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2DU7
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BU of 2du7 by Molmil
Crystal structure of Methanococcus jannacshii O-phosphoseryl-tRNA synthetase
Descriptor: O-phosphoseryl-tRNA synthetase
Authors:Fukunaga, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-20
Release date:2007-03-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural insights into the first step of RNA-dependent cysteine biosynthesis in archaea.
Nat.Struct.Mol.Biol., 14, 2007
2DDS
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BU of 2dds by Molmil
Crystal structure of sphingomyelinase from Bacillus cereus with cobalt ion
Descriptor: COBALT (II) ION, Sphingomyelin phosphodiesterase
Authors:Ago, H, Oda, M, Takahashi, M, Tsuge, H, Ochi, S, Katunuma, N, Miyano, M, Sakurai, J, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-02
Release date:2006-05-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of the Sphingomyelin Phosphodiesterase Activity in Neutral Sphingomyelinase from Bacillus cereus.
J.Biol.Chem., 281, 2006
2DEH
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BU of 2deh by Molmil
Crystal structure of tt0972 protein form Thermus Thermophilus with Cl(-) ions
Descriptor: CHLORIDE ION, SODIUM ION, tt0972 protein
Authors:Inagaki, E, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-10
Release date:2007-05-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of tt0972 protein form Thermus Thermophilus
To be Published
2DRV
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BU of 2drv by Molmil
Structure of PH1069 protein from Pyrococcus horikoshii OT3
Descriptor: SULFATE ION, UPF0130 protein PH1069
Authors:Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-06-15
Release date:2007-10-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of PH1069 protein from Pyrococcus horikoshii OT3
To be Published
2DT7
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BU of 2dt7 by Molmil
Solution structure of the second SURP domain of human splicing factor SF3a120 in complex with a fragment of human splicing factor SF3a60
Descriptor: Splicing factor 3 subunit 1, Splicing factor 3A subunit 3
Authors:He, F, Kuwasako, K, Inoue, M, Guntert, P, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-11
Release date:2006-12-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of the SURP domains and the subunit-assembly mechanism within the splicing factor SF3a complex in 17S U2 snRNP
Structure, 14, 2006
2DUY
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BU of 2duy by Molmil
Crystal structure of competence protein ComEA-related protein from Thermus thermophilus HB8
Descriptor: CHLORIDE ION, Competence protein ComEA-related protein
Authors:Niwa, H, Shimada, A, Chen, L, Liu, Z.-J, Wang, B.-C, Ebihara, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-27
Release date:2007-08-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of competence protein ComEA-related protein from Thermus thermophilus HB8
To be Published
2DIW
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BU of 2diw by Molmil
Solution structure of the RPR domain of Putative RNA-binding protein 16
Descriptor: Putative RNA-binding protein 16
Authors:Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-30
Release date:2006-09-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RPR domain of Putative RNA-binding protein 16
To be Published
2DEV
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BU of 2dev by Molmil
Crystal structure of tt0972 protein from Thermus Thermophilus with Cs(+) ions
Descriptor: CESIUM ION, CHLORIDE ION, SODIUM ION, ...
Authors:Inagaki, E, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-17
Release date:2007-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of tt0972 protein from Thermus Thermophilus
To be Published
2DJ0
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BU of 2dj0 by Molmil
The solution structure of the thioredoxin domain of human Thioredoxin-related transmembrane protein 2
Descriptor: Thioredoxin-related transmembrane protein 2
Authors:Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-30
Release date:2006-09-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of the thioredoxin domain of human Thioredoxin-related transmembrane protein 2
To be Published
2DUL
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BU of 2dul by Molmil
Crystal structure of tRNA G26 methyltransferase Trm1 in apo form from Pyrococcus horikoshii
Descriptor: GLYCEROL, N(2),N(2)-dimethylguanosine tRNA methyltransferase
Authors:Ihsanawati, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-24
Release date:2007-01-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of tRNA N(2),N(2)-Guanosine Dimethyltransferase Trm1 from Pyrococcus horikoshii
J.Mol.Biol., 383, 2008
2DVS
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BU of 2dvs by Molmil
Crystal structure analysis of the N-terminal bromodomain of human BRD2 complexed with acetylated histone H4 peptide
Descriptor: bromodomain-containing protein 2, histone H4
Authors:Nakamura, Y, Umehara, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis for Acetylated Histone H4 Recognition by the Human BRD2 Bromodomain.
J.Biol.Chem., 285, 2010
2DDR
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BU of 2ddr by Molmil
Crystal structure of sphingomyelinase from Bacillus cereus with calcium ion
Descriptor: CALCIUM ION, Sphingomyelin phosphodiesterase
Authors:Ago, H, Oda, M, Takahashi, M, Tsuge, H, Ochi, S, Katunuma, N, Miyano, M, Sakurai, J, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-02
Release date:2006-05-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Basis of the Sphingomyelin Phosphodiesterase Activity in Neutral Sphingomyelinase from Bacillus cereus.
J.Biol.Chem., 281, 2006
2DEG
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BU of 2deg by Molmil
Crystal structure of tt0972 protein form Thermus Thermophilus with Mn2(+) ions
Descriptor: GLYCEROL, MANGANESE (II) ION, SODIUM ION, ...
Authors:Inagaki, E, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-10
Release date:2007-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of tt0972 protein form Thermus Thermophilus
To be Published
2DVR
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BU of 2dvr by Molmil
Crystal structure analysis of the N-terminal bromodomain of human BRD2 complexed with acetylated histone H4 peptide
Descriptor: bromodomain-containing protein 2, histone H4
Authors:Nakamura, Y, Umehara, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Acetylated Histone H4 Recognition by the Human BRD2 Bromodomain.
J.Biol.Chem., 285, 2010
2DGB
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BU of 2dgb by Molmil
Structure of Thermus thermophilus PurS in the P21 Form
Descriptor: hypothetical protein PurS
Authors:Yanai, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-10
Release date:2006-09-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Thermus thermophilus PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway
To be published
2DDZ
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BU of 2ddz by Molmil
Protein of Unknown Function from Pyrococcus horikoshi
Descriptor: 190aa long hypothetical protein, GLYCEROL, GUANIDINE
Authors:Rehse, P.H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-07
Release date:2007-02-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:X-ray structure of Unknown Protein from Pyrococcus horikoshi
To be Published
2DNA
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BU of 2dna by Molmil
Solution Structure of RSGI RUH-056, a UBA domain from mouse cDNA
Descriptor: unnamed protein product
Authors:Ruhul Momen, A.Z.M, Hirota, H, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-25
Release date:2006-10-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-056, a UBA domain from mouse cDNA
To be published
2DPW
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BU of 2dpw by Molmil
Hpothetical Transferase Structure from Thermus thermophilus
Descriptor: Hypothetical protein TTHA0179, SODIUM ION
Authors:Rehse, P.H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-17
Release date:2007-05-22
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Hypothetical Transferase from Thermus thermophilus
To be Published
2DRH
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BU of 2drh by Molmil
Crystal structure of the PH0078 protein from Pyrococcus horikoshii OT3
Descriptor: 361aa long hypothetical D-aminopeptidase, CHLORIDE ION
Authors:Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-06-09
Release date:2006-12-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the PH0078 protein from Pyrococcus horikoshii OT3
To be Published
2DVQ
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BU of 2dvq by Molmil
Crystal structure analysis of the N-terminal bromodomain of human BRD2 complexed with acetylated histone H4 peptide
Descriptor: Bromodomain-containing protein 2, histone H4
Authors:Nakamura, Y, Umehara, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis for Acetylated Histone H4 Recognition by the Human BRD2 Bromodomain.
J.Biol.Chem., 285, 2010
2E7W
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BU of 2e7w by Molmil
Crystal structure of the Lrp/AsnC like transcriptional regulators from Sulfolobus tokodaii 7
Descriptor: 150aa long hypothetical transcriptional regulator, GLUTAMINE, MAGNESIUM ION
Authors:Kumarevel, T.S, Karthe, P, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-15
Release date:2008-01-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA binding.
Nucleic Acids Res., 36, 2008
2E7X
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BU of 2e7x by Molmil
Structure of the Lrp/AsnC like transcriptional regulator from Sulfolobus tokodaii 7 complexed with its cognate ligand
Descriptor: 150aa long hypothetical transcriptional regulator, GLUTAMINE, MAGNESIUM ION
Authors:Kumarevel, T.S, Karthe, P, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-15
Release date:2008-01-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA binding.
Nucleic Acids Res., 36, 2008
2E8E
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BU of 2e8e by Molmil
Crystal Structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5 (Reduced form)
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Hypothetical protein Aq_1549
Authors:Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2008-01-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5
To be Published
2EFN
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BU of 2efn by Molmil
Crystal Structure of Ser 32 to Ala of ST1022 from Sulfolobus tokodaii 7
Descriptor: 150aa long hypothetical transcriptional regulator, MAGNESIUM ION
Authors:Kumarevel, T.S, Karthe, P, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-23
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA binding.
Nucleic Acids Res., 36, 2008
2EGR
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BU of 2egr by Molmil
Crystal Structure of Hypothetical Protein(AQ1494) from Aquifex aeolicus
Descriptor: Hypothetical protein aq_1494
Authors:Kumarevel, T.S, Niwa, H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-02
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Hypothetical Protein(AQ1494) from Aquifex aeolicus
To be Published

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