8HU1
| E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state | Descriptor: | 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... | Authors: | Akiyama, N, Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. | Deposit date: | 2022-12-22 | Release date: | 2024-04-03 | Last modified: | 2024-06-05 | Method: | ELECTRON MICROSCOPY (2.69 Å) | Cite: | Structural insights into the decoding capability of isoleucine tRNAs with lysidine and agmatidine. Nat.Struct.Mol.Biol., 31, 2024
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8HTZ
| E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state | Descriptor: | 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... | Authors: | Akiyama, N, Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. | Deposit date: | 2022-12-22 | Release date: | 2024-04-03 | Last modified: | 2024-06-05 | Method: | ELECTRON MICROSCOPY (2.4 Å) | Cite: | Structural insights into the decoding capability of isoleucine tRNAs with lysidine and agmatidine. Nat.Struct.Mol.Biol., 31, 2024
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8HSP
| E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state | Descriptor: | 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... | Authors: | Akiyama, N, Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. | Deposit date: | 2022-12-20 | Release date: | 2024-04-03 | Last modified: | 2024-06-05 | Method: | ELECTRON MICROSCOPY (2.32 Å) | Cite: | Structural insights into the decoding capability of isoleucine tRNAs with lysidine and agmatidine. Nat.Struct.Mol.Biol., 31, 2024
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2ZZV
| Crystal Structure of a Periplasmic Substrate Binding Protein in Complex with Calcium and Lactate | Descriptor: | ABC transporter, solute-binding protein, CALCIUM ION, ... | Authors: | Akiyama, N, Takeda, K, Miki, K. | Deposit date: | 2009-02-27 | Release date: | 2009-08-11 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Crystal structure of a periplasmic substrate-binding protein in complex with calcium lactate J.Mol.Biol., 392, 2009
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2ZZX
| Crystal Structure of a Periplasmic Substrate Binding Protein in Complex with Lactate | Descriptor: | ABC transporter, solute-binding protein, CALCIUM ION, ... | Authors: | Akiyama, N, Takeda, K, Miki, K. | Deposit date: | 2009-02-27 | Release date: | 2009-08-11 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Crystal structure of a periplasmic substrate-binding protein in complex with calcium lactate J.Mol.Biol., 392, 2009
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2ZZW
| Crystal Structure of a Periplasmic Substrate Binding Protein in Complex with Zinc and Lactate | Descriptor: | ABC transporter, solute-binding protein, LACTIC ACID, ... | Authors: | Akiyama, N, Takeda, K, Miki, K. | Deposit date: | 2009-02-27 | Release date: | 2009-08-11 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Crystal structure of a periplasmic substrate-binding protein in complex with calcium lactate J.Mol.Biol., 392, 2009
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8YUR
| E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA | Descriptor: | 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... | Authors: | Akiyama, N, Ishiguro, K, Shirouzu, M, Suzuki, T. | Deposit date: | 2024-03-27 | Release date: | 2024-11-06 | Method: | ELECTRON MICROSCOPY (2.47 Å) | Cite: | A tRNA modification with aminovaleramide facilitates AUA decoding in protein synthesis. Nat.Chem.Biol., 2024
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8YUS
| E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA | Descriptor: | 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... | Authors: | Akiyama, N, Ishiguro, K, Shirouzu, M, Suzuki, T. | Deposit date: | 2024-03-27 | Release date: | 2024-11-06 | Method: | ELECTRON MICROSCOPY (2.43 Å) | Cite: | A tRNA modification with aminovaleramide facilitates AUA decoding in protein synthesis. Nat.Chem.Biol., 2024
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8YUO
| E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site | Descriptor: | 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... | Authors: | Akiyama, N, Ishiguro, K, Shirouzu, M, Suzuki, T. | Deposit date: | 2024-03-27 | Release date: | 2024-11-06 | Method: | ELECTRON MICROSCOPY (2.25 Å) | Cite: | A tRNA modification with aminovaleramide facilitates AUA decoding in protein synthesis. Nat.Chem.Biol., 2024
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8YUQ
| E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA | Descriptor: | 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... | Authors: | Akiyama, N, Ishiguro, K, Shirouzu, M, Suzuki, T. | Deposit date: | 2024-03-27 | Release date: | 2024-11-06 | Method: | ELECTRON MICROSCOPY (2.41 Å) | Cite: | A tRNA modification with aminovaleramide facilitates AUA decoding in protein synthesis. Nat.Chem.Biol., 2024
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8YUP
| E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA | Descriptor: | 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... | Authors: | Akiyama, N, Ishiguro, K, Shirouzu, M, Suzuki, T. | Deposit date: | 2024-03-28 | Release date: | 2024-11-06 | Method: | ELECTRON MICROSCOPY (2.39 Å) | Cite: | A tRNA modification with aminovaleramide facilitates AUA decoding in protein synthesis. Nat.Chem.Biol., 2024
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3W1Z
| Heat shock protein 16.0 from Schizosaccharomyces pombe | Descriptor: | Heat shock protein 16 | Authors: | Hanazono, Y, Takeda, K, Akiyama, N, Aikawa, Y, Miki, K. | Deposit date: | 2012-11-26 | Release date: | 2013-03-13 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.401 Å) | Cite: | Nonequivalence Observed for the 16-Meric Structure of a Small Heat Shock Protein, SpHsp16.0, from Schizosaccharomyces pombe Structure, 21, 2013
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5B7V
| Human FGFR1 kinase in complex with CH5183284 | Descriptor: | Fibroblast growth factor receptor 1, SULFATE ION, [5-amino-1-(2-methyl-1H-benzimidazol-6-yl)-1H-pyrazol-4-yl](1H-indol-2-yl)methanone | Authors: | Fukami, T.A, Lukacs, C.M, Janson, C. | Deposit date: | 2016-06-09 | Release date: | 2016-06-22 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | The fibroblast growth factor receptor genetic status as a potential predictor of the sensitivity to CH5183284/Debio 1347, a novel selective FGFR inhibitor Mol.Cancer Ther., 13, 2014
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4Y1P
| Crystal structure of 3-isopropylmalate dehydrogenase (Saci_0600) from Sulfolobus acidocaldarius complex with 3-isopropylmalate and Mg2+ | Descriptor: | 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION, ... | Authors: | Takahashi, K, Tomita, T, Kuzuyama, T, Nishiyama, M. | Deposit date: | 2015-02-08 | Release date: | 2016-03-09 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Characterization of two beta-decarboxylating dehydrogenases from Sulfolobus acidocaldarius Extremophiles, 20, 2016
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