Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4V5B
DownloadVisualize
BU of 4v5b by Molmil
Structure of PDF binding helix in complex with the ribosome.
Descriptor: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Bingel-Erlenmeyer, R, Kohler, R, Kramer, G, Sandikci, A, Antolic, S, Maier, T, Schaffitzel, C, Wiedmann, B, Bukau, B, Ban, N.
Deposit date:2007-11-22
Release date:2014-07-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.74 Å)
Cite:A Peptide Deformylase-Ribosome Complex Reveals Mechanism of Nascent Chain Processing.
Nature, 452, 2008
2VRH
DownloadVisualize
BU of 2vrh by Molmil
Structure of the E. coli trigger factor bound to a translating ribosome
Descriptor: 50S RIBOSOMAL PROTEIN L23, 50S RIBOSOMAL PROTEIN L24, 50S RIBOSOMAL PROTEIN L29, ...
Authors:Merz, F, Boehringer, D, Schaffitzel, C, Preissler, S, Hoffmann, A, Maier, T, Rutkowska, A, Lozza, J, Ban, N, Bukau, B, Deuerling, E.
Deposit date:2008-04-07
Release date:2008-06-17
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (19 Å)
Cite:Molecular Mechanism and Structure of Trigger Factor Bound to the Translating Ribosome.
Embo J., 27, 2008
1LZW
DownloadVisualize
BU of 1lzw by Molmil
Structural basis of ClpS-mediated switch in ClpA substrate recognition
Descriptor: ATP-dependent clp protease ATP-binding subunit ClpA, PLATINUM (II) ION, Protein yljA
Authors:Zeth, K, Ravelli, R.B, Paal, K, Cusack, S, Bukau, B, Dougan, D.A.
Deposit date:2002-06-11
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of the adaptor protein ClpS in complex with the N-terminal domain of ClpA
Nat.Struct.Biol., 9, 2002
1W2B
DownloadVisualize
BU of 1w2b by Molmil
Trigger Factor ribosome binding domain in complex with 50S
Descriptor: 23S RRNA, 50S RIBOSOMAL PROTEIN L10E, 50S RIBOSOMAL PROTEIN L13P, ...
Authors:Ferbitz, L, Maier, T, Patzelt, H, Bukau, B, Deuerling, E, Ban, N.
Deposit date:2004-07-01
Release date:2004-09-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Trigger Factor in Complex with the Ribosome Forms a Molecular Cradle for Nascent Proteins
Nature, 431, 2004
1W26
DownloadVisualize
BU of 1w26 by Molmil
Trigger Factor in Complex with the Ribosome forms a Molecular Cradle for Nascent Proteins
Descriptor: TRIGGER FACTOR
Authors:Ferbitz, L, Maier, T, Patzelt, H, Bukau, B, Deuerling, E, Ban, N.
Deposit date:2004-06-28
Release date:2004-09-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Trigger Factor in Complex with the Ribosome Forms a Molecular Cradle for Nascent Proteins
Nature, 431, 2004
6EM9
DownloadVisualize
BU of 6em9 by Molmil
S.aureus ClpC resting state, asymmetric map
Descriptor: ATP-dependent Clp protease ATP-binding subunit ClpC
Authors:Carroni, M, Mogk, A, Bukau, B, Franke, K.
Deposit date:2017-10-01
Release date:2017-12-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (8.4 Å)
Cite:Regulatory coiled-coil domains promote head-to-head assemblies of AAA+ chaperones essential for tunable activity control.
Elife, 6, 2017
6EMW
DownloadVisualize
BU of 6emw by Molmil
Structure of S.aureus ClpC in complex with MecA
Descriptor: ATP-dependent Clp protease ATP-binding subunit, ATP-dependent Clp protease ATP-binding subunit ClpC, Adapter protein MecA, ...
Authors:Carroni, M, Mogk, A, Bukau, B, Franke, K.
Deposit date:2017-10-03
Release date:2017-12-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Regulatory coiled-coil domains promote head-to-head assemblies of AAA+ chaperones essential for tunable activity control.
Elife, 6, 2017
5OFO
DownloadVisualize
BU of 5ofo by Molmil
Cryo EM structure of the E. coli disaggregase ClpB (BAP form, DWB mutant), in the ATPgammaS state, bound to the model substrate casein
Descriptor: Chaperone protein ClpB,ATP-dependent Clp protease ATP-binding subunit ClpA,Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Deville, C, Carroni, M, Franke, K.B, Topf, M, Bukau, B, Mogk, A, Saibil, H.R.
