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3E26
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BU of 3e26 by Molmil
Crystal structure of M. tuberculosis glucosyl-3-phosphoglycerate synthase
Descriptor: Putative uncharacterized protein
Authors:Pereira, P.J.B, Empadinhas, N, Costa, M.S, Macedo-Ribeiro, S.
Deposit date:2008-08-05
Release date:2008-12-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mycobacterium tuberculosis glucosyl-3-phosphoglycerate synthase: structure of a key enzyme in methylglucose lipopolysaccharide biosynthesis
Plos One, 3, 2008
3E25
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BU of 3e25 by Molmil
Crystal structure of M. tuberculosis glucosyl-3-phosphoglycerate synthase
Descriptor: 3-PHOSPHOGLYCERIC ACID, MAGNESIUM ION, Putative uncharacterized protein, ...
Authors:Pereira, P.J.B, Empadinhas, N, Costa, M.S, Macedo-Ribeiro, S.
Deposit date:2008-08-05
Release date:2008-12-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mycobacterium tuberculosis glucosyl-3-phosphoglycerate synthase: structure of a key enzyme in methylglucose lipopolysaccharide biosynthesis
Plos One, 3, 2008
1HE2
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BU of 1he2 by Molmil
Human biliverdin IX beta reductase: NADP/biliverdin IX alpha ternary complex
Descriptor: BILIVERDIN IX BETA REDUCTASE, BILIVERDINE IX ALPHA, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Pereira, P.J.B, Macedo-Ribeiro, S, Parraga, A, Perez-Luque, R, Cunningham, O, Darcy, K, Mantle, T.J, Coll, M.
Deposit date:2000-11-18
Release date:2001-02-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of Human Biliverdin Ix Beta Reductase, an Early Fetal Bilirubin Ix Producing Enzyme
Nat.Struct.Biol., 8, 2001
1HDO
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BU of 1hdo by Molmil
Human biliverdin IX beta reductase: NADP complex
Descriptor: BILIVERDIN IX BETA REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Pereira, P.J.B, Macedo-Ribeiro, S, Parraga, A, Perez-Luque, R, Cunningham, O, Darcy, K, Mantle, T.J, Coll, M.
Deposit date:2000-11-16
Release date:2001-02-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structure of Human Biliverdin Ix Beta Reductase, an Early Fetal Bilirubin Ix Producing Enzyme
Nat.Struct.Biol., 8, 2001
1HE5
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BU of 1he5 by Molmil
Human biliverdin IX beta reductase: NADP/Lumichrome ternary complex
Descriptor: BILIVERDIN IX BETA REDUCTASE, LUMICHROME, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Pereira, P.J.B, Macedo-Ribeiro, S, Parraga, A, Perez-Luque, R, Cunningham, O, Darcy, K, Mantle, T.J, Coll, M.
Deposit date:2000-11-19
Release date:2001-02-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of Human Biliverdin Ix Beta Reductase, an Early Fetal Bilirubin Ix Producing Enzyme
Nat.Struct.Biol., 8, 2001
1HE4
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BU of 1he4 by Molmil
Human biliverdin IX beta reductase: NADP/FMN ternary complex
Descriptor: BILIVERDIN IX BETA REDUCTASE, FLAVIN MONONUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Pereira, P.J.B, Macedo-Ribeiro, S, Parraga, A, Perez-Luque, R, Cunningham, O, Darcy, K, Mantle, T.J, Coll, M.
Deposit date:2000-11-19
Release date:2001-02-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Human Biliverdin Ix Beta Reductase, an Early Fetal Bilirubin Ix Producing Enzyme
Nat.Struct.Biol., 8, 2001
1HE3
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BU of 1he3 by Molmil
Human biliverdin IX beta reductase: NADP/mesobiliverdin IV alpha ternary complex
Descriptor: BILIVERDIN IX BETA REDUCTASE, MESOBILIVERDIN IV ALPHA, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Pereira, P.J.B, Macedo-Ribeiro, S, Parraga, A, Perez-Luque, R, Cunningham, O, Darcy, K, Mantle, T.J, Coll, M.
Deposit date:2000-11-18
Release date:2001-02-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Human Biliverdin Ix Beta Reductase, an Early Fetal Bilirubin Ix Producing Enzyme
Nat.Struct.Biol., 8, 2001
4BAG
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BU of 4bag by Molmil
Feruloyl Esterase Domain of XYNY from Clostridium thermocellum after exposure to 266nm UV laser
Descriptor: CADMIUM ION, ENDO-1,4-BETA-XYLANASE Y, GLYCEROL
Authors:Pereira, P.J.B, de Sanctis, D.
Deposit date:2012-09-14
Release date:2013-04-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:In-House Uv Radiation-Damage-Induced Phasing of Selenomethionine-Labeled Protein Structures.
J.Struct.Biol., 181, 2013
7PHX
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BU of 7phx by Molmil
Tsetse thrombin inhibitor in complex with human alpha-thrombin - acid-stable sulfotyrosine analogue
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Thrombin heavy chain, ...
Authors:Pereira, P.J.B, Ripoll-Rozada, J, Calisto, B.M.
Deposit date:2021-08-18
Release date:2021-10-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis and evaluation of peptidic thrombin inhibitors bearing acid-stable sulfotyrosine analogues.
Chem.Commun.(Camb.), 57, 2021
6G7D
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BU of 6g7d by Molmil
Structure of MeT1 from Mycobacterium hassiacum in complex with SAM and glycerol.
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Pereira, P.J.B, Ripoll-Rozada, J.
Deposit date:2018-04-05
Release date:2019-01-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Biosynthesis of mycobacterial methylmannose polysaccharides requires a unique 1-O-methyltransferase specific for 3-O-methylated mannosides.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6G80
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BU of 6g80 by Molmil
Structure of Mycobacterium hassiacum MeT1 from orthorhombic crystals.
Descriptor: GLYCEROL, Methyltransferase domain protein, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Pereira, P.J.B, Ripoll-Rozada, J.
Deposit date:2018-04-06
Release date:2019-01-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Biosynthesis of mycobacterial methylmannose polysaccharides requires a unique 1-O-methyltransferase specific for 3-O-methylated mannosides.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6H40
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BU of 6h40 by Molmil
High resolution structure of MeT1 from Mycobacterium hassiacum in complex with 3-methoxy-1,2-propanediol.
Descriptor: (2~{S})-3-methoxypropane-1,2-diol, CHLORIDE ION, GLYCEROL, ...
Authors:Pereira, P.J.B, Ripoll-Rozada, J.
Deposit date:2018-07-20
Release date:2019-01-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.053 Å)
Cite:Biosynthesis of mycobacterial methylmannose polysaccharides requires a unique 1-O-methyltransferase specific for 3-O-methylated mannosides.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6RT1
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BU of 6rt1 by Molmil
Native tetragonal lysozyme - home source data
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Pereira, P.J.B.
Deposit date:2019-05-22
Release date:2019-05-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.336 Å)
Cite:Protein crystals as a key for deciphering macromolecular crowding effects on biological reactions.
Phys Chem Chem Phys, 22, 2020
6RT9
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BU of 6rt9 by Molmil
Orthorhombic lysozyme grown with 300g/L sucrose
Descriptor: CHLORIDE ION, Lysozyme C, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Pereira, P.J.B, Ferreira, C, Martins, P.M.
Deposit date:2019-05-22
Release date:2019-06-05
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Protein crystals as a key for deciphering macromolecular crowding effects on biological reactions.
Phys Chem Chem Phys, 22, 2020
6RTA
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BU of 6rta by Molmil
Tetragonal lysozyme grown with 300g/L Ficoll
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Pereira, P.J.B, Ferreira, C, Martins, P.M.
Deposit date:2019-05-22
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Protein crystals as a key for deciphering macromolecular crowding effects on biological reactions.
Phys Chem Chem Phys, 22, 2020
6RT3
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BU of 6rt3 by Molmil
Native tetragonal lysozyme - synchrotron data
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Pereira, P.J.B.
Deposit date:2019-05-22
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Protein crystals as a key for deciphering macromolecular crowding effects on biological reactions.
Phys Chem Chem Phys, 22, 2020
5NFG
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BU of 5nfg by Molmil
Structure of recombinant cardosin B from Cynara cardunculus
Descriptor: Procardosin-B,Procardosin-B, alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Pereira, P.J.B, Figueiredo, A.C, Manso, J.A, Almeida, C.M, Simoes, I.
Deposit date:2017-03-14
Release date:2017-10-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.375 Å)
Cite:Functional and structural characterization of synthetic cardosin B-derived rennet.
