Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4WQF
DownloadVisualize
BU of 4wqf by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Lin, J, Gagnon, M.G, Steitz, T.A.
Deposit date:2014-10-21
Release date:2015-01-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation.
Cell, 160, 2015
4WPO
DownloadVisualize
BU of 4wpo by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Lin, J, Gagnon, M.G, Steitz, T.A.
Deposit date:2014-10-20
Release date:2015-01-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation.
Cell, 160, 2015
4WQU
DownloadVisualize
BU of 4wqu by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Lin, J, Gagnon, M.G, Steitz, T.A.
Deposit date:2014-10-22
Release date:2015-01-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation.
Cell, 160, 2015
4WQY
DownloadVisualize
BU of 4wqy by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Lin, J, Gagnon, M.G, Steitz, T.A.
Deposit date:2014-10-22
Release date:2015-01-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation.
Cell, 160, 2015
3HL2
DownloadVisualize
BU of 3hl2 by Molmil
The crystal structure of the human SepSecS-tRNASec complex
Descriptor: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, Monothiophosphate, O-phosphoseryl-tRNA(Sec) selenium transferase, ...
Authors:Palioura, S, Steitz, T.A, Soll, D, Simonovic, M.
Deposit date:2009-05-26
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The human SepSecS-tRNASec complex reveals the mechanism of selenocysteine formation.
Science, 325, 2009
3I55
DownloadVisualize
BU of 3i55 by Molmil
Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Steitz, T.A, Moore, P.B.
Deposit date:2009-07-03
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structures of triacetyloleandomycin and mycalamide A bind to the large ribosomal subunit of Haloarcula marismortui.
Antimicrob.Agents Chemother., 53, 2009
3I56
DownloadVisualize
BU of 3i56 by Molmil
Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Steitz, T.A, Moore, P.B.
Deposit date:2009-07-03
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of triacetyloleandomycin and mycalamide A bind to the large ribosomal subunit of Haloarcula marismortui.
Antimicrob.Agents Chemother., 53, 2009
3J4J
DownloadVisualize
BU of 3j4j by Molmil
Model of full-length T. thermophilus Translation Initiation Factor 2 refined against its cryo-EM density from a 30S Initiation Complex map
Descriptor: Translation initiation factor IF-2
Authors:Simonetti, A, Marzi, S, Billas, I.M.L, Tsai, A, Fabbretti, A, Myasnikov, A, Roblin, P, Vaiana, A.C, Hazemann, I, Eiler, D, Steitz, T.A, Puglisi, J.D, Gualerzi, C.O, Klaholz, B.P.
Deposit date:2013-08-26
Release date:2013-09-25
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (11.5 Å)
Cite:Involvement of protein IF2 N domain in ribosomal subunit joining revealed from architecture and function of the full-length initiation factor.
Proc.Natl.Acad.Sci.USA, 110, 2013
397D
DownloadVisualize
BU of 397d by Molmil
A 1.3 A RESOLUTION CRYSTAL STRUCTURE OF THE HIV-1 TRANS-ACTIVATION RESPONSE REGION RNA STEM REVEALS A METAL ION-DEPENDENT BULGE CONFORMATION
Descriptor: CALCIUM ION, RNA (5'-R(*GP*CP*UP*CP*UP*CP*UP*GP*GP*CP*CP*C)-3'), RNA (5'-R(*GP*GP*CP*CP*AP*GP*AP*UP*CP*UP*GP*AP*GP*CP*G)-3')
Authors:Ippolito, J.A, Steitz, T.A.
Deposit date:1998-04-30
Release date:1998-09-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A 1.3-A resolution crystal structure of the HIV-1 trans-activation response region RNA stem reveals a metal ion-dependent bulge conformation.
Proc.Natl.Acad.Sci.USA, 95, 1998
4M4W
DownloadVisualize
BU of 4m4w by Molmil
Mechanistic implications for the bacterial primosome assembly of the structure of a helicase-helicase loader complex
Descriptor: DNA primase, Primosomal protein DnaI, Replicative helicase
Authors:Liu, B, Eliason, W.K, Steitz, T.A.