Deposit date:2017-07-11
Release date:2017-08-16
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural pathway of regulated substrate transfer and threading through an Hsp100 disaggregase.
Sci Adv, 3, 2017
5OG1
DownloadVisualize
BU of 5og1 by Molmil
Cryo EM structure of the E. coli disaggregase ClpB (BAP form, DWB mutant), in the ATPgammaS state
Descriptor: Chaperone protein ClpB,ATP-dependent Clp protease ATP-binding subunit ClpA,Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Deville, C, Carroni, M, Franke, K.B, Topf, M, Bukau, B, Mogk, A, Saibil, H.R.
Deposit date:2017-07-11
Release date:2017-08-16
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural pathway of regulated substrate transfer and threading through an Hsp100 disaggregase.
Sci Adv, 3, 2017
1MG9
DownloadVisualize
BU of 1mg9 by Molmil
The structural basis of ClpS-mediated switch in ClpA substrate recognition
Descriptor: ATP dependent clp protease ATP-binding subunit clpA, SPERMINE (FULLY PROTONATED FORM), protein yljA
Authors:Zeth, K, Ravelli, R.B, Paal, K, Cusack, S, Bukau, B, Dougan, D.A.
Deposit date:2002-08-15
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of the adaptor protein ClpS in complex with the N-terminal domain of ClpA
Nat.Struct.Biol., 9, 2002
4CIU
DownloadVisualize
BU of 4ciu by Molmil
Crystal structure of E. coli ClpB
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHAPERONE PROTEIN CLPB
Authors:Kopp, J, Sinning, I, Bukau, B, Kummer, E, Mogk, A.
Deposit date:2013-12-16
Release date:2014-05-14
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Head-to-Tail Interactions of the Coiled-Coil Domains Regulate Clpb Cooperation with Hsp70 in Protein Disaggregation
Elife, 3, 2014
4D2U
DownloadVisualize
BU of 4d2u by Molmil
Negative-stain electron microscopy of E. coli ClpB (BAP form bound to ClpP)
Descriptor: CHAPERONE PROTEIN CLPB
Authors:Carroni, M, Kummer, E, Oguchi, Y, Clare, D.K, Wendler, P, Sinning, I, Kopp, J, Mogk, A, Bukau, B, Saibil, H.R.
Deposit date:2014-05-13
Release date:2014-06-04
Last modified:2017-08-23
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Head-to-Tail Interactions of the Coiled-Coil Domains Regulate Clpb Activity and Cooperation with Hsp70 in Protein Disaggregation.
Elife, 3, 2014
4D2Q
DownloadVisualize
BU of 4d2q by Molmil
Negative-stain electron microscopy of E. coli ClpB mutant E432A (BAP form bound to ClpP)
Descriptor: CLPB
Authors:Carroni, M, Kummer, E, Oguchi, Y, Clare, D.K, Wendler, P, Sinning, I, Kopp, J, Mogk, A, Bukau, B, Saibil, H.R.
Deposit date:2014-05-12
Release date:2014-06-04
Last modified:2017-08-23
Method:ELECTRON MICROSCOPY (18 Å)
Cite:Head-to-Tail Interactions of the Coiled-Coil Domains Regulate Clpb Activity and Cooperation with Hsp70 in Protein Disaggregation.
Elife, 3, 2014
4D2X
DownloadVisualize
BU of 4d2x by Molmil
Negative-stain electron microscopy of E. coli ClpB of Y503D hyperactive mutant (BAP form bound to ClpP)
Descriptor: CHAPERONE PROTEIN CLPB
Authors:Carroni, M, Kummer, E, Oguchi, Y, Clare, D.K, Wendler, P, Sinning, I, Kopp, J, Mogk, A, Bukau, B, Saibil, H.R.
Deposit date:2014-05-13
Release date:2014-06-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (20 Å)
Cite:Head-to-Tail Interactions of the Coiled-Coil Domains Regulate Clpb Activity and Cooperation with Hsp70 in Protein Disaggregation.
Elife, 3, 2014
6Z5N
DownloadVisualize
BU of 6z5n by Molmil
DnaJB1 JD-GF
Descriptor: DnaJ homolog subfamily B member 1
Authors:Avraham-Abayev, M, London, N, Rosenzweig, R.
Deposit date:2020-05-27
Release date:2020-11-18
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:HSP40 proteins use class-specific regulation to drive HSP70 functional diversity.
