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Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 5-triphosphate (ATP)
Descriptor:	ADENOSINE-5'-TRIPHOSPHATE, BROMIDE ION, Chains: A, ...
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2019-11-12
Release date:	2020-09-23
Last modified:	2024-05-15
Method:	X-RAY DIFFRACTION (2.55 Å)
Cite:	Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch. Rna, 26, 2020

5FKE

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GU
Descriptor:	BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-15
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

5FK2

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GG
Descriptor:	BARIUM ION, S-ADENOSYLMETHIONINE, SAM-I RIBOSWITCH
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-14
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

6TFH

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH); soaking with Manganese(II) (Mn2+)
Descriptor:	Chains: A, MANGANESE (II) ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2019-11-14
Release date:	2020-09-23
Last modified:	2024-01-24
Method:	X-RAY DIFFRACTION (2.95 Å)
Cite:	Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch. Rna, 26, 2020

5FKG

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CG
Descriptor:	BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-15
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.95 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

5FK4

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UU
Descriptor:	BARIUM ION, S-ADENOSYLMETHIONINE, SAM-I RIBOSWITCH
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-14
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.43 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

5FK3

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CC
Descriptor:	BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-14
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

6TFG

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 3-phosphate 5-phosphosulfate (APPS)
Descriptor:	3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, Chains: A, MAGNESIUM ION, ...
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2019-11-14
Release date:	2020-09-23
Last modified:	2024-01-24
Method:	X-RAY DIFFRACTION (2.45 Å)
Cite:	Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch. Rna, 26, 2020

5FJ1

Structure of the standard kink turn HmKt-7 as stem loop in P212121 space group
Descriptor:	HMKT-7, MAGNESIUM ION, SODIUM ION
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-05
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.75 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

5FK5

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is AA
Descriptor:	BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-14
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (3.315 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

5FJ0

Structure of the standard kink turn HmKt-7 as simple duplex in P4222 space group
Descriptor:	HMKT-7, MAGNESIUM ION
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-05
Release date:	2016-09-28
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

5FKD

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UA
Descriptor:	BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-15
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

5FJC

SAM-I riboswitch bearing the H. marismortui Kt-7 variant C-2bU
Descriptor:	BARIUM ION, MAGNESIUM ION, POTASSIUM ION, ...
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-07
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (1.71 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

5FK6

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CA
Descriptor:	BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-14
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

5FJ4

Structure of the standard kink turn HmKt-7 as stem loop bound with U1A and L7Ae proteins
Descriptor:	50S RIBOSOMAL PROTEIN L7AE, HMKT-7, U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2015-10-06
Release date:	2016-05-25
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.95 Å)
Cite:	A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016

5G4T

The structure of a quasi-cyclic six k-turn duplex RNA species
Descriptor:	HMKT-7
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2016-05-17
Release date:	2016-09-28
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.751 Å)
Cite:	A Quasi-Cyclic RNA Nano-Scale Molecular Object Constructed Using Kink Turns. Nanoscale, 8, 2016

5G4U

Association of three two-k-turn units based on Kt-7 3bU,3nU, forming a triangular-shaped structure
Descriptor:	50S RIBOSOMAL PROTEIN L7AE, HMKT-7
Authors:	Huang, L, Lilley, D.M.J.
Deposit date:	2016-05-17
Release date:	2016-09-28
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (2.65 Å)
Cite:	A Quasi-Cyclic RNA Nano-Scale Molecular Object Constructed Using Kink Turns. Nanoscale, 8, 2016

3L72

Chicken cytochrome BC1 complex with kresoxim-I-dimethyl bound
Descriptor:	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, CYTOCHROME B, ...
Authors:	Huang, L, Zhang, Z, Berry, E.A.
Deposit date:	2009-12-27
Release date:	2010-02-02
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (3.06 Å)
Cite:	Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors. To be Published

3L70

Cytochrome BC1 complex from chicken with trifloxystrobin bound
Descriptor:	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ...
Authors:	Huang, L, Berry, E.A.
Deposit date:	2009-12-27
Release date:	2010-02-02
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.75 Å)
Cite:	Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "distal" Qo inhibitors. To be Published

3L75

Cytochrome BC1 complex from chicken with fenamidone bound
Descriptor:	(5S)-5-methyl-2-(methylsulfanyl)-5-phenyl-3-(phenylamino)-3,5-dihydro-4H-imidazol-4-one, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, ...
Authors:	Huang, L, Berry, E.A.
Deposit date:	2009-12-28
Release date:	2010-02-02
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.79 Å)
Cite:	FAMOXADONE AND RELATED INHIBITORS BIND LIKE METHOXY ACRYLATE INHIBITORS IN THE Qo SITE OF THE BC1 COMPL AND FIX THE RIESKE IRON-SULFUR PROTEIN IN A POSITIO CLOSE TO BUT DISTINCT FROM THAT SEEN WITH STIGMATELLIN AND OTHER "DISTAL" Qo INHIBITORS. To be Published

3L71

Cytochrome BC1 complex from chicken with azoxystrobin bound
Descriptor:	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ...
Authors:	Huang, L, Berry, E.A.
Deposit date:	2009-12-27
Release date:	2010-02-02
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.84 Å)
Cite:	Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors. To be Published

3L74

Cytochrome BC1 complex from chicken with famoxadone bound
Descriptor:	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, CARDIOLIPIN, ...
Authors:	Huang, L, Berry, E.A.
Deposit date:	2009-12-28
Release date:	2010-02-02
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.76 Å)
Cite:	Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors. To be Published

3L73

Cytochrome BC1 complex from chicken with triazolone inhibitor
Descriptor:	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 4-[7-(3,3-dimethylbut-1-yn-1-yl)naphthalen-1-yl]-5-methoxy-2-methyl-2,4-dihydro-3H-1,2,4-triazol-3-one, CARDIOLIPIN, ...
Authors:	Huang, L, Berry, E.A.
Deposit date:	2009-12-27
Release date:	2010-02-02
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (3.04 Å)
Cite:	Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors. To be Published

3SUX

Crystal structure of THF riboswitch, bound with THF
Descriptor:	5-HYDROXYMETHYLENE-6-HYDROFOLIC ACID, Riboswitch, SODIUM ION
Authors:	Huang, L, Serganov, A, Patel, D.J.
Deposit date:	2011-07-11
Release date:	2011-09-14
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (2.9 Å)
Cite:	Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch. Proc.Natl.Acad.Sci.USA, 108, 2011

3SUY

Crystal structure of THF riboswitch, unbound status
Descriptor:	riboswitch
Authors:	Huang, L, Serganov, A, Patel, D.J.
Deposit date:	2011-07-11
Release date:	2011-09-14
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (3.21 Å)
Cite:	Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch. Proc.Natl.Acad.Sci.USA, 108, 2011

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