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2HEB
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BU of 2heb by Molmil
CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Funahashi, J, Yamagata, Y, Fujii, S, Yutani, K.
Deposit date:1997-09-16
Release date:1998-01-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
2HEA
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BU of 2hea by Molmil
CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Funahashi, J, Yamagata, Y, Fujii, S, Yutani, K.
Deposit date:1997-09-16
Release date:1998-01-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
2HEF
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BU of 2hef by Molmil
CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Funahashi, J, Yamagata, Y, Fujii, S, Yutani, K.
Deposit date:1997-09-16
Release date:1998-01-14
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
2D5V
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BU of 2d5v by Molmil
Crystal structure of HNF-6alpha DNA-binding domain in complex with the TTR promoter
Descriptor: 5'-D(*AP*TP*TP*AP*TP*TP*GP*AP*CP*TP*TP*AP*GP*A)-3', 5'-D(*TP*CP*TP*AP*AP*GP*TP*CP*AP*AP*TP*AP*AP*T)-3', ACETATE ION, ...
Authors:Iyaguchi, D, Yao, M, Watanabe, N, Nishihira, J, Tanaka, I.
Deposit date:2005-11-07
Release date:2006-12-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:DNA recognition mechanism of the ONECUT homeodomain of transcription factor HNF-6
Structure, 15, 2007
3GJW
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BU of 3gjw by Molmil
PARP complexed with A968427
Descriptor: 7-(pyrrolidin-1-ylmethyl)pyrrolo[1,2-a]quinoxalin-4(5H)-one, Poly [ADP-ribose] polymerase 1
Authors:Park, C.H.
Deposit date:2009-03-09
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Synthesis and SAR of novel tricyclic quinoxalinone inhibitors of poly(ADP-ribose)polymerase-1 (PARP-1)
Bioorg.Med.Chem.Lett., 19, 2009
9JI2
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BU of 9ji2 by Molmil
Cryo-EM structure of Mycobacterium tuberculosis transcription activation complex with unphosphated PhoP
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Lin, W, Feng, Y.
Deposit date:2024-09-11
Release date:2025-03-05
Last modified:2025-03-12
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural insights into transcription regulation of the global OmpR/PhoB family regulator PhoP from Mycobacterium tuberculosis.
Nat Commun, 16, 2025
9KET
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BU of 9ket by Molmil
Cryo-EM structure of Mycobacterium tuberculosis transcription activation complex with two PhoP molecules(composite map)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Lin, W, Feng, Y.
Deposit date:2024-11-05
Release date:2025-03-05
Last modified:2025-03-12
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structural insights into transcription regulation of the global OmpR/PhoB family regulator PhoP from Mycobacterium tuberculosis.
Nat Commun, 16, 2025
9KEV
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BU of 9kev by Molmil
Cryo-EM structure of Mycobacterium tuberculosis transcription activation complex with six PhoP molecules (composite map)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Lin, W, Feng, Y.
Deposit date:2024-11-05
Release date:2025-03-05
Last modified:2025-03-12
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Structural insights into transcription regulation of the global OmpR/PhoB family regulator PhoP from Mycobacterium tuberculosis.
Nat Commun, 16, 2025
9KEU
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BU of 9keu by Molmil
Cryo-EM structure of Mycobacterium tuberculosis transcription activation complex with four PhoP molecules (composite map)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Lin, W, Feng, Y.
Deposit date:2024-11-05
Release date:2025-03-05
Last modified:2025-03-12
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into transcription regulation of the global OmpR/PhoB family regulator PhoP from Mycobacterium tuberculosis.
Nat Commun, 16, 2025
3QDD
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BU of 3qdd by Molmil
HSP90A N-terminal domain in complex with BIIB021
Descriptor: 6-chloro-9-[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]-9H-purin-2-amine, Heat shock protein HSP 90-alpha
Authors:Arndt, J.W, Biamonte, M.A.
Deposit date:2011-01-18
Release date:2012-07-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:EC144 Is a Potent Inhibitor of the Heat Shock Protein 90.
J.Med.Chem., 55, 2012
8HML
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BU of 8hml by Molmil
Co-crystal structure of the C terminal DNA binding domain of Saccharopolyspora erythraea GlnR in complex with its conserved promoter DNA in 2.95 Angstrom resolution
Descriptor: DNA (5'-D(*AP*CP*GP*TP*AP*AP*CP*AP*TP*CP*GP*CP*GP*GP*TP*AP*AP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*TP*TP*AP*CP*CP*GP*CP*GP*AP*TP*GP*TP*TP*AP*CP*GP*T)-3'), DNA-binding response OmpR family regulator
Authors:Lin, W, Xu, J.C.
Deposit date:2022-12-04
Release date:2023-06-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural insights into the transcription activation mechanism of the global regulator GlnR from actinobacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
2QCY
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BU of 2qcy by Molmil
Crystal Structure of a monomeric form of Severe Acute Respiratory Syndrome (SARS) 3C-like protease mutant
Descriptor: 3C-like proteinase
Authors:Shi, J.H, Sivaraman, J, Song, J.X.
Deposit date:2007-06-20
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mechanism for controlling the dimer-monomer switch and coupling dimerization to catalysis of the severe acute respiratory syndrome coronavirus 3C-like protease.
J.Virol., 82, 2008
5GVU
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BU of 5gvu by Molmil
crystal structure of BVDV NS3 helicase domain
Descriptor: NS3 helicase
Authors:Li, S, Mao, X.
