1WD6
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![BU of 1wd6 by Molmil](/molmil-images/mine/1wd6) | |
1WFX
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![BU of 1wfx by Molmil](/molmil-images/mine/1wfx) | Crystal Structure of APE0204 from Aeropyrum pernix | Descriptor: | CHLORIDE ION, Probable RNA 2'-phosphotransferase, ZINC ION | Authors: | Kato-Murayama, M, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-27 | Release date: | 2004-11-27 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal Structure of the RNA 2'-Phosphotransferase from Aeropyrum pernix K1 J.Mol.Biol., 348, 2005
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1UF3
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![BU of 1uf3 by Molmil](/molmil-images/mine/1uf3) | Crystal structure of TT1561 of thermus thermophilus HB8 | Descriptor: | CALCIUM ION, hypothetical protein TT1561 | Authors: | Kato-Murayama, M, Shirouzu, M, Terada, T, Murayama, K, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2003-05-23 | Release date: | 2003-11-23 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structure of TT1561 of thermus thermophilus HB8 To be Published
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2CWK
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![BU of 2cwk by Molmil](/molmil-images/mine/2cwk) | |
2CV8
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![BU of 2cv8 by Molmil](/molmil-images/mine/2cv8) | |
2DXF
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![BU of 2dxf by Molmil](/molmil-images/mine/2dxf) | Crystal structure of nucleoside diphosphate kinase in complex with GTP analog | Descriptor: | CHLORIDE ION, Nucleoside diphosphate kinase, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | Authors: | Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2006-08-25 | Release date: | 2007-02-25 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structure of nucleoside diphosphate kinase in complex with GTP analog To be Published
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2DY9
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![BU of 2dy9 by Molmil](/molmil-images/mine/2dy9) | Crystal structure of nucleoside diphosphate kinase in complex with ADP | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ... | Authors: | Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2006-09-08 | Release date: | 2007-03-08 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.01 Å) | Cite: | Crystal structure of nucleoside diphosphate kinase in complex with ADP To be Published
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2DXA
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![BU of 2dxa by Molmil](/molmil-images/mine/2dxa) | Crystal structure of trans editing enzyme ProX from E.coli | Descriptor: | CHLORIDE ION, Protein ybaK | Authors: | Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2006-08-25 | Release date: | 2007-02-25 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.58 Å) | Cite: | Crystal structure of trans editing enzyme ProX from E.coli To be Published
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2DYC
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![BU of 2dyc by Molmil](/molmil-images/mine/2dyc) | Crystal structure of the N-terminal domain of mouse galectin-4 | Descriptor: | Galectin-4 | Authors: | Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2006-09-08 | Release date: | 2007-10-16 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of the N-terminal domain of mouse galectin-4 To be Published
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2DXD
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![BU of 2dxd by Molmil](/molmil-images/mine/2dxd) | Crystal structure of nucleoside diphosphate kinase in complex with ATP analog | Descriptor: | ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Nucleoside diphosphate kinase | Authors: | Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2006-08-25 | Release date: | 2007-02-25 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.77 Å) | Cite: | Crystal structure of nucleoside diphosphate kinase in complex with ATP analog To be Published
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2DYA
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![BU of 2dya by Molmil](/molmil-images/mine/2dya) | Crystal structure of complex between Adenine nucleotide and nucleoside diphosphate kinase | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ... | Authors: | Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2006-09-08 | Release date: | 2007-03-08 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.77 Å) | Cite: | Crystal structure of complex between Adenine nucleotide and nucleoside diphosphate kinase To be Published
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2DXE
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![BU of 2dxe by Molmil](/molmil-images/mine/2dxe) | Crystal structure of nucleoside diphosphate kinase in complex with GDP | Descriptor: | CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2006-08-25 | Release date: | 2007-02-25 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structure of nucleoside diphosphate kinase in complex with GDP To be Published
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8I5L
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![BU of 8i5l by Molmil](/molmil-images/mine/8i5l) | |
2CXA
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![BU of 2cxa by Molmil](/molmil-images/mine/2cxa) | Crystal structure of Leucyl/phenylalanyl-tRNA protein transferase from Escherichia coli | Descriptor: | Leucyl/phenylalanyl-tRNA-protein transferase | Authors: | Kato-Murayama, M, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-06-28 | Release date: | 2005-12-28 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | The crystal structure of leucyl/phenylalanyl-tRNA-protein transferase from Escherichia coli Protein Sci., 16, 2007
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1WEK
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![BU of 1wek by Molmil](/molmil-images/mine/1wek) | Crystal structure of the conserved hypothetical protein TT1465 from Thermus thermophilus HB8 | Descriptor: | PHOSPHATE ION, hypothetical protein TT1465 | Authors: | Kukimoto-Niino, M, Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-25 | Release date: | 2004-11-25 | Last modified: | 2014-11-12 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structures of possible lysine decarboxylases from Thermus thermophilus HB8 Protein Sci., 13, 2004
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1WDV
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![BU of 1wdv by Molmil](/molmil-images/mine/1wdv) | Crystal structure of hypothetical protein APE2540 | Descriptor: | hypothetical protein APE2540 | Authors: | Murayama, K, Kato-Murayama, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-18 | Release date: | 2004-11-18 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structure of a putative trans-editing enzyme for prolyl-tRNA synthetase from Aeropyrum pernix K1 at 1.7 A resolution. Acta Crystallogr.,Sect.F, 61, 2005
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7YMP
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![BU of 7ymp by Molmil](/molmil-images/mine/7ymp) | Crystal structure of lysoplasmalogen specific phospholipase D | Descriptor: | Lysoplasmalogenase | Authors: | Murayama, K, Kato-Murayama, M, Sugimori, D, Shirouzu, M, Hamana, H. | Deposit date: | 2022-07-29 | Release date: | 2023-02-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.57 Å) | Cite: | Structural basis for the substrate specificity switching of lysoplasmalogen-specific phospholipase D from Thermocrispum sp. RD004668. Biosci.Biotechnol.Biochem., 87, 2022
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7YMQ
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![BU of 7ymq by Molmil](/molmil-images/mine/7ymq) | Crystal structure of lysoplasmalogen specific phopholipase D, F211L mutant | Descriptor: | Lysoplasmalogenase | Authors: | Murayama, K, Kato-Murayama, M, Sugimori, D, Shirouzu, M, Hamana, H. | Deposit date: | 2022-07-29 | Release date: | 2023-02-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.29 Å) | Cite: | Structural basis for the substrate specificity switching of lysoplasmalogen-specific phospholipase D from Thermocrispum sp. RD004668. Biosci.Biotechnol.Biochem., 87, 2022
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7YMR
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![BU of 7ymr by Molmil](/molmil-images/mine/7ymr) | Complex structure of lysoplasmalogen specific phopholipase D, F211L mutant with LPC | Descriptor: | Lysoplasmalogenase, [(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{5}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate | Authors: | Murayama, K, Kato-Murayama, M, Sugimori, D, Shirouzu, M, Hamana, H. | Deposit date: | 2022-07-29 | Release date: | 2023-02-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.69 Å) | Cite: | Structural basis for the substrate specificity switching of lysoplasmalogen-specific phospholipase D from Thermocrispum sp. RD004668. Biosci.Biotechnol.Biochem., 87, 2022
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4YN3
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![BU of 4yn3 by Molmil](/molmil-images/mine/4yn3) | Crystal structure of Cucumisin complex with pro-peptide | Descriptor: | CHLORIDE ION, Cucumisin, DI(HYDROXYETHYL)ETHER, ... | Authors: | Murayama, K, Kato-Murayama, M, Yokoyama, S, Arima, K, Shirouzu, M. | Deposit date: | 2015-03-09 | Release date: | 2016-03-09 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Structural basis of cucumisin protease activity regulation by its propeptide J. Biochem., 161, 2017
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5Y7Z
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![BU of 5y7z by Molmil](/molmil-images/mine/5y7z) | Complex structure of cyclin G-associated kinase with gefitinib | Descriptor: | Cyclin-G-associated kinase, Gefitinib, NANOBODY, ... | Authors: | Ohbayashi, N, Murayama, K, Kato-Murayama, M, Shirouzu, M. | Deposit date: | 2017-08-18 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.804 Å) | Cite: | Structural Basis for the Inhibition of Cyclin G-Associated Kinase by Gefitinib. ChemistryOpen, 7, 2018
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5Y80
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![BU of 5y80 by Molmil](/molmil-images/mine/5y80) | Complex structure of cyclin G-associated kinase with gefitinib | Descriptor: | Cyclin-G-associated kinase, Gefitinib, NANOBODY | Authors: | Ohbayashi, N, Murayama, K, Kato-Murayama, M, Shirouzu, M. | Deposit date: | 2017-08-18 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structural Basis for the Inhibition of Cyclin G-Associated Kinase by Gefitinib. ChemistryOpen, 7, 2018
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3QHE
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![BU of 3qhe by Molmil](/molmil-images/mine/3qhe) | Crystal structure of the complex between the armadillo repeat domain of adenomatous polyposis coli and the tyrosine-rich domain of Sam68 | Descriptor: | Adenomatous polyposis coli protein, KH domain-containing, RNA-binding, ... | Authors: | Morishita, E.C.J, Murayama, K, Kato-Murayama, M, Ishizuku-Katsura, Y, Tomabechi, Y, Terada, T, Handa, N, Shirouzu, M, Akiyama, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2011-01-25 | Release date: | 2011-11-02 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structures of the armadillo repeat domain of adenomatous polyposis coli and its complex with the tyrosine-rich domain of sam68 Structure, 19, 2011
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5C2J
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![BU of 5c2j by Molmil](/molmil-images/mine/5c2j) | Complex structure of the GAP domain of MgcRacGAP and Cdc42 | Descriptor: | ALUMINUM FLUORIDE, Cell division control protein 42 homolog, GUANOSINE-5'-DIPHOSPHATE, ... | Authors: | Murayama, K, Kato-Murayama, M, Hosaka, T, Kitamura, T, Yokoyama, S, Shirouzu, M. | Deposit date: | 2015-06-16 | Release date: | 2016-06-22 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structural basis of G-protein target alternation of MgcRacGAP by phospholylation To Be Published
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5C2K
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![BU of 5c2k by Molmil](/molmil-images/mine/5c2k) | Crystal structure of the fusion protein linked by RhoA and the GAP domain of MgcRacGAP | Descriptor: | ALUMINUM FLUORIDE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Murayama, K, Kato-Murayama, M, Hosaka, T, Kitamura, T, Yokoyama, S, Shirouzu, M. | Deposit date: | 2015-06-16 | Release date: | 2016-06-22 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.42 Å) | Cite: | Structural basis of G-protein target alternation of MgcRacGAP by phospholylation To Be Published
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