Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8E4H
DownloadVisualize
BU of 8e4h by Molmil
Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGAGGAAGTGGG)
Descriptor: DNA (5'-D(*AP*AP*TP*AP*AP*GP*AP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*TP*CP*TP*TP*AP*T)-3'), Transcription factor PU.1
Authors:Terrell, J.R, Poon, G.M.K.
Deposit date:2022-08-18
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:DNA selection by the master transcription factor PU.1.
Cell Rep, 42, 2023
8E3K
DownloadVisualize
BU of 8e3k by Molmil
Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG)
Descriptor: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), SODIUM ION, ...
Authors:Terrell, J.R, Poon, G.M.K.
Deposit date:2022-08-17
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:DNA selection by the master transcription factor PU.1.
Cell Rep, 42, 2023
8E5Y
DownloadVisualize
BU of 8e5y by Molmil
Human PU.1 ETS-Domain Bound to d(AATAAGCGGAAGTGGG) Acetate Free at pH 5.4
Descriptor: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), SODIUM ION, ...
Authors:Terrell, J.R, Poon, G.M.K.
Deposit date:2022-08-22
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:DNA selection by the master transcription factor PU.1.
Cell Rep, 42, 2023
2R2P
DownloadVisualize
BU of 2r2p by Molmil
Kinase domain of human ephrin type-A receptor 5 (EphA5)
Descriptor: CHLORIDE ION, Ephrin type-A receptor 5, SULFATE ION
Authors:Walker, J.R, Cuerrier, D, Butler-Cole, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2007-08-27
Release date:2007-09-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Kinase Domain of Human Ephrin Type-A Receptor 5 (EphA5).
To be Published
8EE9
DownloadVisualize
BU of 8ee9 by Molmil
Human PU.1 ETS-Domain (165-270) Bound to d(AATAAAAGGAATGGGG)
Descriptor: DNA (5'-D(*AP*AP*TP*AP*AP*AP*AP*GP*GP*AP*AP*TP*GP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*CP*AP*TP*TP*CP*CP*TP*TP*TP*TP*AP*T)-3'), Transcription factor PU.1
Authors:Terrell, J.R, Poon, G.M.K.
Deposit date:2022-09-06
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:DNA selection by the master transcription factor PU.1.
Cell Rep, 42, 2023
2QFE
DownloadVisualize
BU of 2qfe by Molmil
Distal C2-Like Domain of Human Calpain-7
Descriptor: BROMIDE ION, Calpain-7
Authors:Walker, J.R, Cuerrier, D, Ravulapalli, R, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S.
Deposit date:2007-06-27
Release date:2007-07-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of the C2 Domain of Human Calpain-7
To be Published
8EBH
DownloadVisualize
BU of 8ebh by Molmil
Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAATGGGG)
Descriptor: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*TP*GP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*CP*AP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), Transcription factor PU.1
Authors:Terrell, J.R, Poon, G.M.K.
Deposit date:2022-08-31
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:DNA selection by the master transcription factor PU.1.
Cell Rep, 42, 2023
2QGX
DownloadVisualize
BU of 2qgx by Molmil
Ubiquitin-conjugating enzyme E2Q
Descriptor: Ubiquitin-conjugating enzyme E2 Q1
Authors:Neculai, D, Avvakumov, G.V, Xue, S, Walker, J.R, Mackenzie, F, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Sicheri, F, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2007-06-29
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.
Mol Cell Proteomics, 11, 2012
2QQA
DownloadVisualize
BU of 2qqa by Molmil
Crystal Structure of DtxR(E9A C102D) Complexed with Nickel(II)
Descriptor: Diphtheria toxin repressor, NICKEL (II) ION, PHOSPHATE ION
Authors:D'Aquino, J.A, Lattimer, J.R, Denninger, A, D'Aquino, K.E, Ringe, D.
Deposit date:2007-07-26
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Role of the N-Terminal Helix in the Metal Ion-Induced Activation of the Diphtheria Toxin Repressor DtxR.
Biochemistry, 46, 2007
3PTM
DownloadVisualize
BU of 3ptm by Molmil
The crystal structure of rice (Oryza sativa L.) Os4BGlu12 with 2-fluoroglucopyranoside
Descriptor: 2-deoxy-2-fluoro-alpha-D-glucopyranose, Beta-glucosidase Os4BGlu12, GLYCEROL, ...
Authors:Sansenya, S, Opassiri, R, Kuaprasert, B, Chen, C.J, Ketudat Cairns, J.R.
Deposit date:2010-12-03
Release date:2011-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of rice (Oryza sativa L.) Os4BGlu12, an oligosaccharide and tuberonic acid glucoside-hydrolyzing beta-glucosidase with significant thioglucohydrolase activity
Arch.Biochem.Biophys., 510, 2011
3PTR
DownloadVisualize
BU of 3ptr by Molmil
PHF2 Jumonji domain
Descriptor: 1,2-ETHANEDIOL, PHD finger protein 2
Authors:Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
Deposit date:2010-12-03
Release date:2011-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
3PUA
DownloadVisualize
BU of 3pua by Molmil
PHF2 Jumonji-NOG-Ni(II)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, N-OXALYLGLYCINE, ...
Authors:Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
Deposit date:2010-12-03
Release date:2011-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
2Q20
DownloadVisualize
BU of 2q20 by Molmil
Structure of the germline Vk1 O18/O8 light chain variable domain homodimer
Descriptor: Vk1 O18/O8 germline light chain variable domain
Authors:Thompson, J.R, Ramirez-Alvarado, M, Baden, E.M.
Deposit date:2007-05-25
