopic study.
Chem Sci, 12, 2021
6VDP
DownloadVisualize
BU of 6vdp by Molmil
Crystal structure of SfmD truncated variant
Descriptor: 3-methyl-L-tyrosine peroxygenase, HEME C
Authors:Shin, I, Liu, A.
Deposit date:2019-12-27
Release date:2021-03-10
Last modified:2021-07-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A novel catalytic heme cofactor in SfmD with a single thioether bond and a bis -His ligand set revealed by a de novo crystal structural and spectroscopic study.
Chem Sci, 12, 2021
6VDZ
DownloadVisualize
BU of 6vdz by Molmil
Crystal structure of reduced SfmD by soaking with sodium hydrosulfite
Descriptor: 3-methyl-L-tyrosine peroxygenase, HEME C
Authors:Shin, I, Liu, A.
Deposit date:2019-12-27
Release date:2021-03-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A novel catalytic heme cofactor in SfmD with a single thioether bond and a bis -His ligand set revealed by a de novo crystal structural and spectroscopic study.
Chem Sci, 12, 2021
6VE0
DownloadVisualize
BU of 6ve0 by Molmil
Crystal structure of reduced SfmD by soaking with sodium hydrosulfite
Descriptor: 3-methyl-L-tyrosine peroxygenase, HEME C
Authors:Shin, I, Liu, A.
Deposit date:2019-12-27
Release date:2021-03-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:A novel catalytic heme cofactor in SfmD with a single thioether bond and a bis -His ligand set revealed by a de novo crystal structural and spectroscopic study.
Chem Sci, 12, 2021
5EOB
DownloadVisualize
BU of 5eob by Molmil
Crystal structure of CMET in complex with novel inhibitor
Descriptor: 6-[bis(fluoranyl)-[6-(4-fluorophenyl)-[1,2,4]triazolo[4,3-b][1,2,4]triazin-3-yl]methyl]quinoline, Hepatocyte growth factor receptor
Authors:Liu, Q, Chen, T, Xu, Y.
Deposit date:2015-11-10
Release date:2016-10-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Discovery of 6-(difluoro(6-(4-fluorophenyl)-[1,2,4]triazolo[4,3-b][1,2,4]triazin-3-yl)methyl)quinoline as a highly potent and selective c-Met inhibitor
Eur.J.Med.Chem., 116, 2016

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon