1ODK
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5XOG
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![BU of 5xog by Molmil](/molmil-images/mine/5xog) | RNA Polymerase II elongation complex bound with Spt5 KOW5 and Elf1 | Descriptor: | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA (30-MER), DNA (39-MER), ... | Authors: | Ehara, H, Shirouzu, M, Sekine, S. | Deposit date: | 2017-05-28 | Release date: | 2017-08-16 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Structure of the complete elongation complex of RNA polymerase II with basal factors Science, 357, 2017
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3OEP
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![BU of 3oep by Molmil](/molmil-images/mine/3oep) | Crystal structure of TTHA0988 in space group P43212 | Descriptor: | GLYCEROL, Putative uncharacterized protein TTHA0988, SULFATE ION | Authors: | Jacques, D.A, Langley, D.B, Trewhella, J, Guss, J.M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2010-08-13 | Release date: | 2010-11-24 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | The structure of TTHA0988 from Thermus thermophilus, a KipI-KipA homologue incorrectly annotated as an allophanate hydrolase Acta Crystallogr.,Sect.D, 67, 2011
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1ODE
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1OD6
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![BU of 1od6 by Molmil](/molmil-images/mine/1od6) | The Crystal Structure of Phosphopantetheine adenylyltransferase from Thermus Thermophilus in complex with 4'-phosphopantetheine | Descriptor: | 4'-PHOSPHOPANTETHEINE, PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE, SULFATE ION | Authors: | Takahashi, H, Inagaki, E, Miyano, M, Tahirov, T.H. | Deposit date: | 2003-02-13 | Release date: | 2003-03-13 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structure and Implications for the Thermal Stability of Phosphopantetheine Adenylyltransferase from Thermus Thermophilus. Acta Crystallogr.,Sect.D, 60, 2004
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1ODL
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![BU of 1odl by Molmil](/molmil-images/mine/1odl) | PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS | Descriptor: | CHLORIDE ION, GLYCEROL, PURINE NUCLEOSIDE PHOSPHORYLASE, ... | Authors: | Tahirov, T.H, Inagaki, E, Miyano, M. | Deposit date: | 2003-02-19 | Release date: | 2003-02-27 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus J.Mol.Biol., 337, 2004
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1ODI
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1ODJ
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3INZ
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![BU of 3inz by Molmil](/molmil-images/mine/3inz) | H57T Hfq from Pseudomonas aeruginosa | Descriptor: | CADMIUM ION, CHLORIDE ION, Protein hfq, ... | Authors: | Moskaleva, O, Melnik, B, Gabdulkhakov, A, Garber, M, Nikonov, S, Stolboushkina, E, Nikulin, A. | Deposit date: | 2009-08-13 | Release date: | 2010-08-04 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | The structures of mutant forms of Hfq from Pseudomonas aeruginosa reveal the importance of the conserved His57 for the protein hexamer organization. Acta Crystallogr.,Sect.F, 66, 2010
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3W7B
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![BU of 3w7b by Molmil](/molmil-images/mine/3w7b) | Crystal structure of formyltetrahydrofolate deformylase from Thermus thermophilus HB8 | Descriptor: | Formyltetrahydrofolate deformylase | Authors: | Sampei, G, Yanagida, Y, Ogata, N, Kusano, M, Terao, K, Kawai, H, Fukai, Y, Kanagawa, M, Inoue, Y, Baba, S, Kawai, G. | Deposit date: | 2013-02-28 | Release date: | 2014-01-08 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.71 Å) | Cite: | Structures and reaction mechanisms of the two related enzymes, PurN and PurU J.Biochem., 154, 2013
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3IEM
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![BU of 3iem by Molmil](/molmil-images/mine/3iem) | Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog | Descriptor: | CITRATE ANION, RNA (5'-R(*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU))-3'), Ribonuclease TTHA0252, ... | Authors: | Ishikawa, H, Nakagawa, N, Kuramitus, S, Yokoyama, S, Masui, R. | Deposit date: | 2009-07-23 | Release date: | 2010-07-28 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog To be Published
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5AVM
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![BU of 5avm by Molmil](/molmil-images/mine/5avm) | Crystal structures of 5-aminoimidazole ribonucleotide (AIR) synthetase, PurM, from Thermus thermophilus | Descriptor: | Phosphoribosylformylglycinamidine cyclo-ligase, SULFATE ION | Authors: | Kanagawa, M, Baba, S, Watanabe, Y, Nakagawa, N, Ebihara, A, Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2015-06-23 | Release date: | 2015-11-25 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structures and ligand binding of PurM proteins from Thermus thermophilus and Geobacillus kaustophilus J.Biochem., 159, 2016
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5AYQ
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2YVO
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![BU of 2yvo by Molmil](/molmil-images/mine/2yvo) | Crystal structure of NDX2 in complex with MG2+ and AMP from thermus thermophilus HB8 | Descriptor: | ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, MutT/nudix family protein | Authors: | Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-04-13 | Release date: | 2008-02-26 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.67 Å) | Cite: | Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8 J.Bacteriol., 190, 2008
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2YYB
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![BU of 2yyb by Molmil](/molmil-images/mine/2yyb) | Crystal structure of TTHA1606 from Thermus thermophilus HB8 | Descriptor: | Hypothetical protein TTHA1606 | Authors: | Tomoike, F, Nakagwa, N, Ebihara, A, Yokoyama, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-04-28 | Release date: | 2008-05-06 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8. Proteins, 76, 2009
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2RS8
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![BU of 2rs8 by Molmil](/molmil-images/mine/2rs8) | Solution structure of the N-terminal RNA recognition motif of NonO | Descriptor: | Non-POU domain-containing octamer-binding protein | Authors: | Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2011-11-29 | Release date: | 2012-12-19 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Solution structure of the N-terminal RNA recognition motif of NonO To be Published
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3IEK
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![BU of 3iek by Molmil](/molmil-images/mine/3iek) | Crystal Structure of native TTHA0252 from Thermus thermophilus HB8 | Descriptor: | CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ... | Authors: | Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R. | Deposit date: | 2009-07-22 | Release date: | 2010-07-28 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Crystal Structure of native TTHA0252 from Thermus thermophilus HB8 To be Published
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3IEL
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![BU of 3iel by Molmil](/molmil-images/mine/3iel) | Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with UMP | Descriptor: | CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ... | Authors: | Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R. | Deposit date: | 2009-07-23 | Release date: | 2010-07-28 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with UMP To be Published
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3IE1
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![BU of 3ie1 by Molmil](/molmil-images/mine/3ie1) | Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA | Descriptor: | CITRATE ANION, RNA (5'-R(P*UP*UP*UP*U)-3'), Ribonuclease TTHA0252, ... | Authors: | Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2009-07-22 | Release date: | 2009-08-04 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.85 Å) | Cite: | Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA To be Published
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3IE2
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![BU of 3ie2 by Molmil](/molmil-images/mine/3ie2) | Crystal Structure of H400V mutant TTHA0252 from Thermus thermophilus HB8 | Descriptor: | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Ribonuclease TTHA0252, SULFATE ION, ... | Authors: | Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2009-07-22 | Release date: | 2009-08-04 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal Structure of H400V mutant TTHA0252 from Thermus thermophilus HB8 To be Published
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3IDZ
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![BU of 3idz by Molmil](/molmil-images/mine/3idz) | Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8 | Descriptor: | CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ... | Authors: | Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2009-07-22 | Release date: | 2009-08-04 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8 To be Published
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3IE0
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![BU of 3ie0 by Molmil](/molmil-images/mine/3ie0) | Crystal Structure of S378Y mutant TTHA0252 from Thermus thermophilus HB8 | Descriptor: | CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ... | Authors: | Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2009-07-22 | Release date: | 2009-08-04 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.73 Å) | Cite: | Crystal Structure of S378Y mutant TTHA0252 from Thermus thermophilus HB8 To be Published
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4S35
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![BU of 4s35 by Molmil](/molmil-images/mine/4s35) | AMPPCP and TMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5 | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ... | Authors: | Biswas, A, Jeyakanthan, J, Sekar, K, Kuramitsu, S, Yokoyama, S. | Deposit date: | 2015-01-26 | Release date: | 2016-01-27 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate. Febs J., 284, 2017
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5TMC
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![BU of 5tmc by Molmil](/molmil-images/mine/5tmc) | Re-refinement of Thermus thermopiles DNA-directed RNA polymerase structure | Descriptor: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | Authors: | Wang, J. | Deposit date: | 2016-10-12 | Release date: | 2016-11-23 | Last modified: | 2019-02-20 | Method: | X-RAY DIFFRACTION (2.71 Å) | Cite: | On the validation of crystallographic symmetry and the quality of structures. Protein Sci., 24, 2015
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3SWG
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![BU of 3swg by Molmil](/molmil-images/mine/3swg) | AQUIFEX AEOLICUS MurA in complex with UDP-N-acetylmuramic acid and covalent adduct of PEP with Cys124 | Descriptor: | (2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ... | Authors: | Zhu, J.-Y, Schonbrunn, E. | Deposit date: | 2011-07-13 | Release date: | 2012-03-14 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (1.81 Å) | Cite: | Functional Consequence of Covalent Reaction of Phosphoenolpyruvate with UDP-N-acetylglucosamine 1-Carboxyvinyltransferase (MurA). J.Biol.Chem., 287, 2012
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