Deposit date:2013-08-07
Release date:2013-09-25
Last modified:2013-10-02
Method:X-RAY DIFFRACTION (6.1 Å)
Cite:Structure of a helicase-helicase loader complex reveals insights into the mechanism of bacterial primosome assembly.
Nat Commun, 4, 2013
4PCW
DownloadVisualize
BU of 4pcw by Molmil
Crystal Structure of the N-terminal Domain of Human Profilaggrin at 2.2 A Resolution
Descriptor: CALCIUM ION, Filaggrin, NONAETHYLENE GLYCOL
Authors:Bunick, C.G, Steitz, T.A.
Deposit date:2014-04-16
Release date:2015-04-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Human Profilaggrin S100 Domain and Identification of Target Proteins Annexin II, Stratifin, and HSP27.
J. Invest. Dermatol., 135, 2015
2KFZ
DownloadVisualize
BU of 2kfz by Molmil
KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND ZINC ONLY
Descriptor: 5'-D(*GP*CP*TP*TP*AP*(US1)P*G)-3', KLENOW FRAGMENT OF DNA POLYMERASE I, MAGNESIUM ION, ...
Authors:Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A.
Deposit date:1998-07-02
Release date:1998-11-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli.
Biochemistry, 38, 1999
2KFN
DownloadVisualize
BU of 2kfn by Molmil
KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND MANGANESE
Descriptor: 5'-D(*GP*CP*TP*TP*AP*(US1)P*G)-3', KLENOW FRAGMENT OF DNA POLYMERASE I, MAGNESIUM ION, ...
Authors:Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A.
Deposit date:1998-07-01
Release date:1998-11-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli.
Biochemistry, 38, 1999
4Q6G
DownloadVisualize
BU of 4q6g by Molmil
Crystal Structure of the C-terminal domain of AcKRS-1 bound with N-acetyl-lysine and ADPNP
Descriptor: 1,2-ETHANEDIOL, N(6)-ACETYLLYSINE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Eiler, D.R, Kavran, J, Steitz, T.A.
Deposit date:2014-04-22
Release date:2014-11-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Polyspecific pyrrolysyl-tRNA synthetases from directed evolution.
Proc.Natl.Acad.Sci.USA, 111, 2014
2KZZ
DownloadVisualize
BU of 2kzz by Molmil
KLENOW FRAGMENT WITH NORMAL SUBSTRATE AND ZINC ONLY
Descriptor: DNA (5'-D(*GP*CP*TP*T*AP*CP*G)-3'), PROTEIN (DNA POLYMERASE I), ZINC ION
Authors:Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A.
Deposit date:1998-07-07
Release date:1999-12-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli.
Biochemistry, 38, 1999
4QJH
DownloadVisualize
BU of 4qjh by Molmil
Crystal Structure of the Twister Ribozyme with the Nucleotide 5'- to the Cleavage Site Ordered at 4.1 A Resolution
Descriptor: MAGNESIUM ION, Twister Ribozyme
Authors:Eiler, D.R, Wang, J, Steitz, T.A.
Deposit date:2014-06-03
Release date:2014-09-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.88 Å)
Cite:Structural basis for the fast self-cleavage reaction catalyzed by the twister ribozyme.
Proc.Natl.Acad.Sci.USA, 111, 2014
4QJD
DownloadVisualize
BU of 4qjd by Molmil
Crystal Structure of Twister with the Nucleotide 5'- to the Cleavage Site Disordered at 3.1 A Resolution
Descriptor: MAGNESIUM ION, Twister RNA sequence
Authors:Eiler, D.R, Wang, J, Steitz, T.A.
Deposit date:2014-06-03
Release date:2014-09-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for the fast self-cleavage reaction catalyzed by the twister ribozyme.