Deposit date:2016-09-06
Release date:2017-09-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:crystal structure of BVDV NS3 helicase
To Be Published
7VWY
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BU of 7vwy by Molmil
Cryo-EM structure of Rob-dependent transcription activation complex in a unique conformation
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Lin, W, Feng, Y.
Deposit date:2021-11-12
Release date:2022-06-08
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (4.57 Å)
Cite:Structural basis of transcription activation by Rob, a pleiotropic AraC/XylS family regulator.
Nucleic Acids Res., 50, 2022
7W5Y
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BU of 7w5y by Molmil
Cryo-EM structure of SoxS-dependent transcription activation complex with fpr promoter DNA
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Lin, W, Feng, Y.
Deposit date:2021-11-30
Release date:2022-10-26
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural basis of three different transcription activation strategies adopted by a single regulator SoxS.
Nucleic Acids Res., 50, 2022
7W5W
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BU of 7w5w by Molmil
Cryo-EM structure of SoxS-dependent transcription activation complex with micF promoter DNA
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Lin, W, Feng, Y.
Deposit date:2021-11-30
Release date:2022-10-26
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (4.55 Å)
Cite:Structural basis of three different transcription activation strategies adopted by a single regulator SoxS.
Nucleic Acids Res., 50, 2022
8K1Y
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BU of 8k1y by Molmil
Crystal structure of human serum albumin and ruthenium Val complex adduct
Descriptor: Albumin, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Gong, W.J, Xie, L.L, Wang, W.M, Wang, H.F.
Deposit date:2023-07-11
Release date:2024-07-17
Last modified:2024-12-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Insight into the anti-proliferation activity and photoinduced NO release of four nitrosylruthenium isomeric complexes and their HSA complex adducts.
Metallomics, 16, 2024
2MJV
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BU of 2mjv by Molmil
Solution structures of second bromodomain of Brd4 with di-acetylated Twist peptide
Descriptor: Bromodomain-containing protein 4, Twist-related protein 1
Authors:Zeng, L, Zhou, M.
Deposit date:2014-01-16
Release date:2014-03-19
Last modified:2024-11-27
Method:SOLUTION NMR
Cite:Disrupting the Interaction of BRD4 with Diacetylated Twist Suppresses Tumorigenesis in Basal-like Breast Cancer.
Cancer Cell, 25, 2014
7RK0
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BU of 7rk0 by Molmil
Crystal structure of Thermovibrio ammonificans THI4
Descriptor: 2-[(E)-[(4R)-5-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-4-oxidanyl-3-oxidanylidene-pentan-2-ylidene]amino]ethanoic acid, FE (III) ION, Thiamine thiazole synthase
Authors:Li, Q, Bruner, S.D.
Deposit date:2021-07-21
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure and function of aerotolerant, multiple-turnover THI4 thiazole synthases.
Biochem.J., 478, 2021
6LY9
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BU of 6ly9 by Molmil
The membrane-embedded Vo domain of V/A-ATPase from Thermus thermophilus
Descriptor: V-type ATP synthase subunit C, V-type ATP synthase subunit E, V-type ATP synthase subunit I, ...
Authors:Kishikawa, J, Nakanishi, A, Furuta, A, Kato, T, Namba, K, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
Deposit date:2020-02-13
Release date:2020-09-09
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Mechanical inhibition of isolated V o from V/A-ATPase for proton conductance.
Elife, 9, 2020
6LY8
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BU of 6ly8 by Molmil
V/A-ATPase from Thermus thermophilus, the soluble domain, including V1, d, two EG stalks, and N-terminal domain of a-subunit.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
Authors:Kishikawa, J, Nakanishi, A, Furuta, A, Kato, T, Namba, K, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
Deposit date:2020-02-13
Release date:2020-09-09
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanical inhibition of isolated V o from V/A-ATPase for proton conductance.
Elife, 9, 2020
4XB2
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BU of 4xb2 by Molmil
Hyperthermophilic archaeal homoserine dehydrogenase mutant in complex with NADPH
Descriptor: 319aa long hypothetical homoserine dehydrogenase, L-HOMOSERINE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Sakuraba, H, Inoue, S, Yoneda, K, Ohshima, T.
Deposit date:2014-12-16
Release date:2015-07-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal Structures of a Hyperthermophilic Archaeal Homoserine Dehydrogenase Suggest a Novel Cofactor Binding Mode for Oxidoreductases.
Sci Rep, 5, 2015
4XB1
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BU of 4xb1 by Molmil
Hyperthermophilic archaeal homoserine dehydrogenase in complex with NADPH
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 319aa long hypothetical homoserine dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Sakuraba, H, Inoue, S, Yoneda, K, Ohshima, T.
Deposit date:2014-12-16
Release date:2015-07-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of a Hyperthermophilic Archaeal Homoserine Dehydrogenase Suggest a Novel Cofactor Binding Mode for Oxidoreductases.
Sci Rep, 5, 2015
7XK4
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BU of 7xk4 by Molmil
Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, state 2
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Kishikawa, J, Ishikawa, M, Masuya, T, Murai, M, Barquera, B, Miyoshi, H.
Deposit date:2022-04-19
Release date:2022-07-20
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of Na + -pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae.
Nat Commun, 13, 2022
7XK5
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BU of 7xk5 by Molmil
Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, state 3
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Kishikawa, J, Ishikawa, M, Masuya, T, Murai, M, Barquera, B, Miyoshi, H.
Deposit date:2022-04-19
Release date:2022-07-20
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of Na + -pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae.
Nat Commun, 13, 2022

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数据于2025-07-09公开中

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