6SMQ
 
 | | Structure of the RagAB peptide importer in the 'open-closed' state | | Descriptor: | (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Lipoprotein RagB, ... | | Authors: | White, J.B.R, Ranson, N.A, van den Berg, B. | | Deposit date: | 2019-08-22 | | Release date: | 2020-05-20 | | Last modified: | 2020-08-05 | | Method: | ELECTRON MICROSCOPY (3.3 Å) | | Cite: | Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
|
|
8BMY
 | | Bacteroides thetaiotaomicron surface lipoprotein bound to cyanocobalamin | | Descriptor: | CHLORIDE ION, CYANOCOBALAMIN, Putative surface layer protein, ... | | Authors: | Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B. | | Deposit date: | 2022-11-11 | | Release date: | 2023-08-16 | | Last modified: | 2023-09-20 | | Method: | X-RAY DIFFRACTION (1.72 Å) | | Cite: | BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
|
|
8BN0
 | | Bacteroides thetaiotaomicron surface protein BT1954 bound to | | Descriptor: | CHLORIDE ION, COB(II)INAMIDE, CYANIDE ION, ... | | Authors: | Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B. | | Deposit date: | 2022-11-11 | | Release date: | 2023-08-16 | | Last modified: | 2024-06-19 | | Method: | X-RAY DIFFRACTION (1.33 Å) | | Cite: | BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
|
|
8BMX
 | | Bacteroides thetaiotaomicron B12 TonB dependent transporter in complex with a surface lipoprotein | | Descriptor: | Putative TonB-linked outer membrane receptor, YncE family protein | | Authors: | Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B. | | Deposit date: | 2022-11-11 | | Release date: | 2023-09-20 | | Method: | X-RAY DIFFRACTION (3.72 Å) | | Cite: | BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
|
|
1TLZ
 | | Tsx structure complexed with uridine | | Descriptor: | Nucleoside-specific channel-forming protein tsx, URIDINE | | Authors: | Ye, J, van den Berg, B. | | Deposit date: | 2004-06-10 | | Release date: | 2004-08-24 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Crystal structure of the bacterial nucleoside transporter Tsx.
Embo J., 23, 2004
|
|
1TLY
 | | Tsx structure | | Descriptor: | Nucleoside-specific channel-forming protein tsx | | Authors: | Ye, J, van den Berg, B. | | Deposit date: | 2004-06-10 | | Release date: | 2004-08-24 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (3.01 Å) | | Cite: | Crystal structure of the bacterial nucleoside transporter Tsx.
Embo J., 23, 2004
|
|
1TLW
 | | Tsx structure complexed with thymidine | | Descriptor: | Nucleoside-specific channel-forming protein tsx, THYMIDINE | | Authors: | Ye, J, van den Berg, B. | | Deposit date: | 2004-06-10 | | Release date: | 2004-08-24 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Crystal structure of the bacterial nucleoside transporter Tsx.
Embo J., 23, 2004
|
|
4KAX
 | | Crystal structure of the Grp1 PH domain in complex with Arf6-GTP | | Descriptor: | ADP-ribosylation factor 6, CITRIC ACID, Cytohesin-3, ... | | Authors: | Lambright, D.G, Malaby, A.W, van den Berg, B. | | Deposit date: | 2013-04-23 | | Release date: | 2013-08-14 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (1.85 Å) | | Cite: | Structural basis for membrane recruitment and allosteric activation of cytohesin family Arf GTPase exchange factors.
Proc.Natl.Acad.Sci.USA, 110, 2013
|
|
2X4M
 | | Yersinia Pestis Plasminogen Activator Pla | | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COAGULASE/FIBRINOLYSIN, SULFATE ION | | Authors: | Eren, E, Murphy, M, Goguen, J, van den Berg, B. | | Deposit date: | 2010-02-05 | | Release date: | 2010-07-28 | | Last modified: | 2024-05-08 | | Method: | X-RAY DIFFRACTION (2.55 Å) | | Cite: | An Active Site Water Network in the Plasminogen Activator Pla from Yersinia Pestis
Structure, 18, 2010
|
|
3BS0
 | |
2R4N
 | | Crystal structure of the long-chain fatty acid transporter FadL mutant N33A | | Descriptor: | LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein | | Authors: | Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B. | | Deposit date: | 2007-08-31 | | Release date: | 2008-09-16 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (3.2 Å) | | Cite: | Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
|
|
2R4P
 | | Crystal structure of the long-chain fatty acid transporter FadL mutant G212E | | Descriptor: | LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein | | Authors: | Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B. | | Deposit date: | 2007-08-31 | | Release date: | 2008-09-16 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (2.9 Å) | | Cite: | Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
|
|
2R89
 | | Crystal structure of the long-chain fatty acid transporter FadL mutant delta N3 | | Descriptor: | Long-chain fatty acid transport protein | | Authors: | Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B. | | Deposit date: | 2007-09-10 | | Release date: | 2008-09-23 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (3.4 Å) | | Cite: | From the Cover: Ligand-gated diffusion across the bacterial outer membrane.
Proc.Natl.Acad.Sci.USA, 108, 2011
|
|
2R8A
 | | Crystal structure of the long-chain fatty acid transporter FadL mutant delta N8 | | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Long-chain fatty acid transport protein | | Authors: | Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B. | | Deposit date: | 2007-09-10 | | Release date: | 2008-09-23 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (3 Å) | | Cite: | From the Cover: Ligand-gated diffusion across the bacterial outer membrane.
Proc.Natl.Acad.Sci.USA, 108, 2011
|
|
2R4L
 | | Crystal structure of the long-chain fatty acid transporter FadL mutant P34A | | Descriptor: | LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein | | Authors: | Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B. | | Deposit date: | 2007-08-31 | | Release date: | 2008-09-16 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (3.3 Å) | | Cite: | Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
|
|
2R4O
 | | Crystal structure of the long-chain fatty acid transporter FadL mutant delta NPA | | Descriptor: | LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein | | Authors: | Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B. | | Deposit date: | 2007-08-31 | | Release date: | 2008-09-16 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (3.6 Å) | | Cite: | Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
|
|
2R88
 | | Crystal structure of the long-chain fatty acid transporter FadL mutant delta S3 kink | | Descriptor: | Long-chain fatty acid transport protein | | Authors: | Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B. | | Deposit date: | 2007-09-10 | | Release date: | 2008-09-23 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
|
|
4FOZ
 | | Crystal Structure of OccD1 (OprD) Y282R/D307H | | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Porin D | | Authors: | Eren, E, van den Berg, B. | | Deposit date: | 2012-06-21 | | Release date: | 2013-03-13 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Toward Understanding the Outer Membrane Uptake of Small Molecules by Pseudomonas aeruginosa.
J.Biol.Chem., 288, 2013
|
|
2F1C
 | |
4FRT
 | |
4FSO
 | |
4FUV
 | | Crystal Structure of Acinetobacter baumannii CarO | | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, porin protein associated with imipenem resistance | | Authors: | Eren, E, van den Berg, B. | | Deposit date: | 2012-06-28 | | Release date: | 2013-07-10 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (2.151 Å) | | Cite: | Outer membrane transport of amino acids and antibiotics by an 8-stranded b-barrel protein
To be Published
|
|
4FRX
 | |
4FSP
 | |
4FT6
 | |