Proc.Natl.Acad.Sci.USA, 111, 2014
2KZM
DownloadVisualize
BU of 2kzm by Molmil
KLENOW FRAGMENT WITH NORMAL SUBSTRATE AND ZINC AND MANGANESE
Descriptor: DNA (5'-D(*GP*CP*TP*TP*A*CP*GP*C)-3'), MANGANESE (II) ION, PROTEIN (DNA POLYMERASE I), ...
Authors:Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A.
Deposit date:1998-07-03
Release date:1999-02-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli.
Biochemistry, 38, 1999
1FG0
DownloadVisualize
BU of 1fg0 by Molmil
LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND
Descriptor: 23S RIBOSOMAL RNA, 5'-R(CCGGCGGGCUGGUUCAAACCGGCCCGCCGGACC)-3'-5'-R(P-PUROMYCIN)-3'
Authors:Nissen, P, Hansen, J, Ban, N, Moore, P.B, Steitz, T.A.
Deposit date:2000-07-26
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structural basis of ribosome activity in peptide bond synthesis.
Science, 289, 2000
1FFZ
DownloadVisualize
BU of 1ffz by Molmil
LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH R(CC)-DA-PUROMYCIN
Descriptor: 23S RIBOSOMAL RNA, R(P*CP*C*)-D(P*A)-R(P*(PU))
Authors:Nissen, P, Hansen, J, Ban, N, Moore, P.B, Steitz, T.A.
Deposit date:2000-07-26
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structural basis of ribosome activity in peptide bond synthesis.
Science, 289, 2000
1GSG
DownloadVisualize
BU of 1gsg by Molmil
Structure of E.coli glutaminyl-tRNA synthetase complexed with trnagln and ATP at 2.8 Angstroms resolution
Descriptor: GLUTAMINYL-TRNA SYNTHETASE, TRNAGLN
Authors:Rould, M.A, Perona, J.J, Soell, D, Steitz, T.A.
Deposit date:1990-04-03
Release date:1992-02-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution.
Science, 246, 1989
4S20
DownloadVisualize
BU of 4s20 by Molmil
Structural basis for transcription reactivation by RapA
Descriptor: 5'-D(P*AP*CP*GP*AP*CP*TP*GP*AP*GP*CP*CP*GP*AP*TP*G)-3', 5'-R(P*AP*UP*CP*GP*GP*CP*UP*CP*A)-3', DNA-directed RNA polymerase subunit alpha, ...
Authors:Liu, B, Zuo, Y, Steitz, T.A.
Deposit date:2015-01-16
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (4.7 Å)
Cite:Structural basis for transcription reactivation by RapA.
Proc.Natl.Acad.Sci.USA, 112, 2015
4V5H
DownloadVisualize
BU of 4v5h by Molmil
E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.
Descriptor: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Seidelt, B, Innis, C.A, Wilson, D.N, Gartmann, M, Armache, J, Villa, E, Trabuco, L.G, Becker, T, Mielke, T, Schulten, K, Steitz, T.A, Beckmann, R.
Deposit date:2009-10-26
Release date:2014-07-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Structural insight into nascent polypeptide chain-mediated translational stalling.
Science, 326, 2009
4V7W
DownloadVisualize
BU of 4v7w by Molmil
Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.
Descriptor: 16S rRNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Bulkley, D.P, Innis, C.A, Blaha, G, Steitz, T.A.
Deposit date:2010-08-16
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Revisiting the structures of several antibiotics bound to the bacterial ribosome.
Proc.Natl.Acad.Sci.USA, 107, 2010
4W2I
DownloadVisualize
BU of 4w2i by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ...
Authors:Polikanov, Y.S, Szal, T, Jiang, F, Gupta, P, Matsuda, R, Shiozuka, M, Steitz, T.A, Vazquez-Laslop, N, Mankin, A.S.
Deposit date:2014-09-12
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Negamycin Interferes with Decoding and Translocation by Simultaneous Interaction with rRNA and tRNA.
Mol.Cell, 56, 2014

220472

数据于2024-05-29公开中

PDB statisticsPDBj update infoContact PDBjnumon