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Altered dimer interface decreases stability in an amyloidogenic protein.
J.Biol.Chem., 283, 2008
3POM
DownloadVisualize
BU of 3pom by Molmil
Crystal Structure of the Unliganded Retinoblastoma Protein Pocket Domain
Descriptor: Retinoblastoma-associated protein
Authors:Balog, E.R.M, Burke, J.R, Rubin, S.M.
Deposit date:2010-11-23
Release date:2011-04-27
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the unliganded retinoblastoma protein pocket domain.
Proteins, 79, 2011
2Q2G
DownloadVisualize
BU of 2q2g by Molmil
Crystal structure of dimerization domain of HSP40 from Cryptosporidium parvum, cgd2_1800
Descriptor: Heat shock 40 kDa protein, putative (fragment), SULFATE ION
Authors:Wernimont, A.K, Lew, J, Lin, L, Hassanali, A, Kozieradzki, I, Wasney, G, Vedadi, M, Walker, J.R, Zhao, Y, Schapira, M, Bochkarev, A, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Hui, R, Brokx, S, Structural Genomics Consortium (SGC)
Deposit date:2007-05-28
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of dimerization domain of HSP40 from Cryptosporidium parvum, cgd2_1800.
To be Published
3PD7
DownloadVisualize
BU of 3pd7 by Molmil
Crystal Structure of the Sixth BRCT Domain of Human TopBP1
Descriptor: DNA topoisomerase 2-binding protein 1
Authors:Lee, J, Xu, C, Cui, G, Thompson, J.R, Mer, G.
Deposit date:2010-10-22
Release date:2010-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal Structure of the Sixth BRCT Domain of Human TopBP1
To be Published
8DVW
DownloadVisualize
BU of 8dvw by Molmil
Structure of the Campylobacter concisus glycosyltransferase PglA R203Q
Descriptor: N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
Authors:Vuksanovic, N, Clasman, J.R, Bernstein, H.M, Imperiali, B, Allen, K.N.
Deposit date:2022-07-30
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisus PglA.
Protein Sci., 33, 2024
8DVZ
DownloadVisualize
BU of 8dvz by Molmil
Structure of the Campylobacter concisus glycosyltransferase PglA R282V variant
Descriptor: N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
Authors:Vuksanovic, N, Clasman, J.R, Bernstein, H.M, Imperiali, B, Allen, K.N.
Deposit date:2022-07-30
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisus PglA.
Protein Sci., 33, 2024
8DQD
DownloadVisualize
BU of 8dqd by Molmil
Structure of the Campylobacter concisus glycosyltransferase PglA
Descriptor: N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
Authors:Vuksanovic, N, Clasman, J.R, Bernstein, H.M, Imperiali, B, Allen, K.N.
Deposit date:2022-07-18
Release date:2024-01-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisus PglA.
Protein Sci., 33, 2024
2R8E
DownloadVisualize
BU of 2r8e by Molmil
Crystal structure of YrbI from Escherichia coli in complex with Mg
Descriptor: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, CHLORIDE ION, MAGNESIUM ION
Authors:Tsodikov, O.V, Aggarwal, P, Rubin, J.R, Stuckey, J.A, Woodard, R, Biswas, T.
Deposit date:2007-09-10
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
8EW3
DownloadVisualize
BU of 8ew3 by Molmil
Cryo EM structure of Vibrio cholerae NQR
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Na(+)-translocating NADH-quinone reductase subunit A, ...
Authors:Fuller, J.R, Juarez, O.
Deposit date:2022-10-21
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (2.65159 Å)
Cite:Novel cofactor binding motifs, electron transfer and ion pumping mechanisms of the respiratory complex NQR
To Be Published
3Q2P
DownloadVisualize
BU of 3q2p by Molmil
Reduced sweetness of a monellin (MNEI) mutant results from increased protein flexibility and disruption of a distant poly-(L-proline) II helix
Descriptor: Monellin chain B/Monellin chain A chimeric protein, SODIUM ION
Authors:Templeton, C.M, Hobbs, J.R, Munger, S.D, Conn, G.L.
Deposit date:2010-12-20
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.341 Å)
Cite:Reduced Sweetness of a Monellin (MNEI) Mutant Results from Increased Protein Flexibility and Disruption of a Distant Poly-(L-Proline) II Helix.
Chem Senses, 36, 2011
2RLF
DownloadVisualize
BU of 2rlf by Molmil
Proton Channel M2 from Influenza A in complex with inhibitor rimantadine
Descriptor: Matrix protein 2, RIMANTADINE
Authors:Chou, J.J, Schnell, J.R.
Deposit date:2007-07-11
Release date:2008-01-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and mechanism of the M2 proton channel of influenza A virus.
Nature, 451, 2008
8EVU
DownloadVisualize
BU of 8evu by Molmil
Cryo EM structure of Vibrio cholerae NQR
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Na(+)-translocating NADH-quinone reductase subunit A, ...
Authors:Fuller, J.R, Juarez, O.
Deposit date:2022-10-20
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (2.5804 Å)
Cite:Novel cofactor binding motifs, electron transfer and ion pumping mechanisms of the respiratory complex NQR
To Be Published
3PHE
DownloadVisualize
BU of 3phe by Molmil
HCV NS5B with a bound quinolone inhibitor
Descriptor: 4-chlorobenzyl 6-fluoro-7-(4-methylpiperazin-1-yl)-1-[4-(methylsulfonyl)benzyl]-4-oxo-1,4-dihydroquinoline-3-carboxylate, HCV encoded nonstructural 5B protein
Authors:Somoza, J.R, To, N, Lehoux, I.
Deposit date:2010-11-03
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Quinolones as HCV NS5B polymerase inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011

221716

数据于2024-06-26公开中

PDB statisticsPDBj update infoContact PDBjnumon