Appl. Microbiol. Biotechnol., 101, 2017
7ZPF
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BU of 7zpf by Molmil
Three-dimensional structure of AIP56, a short-trip single chain AB toxin from Photobacterium damselae subsp. piscicida.
Descriptor: Aip56, GLYCEROL, NICKEL (II) ION, ...
Authors:Lisboa, J, Pereira, P.J.B, dos Santos, N.M.S.
Deposit date:2022-04-27
Release date:2023-05-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Unconventional structure and mechanisms for membrane interaction and translocation of the NF-kappa B-targeting toxin AIP56.
Nat Commun, 14, 2023
3O3P
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BU of 3o3p by Molmil
Crystal structure of R. xylanophilus MpgS in complex with GDP-Mannose
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, ...
Authors:Macedo-Ribeiro, S, Pereira, P.J.B, Empadinhas, N, da Costa, M.S.
Deposit date:2010-07-25
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.529 Å)
Cite:Functional and structural characterization of a novel mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus reveals its dual substrate specificity
Mol.Microbiol., 79, 2011
6FGM
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BU of 6fgm by Molmil
The NMR solution structure of the peptide AC12 from Hypsiboas raniceps
Descriptor: ALA-CYS-PHE-LEU-THR-ARG-LEU-GLY-THR-TYR-VAL-CYS
Authors:Popov, C.S.F.C, Simas, B.S, Goodfellow, B.J, Bocca, A.L, Andrade, P.B, Pereira, D, Valentao, P, Pereira, P.J.B, Rodrigues, J.E, Veloso Jr, P.H.H, Rezende, T.M.B.
Deposit date:2018-01-11
Release date:2019-01-09
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Host-defense peptides AC12, DK16 and RC11 with immunomodulatory activity isolated from Hypsiboas raniceps skin secretion.
Peptides, 113, 2019
6Q5T
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BU of 6q5t by Molmil
Crystal structure of Mycolicibacterium hassiacum glucosylglycerate hydrolase (MhGgH) - apo form
Descriptor: hydrolase
Authors:Cereija, T.B, Macedo-Ribeiro, S, Pereira, P.J.B.
Deposit date:2018-12-09
Release date:2019-05-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:The structural characterization of a glucosylglycerate hydrolase provides insights into the molecular mechanism of mycobacterial recovery from nitrogen starvation.
Iucrj, 6, 2019
1TZ8
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BU of 1tz8 by Molmil
The monoclinic crystal structure of transthyretin in complex with diethylstilbestrol
Descriptor: ACETATE ION, CARBONATE ION, DIETHYLSTILBESTROL, ...
Authors:Morais-de-Sa, E.M, Pereira, P.J.B, Saraiva, M.J, Damas, A.M.
Deposit date:2004-07-09
Release date:2004-10-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The crystal structure of transthyretin in complex with diethylstilbestrol: a promising template for the design of amyloid inhibitors
J.Biol.Chem., 279, 2004
1TT6
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BU of 1tt6 by Molmil
The orthorhombic crystal structure of transthyretin in complex with diethylstilbestrol
Descriptor: DIETHYLSTILBESTROL, GLYCEROL, SULFATE ION, ...
Authors:Morais-de-Sa, E.M, Pereira, P.J.B, Saraiva, M.J, Damas, A.M.
Deposit date:2004-06-22
Release date:2004-10-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of transthyretin in complex with diethylstilbestrol: a promising template for the design of amyloid inhibitors
J.Biol.Chem., 279, 2004
5OOH
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BU of 5ooh by Molmil
Human biliverdin IX beta reductase: NADP/Erythrosin extra bluish ternary complex
Descriptor: Erythrosin, Flavin reductase (NADPH), GLYCEROL, ...
Authors:Manso, J.A, Pereira, P.J.B.
Deposit date:2017-08-07
Release date:2018-03-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:In silicoand crystallographic studies identify key structural features of biliverdin IX beta reductase inhibitors having nanomolar potency.
J. Biol. Chem., 293, 2018
3F1Y
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BU of 3f1y by Molmil
Mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus
Descriptor: CHLORIDE ION, MAGNESIUM ION, Mannosyl-3-phosphoglycerate synthase
Authors:Macedo-Ribeiro, S, Pereira, P.J.B, Empadinhas, N, da Costa, M.S.
Deposit date:2008-10-28
Release date:2009-11-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Functional and structural characterization of a novel mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus reveals its dual substrate specificity
Mol.Microbiol., 79, 2011

 

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