Nature, 587, 2020
6GOX
DownloadVisualize
BU of 6gox by Molmil
SecA
Descriptor: Protein translocase subunit SecA
Authors:White, S.A, Huber, D.
Deposit date:2018-06-04
Release date:2019-06-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The C-terminal tail of the bacterial translocation ATPase SecA modulates its activity.
Elife, 8, 2019
2BZT
DownloadVisualize
BU of 2bzt by Molmil
NMR structure of the bacterial protein YFHJ from E. coli
Descriptor: PROTEIN ISCX
Authors:Pastore, C, Kelly, G, Adinolfi, S, Mc Cormick, J.E, Pastore, A.
Deposit date:2005-08-22
Release date:2006-12-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:YfhJ, a molecular adaptor in iron-sulfur cluster formation or a frataxin-like protein?
Structure, 14, 2006
4IO8
DownloadVisualize
BU of 4io8 by Molmil
Crystal structure of human HSP70 complexed with 4-{(2R,3S,4R)-5-[(R)-6-Amino-8-(3,4-dichloro-benzylamino)-purin-9-yl]-3,4-dihydroxy-tetrahydro-furan-2-ylmethoxymethyl}-benzonitrile
Descriptor: 4-[[(2R,3S,4R,5R)-5-[6-amino-8-[(3,4-dichlorophenyl)methylamino]purin-9-yl]-3,4-dihydroxy-oxolan-2-yl]methoxymethyl]benzonitrile, Heat shock 70kDa protein 1A variant
Authors:Musil, D, Scholz, S.
Deposit date:2013-01-07
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Functional analysis of hsp70 inhibitors.
Plos One, 8, 2013
6EM8
DownloadVisualize
BU of 6em8 by Molmil
S.aureus ClpC resting state, C2 symmetrised
Descriptor: ATP-dependent Clp protease ATP-binding subunit ClpC
Authors:Carroni, M, Mogk, A.
Deposit date:2017-10-01
Release date:2017-12-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (8.4 Å)
Cite:Regulatory coiled-coil domains promote head-to-head assemblies of AAA+ chaperones essential for tunable activity control.
Elife, 6, 2017
6QS8
DownloadVisualize
BU of 6qs8 by Molmil
ClpB (DWB and K476C mutant) bound to casein in presence of ATPgammaS - state KC-2B
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, MAGNESIUM ION, ...
Authors:Deville, C, Saibil, H.R.
Deposit date:2019-02-20
Release date:2019-07-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Two-Step Activation Mechanism of the ClpB Disaggregase for Sequential Substrate Threading by the Main ATPase Motor.
Cell Rep, 27, 2019
6QS4
DownloadVisualize
BU of 6qs4 by Molmil
Two-Step Activation Mechanism of the ClpB Disaggregase for Sequential Substrate Threading by the Main ATPase Motor.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Deville, C, Saibil, H.R.
Deposit date:2019-02-20
Release date:2019-07-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Two-Step Activation Mechanism of the ClpB Disaggregase for Sequential Substrate Threading by the Main ATPase Motor.
Cell Rep, 27, 2019
6QS7
DownloadVisualize
BU of 6qs7 by Molmil
ClpB (DWB and K476C mutant) bound to casein in presence of ATPgammaS - state KC-2A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, MAGNESIUM ION, ...
Authors:Deville, C, Saibil, H.R.
Deposit date:2019-02-20
Release date:2019-07-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Two-Step Activation Mechanism of the ClpB Disaggregase for Sequential Substrate Threading by the Main ATPase Motor.
Cell Rep, 27, 2019
7QV3
DownloadVisualize
BU of 7qv3 by Molmil
Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Filbeck, S, Pfeffer, S.
Deposit date:2022-01-19
Release date:2022-03-09
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (5.14 Å)
Cite:Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue.
Nature, 603, 2022
7QV1
DownloadVisualize
BU of 7qv1 by Molmil
Bacillus subtilis collided disome (Leading 70S)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Filbeck, S, Pfeffer, S.
Deposit date:2022-01-19
Release date:2022-03-09
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue.
Nature, 603, 2022
7QV2
DownloadVisualize
BU of 7qv2 by Molmil
Bacillus subtilis collided disome (Collided 70S)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Filbeck, S, Pfeffer, S.
Deposit date:2022-01-19
Release date:2022-03-09
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue.
Nature, 603, 2022

 

12>

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon