Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3JYM
DownloadVisualize
BU of 3jym by Molmil
Crystal Structure of the 3 FKBP domains of wheat FKBP73
Descriptor: FK506-binding protein (FKBP) from wheat
Authors:Dym, O, Breiman, A, Israel Structural Proteomics Center (ISPC)
Deposit date:2009-09-22
Release date:2010-06-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of the three FK506 binding protein domains of wheat FKBP73: evidence for a unique wFK73_2 domain
J.STRUCT.FUNCT.GENOM., 11, 2010
2YKM
DownloadVisualize
BU of 2ykm by Molmil
Crystal structure of HIV-1 Reverse Transcriptase (RT) in complex with a Difluoromethylbenzoxazole (DFMB) Pyrimidine Thioether derivative, a non-nucleoside RT inhibitor (NNRTI)
Descriptor: 2-[DIFLUORO-[(4-METHYL-PYRIMIDINYL)-THIO]METHYL]-BENZOXAZOLE, CALCIUM ION, REVERSE TRANSCRIPTASE/RIBONUCLEASE H
Authors:Boyer, J, Arnoult, E, Medebielle, M, Guillemont, J, Unge, T, Unge, J, Jochmans, D.
Deposit date:2011-05-28
Release date:2011-08-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Difluoromethylbenzoxazole Pyrimidine Thioether Derivatives: A Novel Class of Potent Non-Nucleoside HIV-1 Reverse Transcriptase Inhibitors.
J.Med.Chem., 54, 2011
2YKN
DownloadVisualize
BU of 2ykn by Molmil
Crystal structure of HIV-1 Reverse Transcriptase (RT) in complex with a Difluoromethylbenzoxazole (DFMB) Pyrimidine Thioether derivative, a non-nucleoside RT inhibitor (NNRTI)
Descriptor: 2-[DIFLUORO-[(4-METHYL-PYRIMIDINYL)-THIO]METHYL]-BENZOXAZOLE, CALCIUM ION, REVERSE TRANSCRIPTASE/RIBONUCLEASE H
Authors:Boyer, J, Arnoult, E, Medebielle, M, Guillemont, J, Unge, T, Unge, J, Jochmans, D.
Deposit date:2011-05-28
Release date:2011-08-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Difluoromethylbenzoxazole Pyrimidine Thioether Derivatives: A Novel Class of Potent Non-Nucleoside HIV-1 Reverse Transcriptase Inhibitors.
J.Med.Chem., 54, 2011
4A03
DownloadVisualize
BU of 4a03 by Molmil
Crystal Structure of Mycobacterium tuberculosis DXR in complex with the antibiotic FR900098 and cofactor NADPH
Descriptor: 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, 3-[ethanoyl(hydroxy)amino]propylphosphonic acid, GLYCEROL, ...
Authors:Bjorkelid, C, Bergfors, T, Jones, T.A.
Deposit date:2011-09-07
Release date:2012-01-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Studies on Mycobacterium Tuberculosis Dxr in Complex with the Antibiotic Fr-900098.
Acta Crystallogr.,Sect.D, 68, 2012
1BMS
DownloadVisualize
BU of 1bms by Molmil
CRYSTAL STRUCTURE OF MS2 CAPSIDS WITH MUTATIONS IN THE SUBUNIT FG LOOP
Descriptor: BACTERIOPHAGE MS2 CAPSID
Authors:Liljas, L, Stonehouse, N.J.
Deposit date:1995-08-29
Release date:1996-03-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of MS2 capsids with mutations in the subunit FG loop.
J.Mol.Biol., 256, 1996
2MS2
DownloadVisualize
BU of 2ms2 by Molmil
THE REFINED STRUCTURE OF BACTERIOPHAGE MS2 AT 2.8 ANGSTROMS RESOLUTION
Descriptor: BACTERIOPHAGE MS2 COAT PROTEIN
Authors:Valegard, K, Liljas, L.
Deposit date:1994-08-23
Release date:1995-01-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The refined structure of bacteriophage MS2 at 2.8 A resolution.
J.Mol.Biol., 234, 1993
2WA2
DownloadVisualize
BU of 2wa2 by Molmil
Structure of the methyltransferase domain from Modoc Virus, a Flavivirus with No Known Vector (NKV)
Descriptor: NON-STRUCTURAL PROTEIN 5, S-ADENOSYLMETHIONINE, SULFATE ION
Authors:Jansson, A.M, Johansson, P, Jones, T.A.
Deposit date:2009-02-02
Release date:2009-08-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Methyltransferase Domain from the Modoc Virus, a Flavivirus with No Known Vector.
Acta Crystallogr.,Sect.D, 65, 2009
1CBR
DownloadVisualize
BU of 1cbr by Molmil
CRYSTAL STRUCTURE OF CELLULAR RETINOIC-ACID-BINDING PROTEINS I AND II IN COMPLEX WITH ALL-TRANS-RETINOIC ACID AND A SYNTHETIC RETINOID
Descriptor: CELLULAR RETINOIC ACID BINDING PROTEIN TYPE I, RETINOIC ACID
Authors:Kleywegt, G.J, Bergfors, T, Jones, T.A.
Deposit date:1994-09-28
Release date:1995-01-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of cellular retinoic acid binding proteins I and II in complex with all-trans-retinoic acid and a synthetic retinoid.
Structure, 2, 1994
2CE3
DownloadVisualize
BU of 2ce3 by Molmil
CRYSTAL STRUCTURE OF THE ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 (CLPP1) FROM MYCOBACTERIUM TUBERCULOSIS
Descriptor: ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1
Authors:Segelke, B, Kim, C.Y, Ortiz-Lombardia, M, Alzari, P.M, Lekin, T.
Deposit date:2006-02-03
Release date:2006-02-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights Into the Inter-Ring Plasticity of Caseinolytic Proteases from the X-Ray Structure of Mycobacterium Tuberculosis Clpp1.
Acta Crystallogr.,Sect.D, 63, 2007
1CBS
DownloadVisualize
BU of 1cbs by Molmil
CRYSTAL STRUCTURE OF CELLULAR RETINOIC-ACID-BINDING PROTEINS I AND II IN COMPLEX WITH ALL-TRANS-RETINOIC ACID AND A SYNTHETIC RETINOID
Descriptor: CELLULAR RETINOIC ACID BINDING PROTEIN TYPE II, RETINOIC ACID
Authors:Kleywegt, G.J, Bergfors, T, Jones, T.A.
Deposit date:1994-09-28
Release date:1995-01-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of cellular retinoic acid binding proteins I and II in complex with all-trans-retinoic acid and a synthetic retinoid.
Structure, 2, 1994
1CBQ
DownloadVisualize
BU of 1cbq by Molmil
CRYSTAL STRUCTURE OF CELLULAR RETINOIC-ACID-BINDING PROTEINS I AND II IN COMPLEX WITH ALL-TRANS-RETINOIC ACID AND A SYNTHETIC RETINOID
Descriptor: 6-(2,3,4,5,6,7-HEXAHYDRO-2,4,4-TRIMETHYL-1-METYLENEINDEN-2-YL)-3-METHYLHEXA-2,4-DIENOIC ACID, CELLULAR RETINOIC ACID BINDING PROTEIN TYPE II, PHOSPHATE ION
Authors:Kleywegt, G.J, Bergfors, T, Jones, T.A.
Deposit date:1994-09-28
Release date:1995-01-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of cellular retinoic acid binding proteins I and II in complex with all-trans-retinoic acid and a synthetic retinoid.
Structure, 2, 1994
1MST
DownloadVisualize
BU of 1mst by Molmil
CRYSTAL STRUCTURE OF MS2 CAPSIDS WITH MUTATIONS IN THE SUBUNIT FG LOOP
Descriptor: BACTERIOPHAGE MS2 CAPSID
Authors:Liljas, L, Stonehouse, N.J.
Deposit date:1995-08-30
Release date:1996-03-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of MS2 capsids with mutations in the subunit FG loop.
J.Mol.Biol., 256, 1996
2CBY
DownloadVisualize
BU of 2cby by Molmil
Crystal structure of the ATP-dependent Clp Protease proteolytic subunit 1 (ClpP1) from Mycobacterium tuberculosis
Descriptor: ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1
Authors:Mate, M.J, Portnoi, D, Alzari, P.M, Ortiz-Lombardia, M.
Deposit date:2006-01-10
Release date:2006-01-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights Into the Inter-Ring Plasticity of Caseinolytic Proteases from the X-Ray Structure of Mycobacterium Tuberculosis Clpp1.
Acta Crystallogr.,Sect.D, 63, 2007
2BES
DownloadVisualize
BU of 2bes by Molmil
Structure of Mycobacterium tuberculosis Ribose-5-Phosphate Isomerase, RpiB, Rv2465c, in complex with 4-phospho-D-erythronohydroxamic acid.
Descriptor: 4-PHOSPHO-D-ERYTHRONOHYDROXAMIC ACID, CARBOHYDRATE-PHOSPHATE ISOMERASE
Authors:Roos, A.K, Ericsson, D.J, Mowbray, S.L.
Deposit date:2004-11-30
Release date:2004-12-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Competitive Inhibitors of Mycobacterium Tuberculosis Ribose-5-Phosphate Isomerase B Reveal New Information About the Reaction Mechanism.
J.Biol.Chem., 280, 2005
2BET
DownloadVisualize
BU of 2bet by Molmil
Structure of Mycobacterium tuberculosis Ribose-5-Phosphate Isomerase, RpiB, Rv2465c, in complex with 4-phospho-D-erythronate.
Descriptor: 4-PHOSPHO-D-ERYTHRONATE, CARBOHYDRATE-PHOSPHATE ISOMERASE
Authors:Roos, A.K, Ericsson, D.J, Mowbray, S.L.
Deposit date:2004-11-30
Release date:2004-12-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Competitive Inhibitors of Mycobacterium Tuberculosis Ribose-5-Phosphate Isomerase B Reveal New Information About the Reaction Mechanism
J.Biol.Chem., 280, 2005
2WA1
DownloadVisualize
BU of 2wa1 by Molmil
Structure of the methyltransferase domain from Modoc Virus, a Flavivirus with No Known Vector (NKV)
Descriptor: NON-STRUCTURAL PROTEIN 5, SULFATE ION
Authors:Jansson, A.M, Johansson, P, Jones, T.A.
Deposit date:2009-02-02
Release date:2009-08-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Methyltransferase Domain from the Modoc Virus, a Flavivirus with No Known Vector.
Acta Crystallogr.,Sect.D, 65, 2009
2BUK
DownloadVisualize
BU of 2buk by Molmil
SATELLITE TOBACCO NECROSIS VIRUS
Descriptor: CALCIUM ION, COAT PROTEIN
Authors:Jones, T.A, Liljas, L.
Deposit date:2005-06-14
Release date:2005-08-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of Satellite Tobacco Necrosis Virus After Crystallographic Refinement at 2.5 A Resolution.
J.Mol.Biol., 177, 1984
8A9Q
DownloadVisualize
BU of 8a9q by Molmil
Computational design of stable mammalian serum albumins for bacterial expression
Descriptor: Albumin, LAURIC ACID, MYRISTIC ACID, ...
Authors:Khersonsky, O, Dym, O, Fleishman, J.S.
Deposit date:2022-06-29
Release date:2023-05-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Stable Mammalian Serum Albumins Designed for Bacterial Expression.
J.Mol.Biol., 435, 2023
5Z1E
DownloadVisualize
BU of 5z1e by Molmil
MAP2K7 C218S mutant-inhibitor
Descriptor: Dual specificity mitogen-activated protein kinase kinase 7, N-[3-(6-methyl-1H-indazol-3-yl)phenyl]prop-2-enamide
Authors:Kinoshita, T, London, N.
Deposit date:2017-12-26
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Covalent Docking Identifies a Potent and Selective MKK7 Inhibitor.
Cell Chem Biol, 26, 2019
6GG1
DownloadVisualize
BU of 6gg1 by Molmil
Structure of PROSS-edited human interleukin 24
Descriptor: Interleukin-24, NICKEL (II) ION, SULFATE ION
Authors:Kolenko, P, Zahradnik, J, Kolarova, L, Schneider, B.
Deposit date:2018-05-02
Release date:2019-05-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Flexible regions govern promiscuous binding of IL-24 to receptors IL-20R1 and IL-22R1.
Febs J., 286, 2019
5Z1D
DownloadVisualize
BU of 5z1d by Molmil
MAP2K7 C276S mutant-inhibitor
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Dual specificity mitogen-activated protein kinase kinase 7, N-[3-(6-methyl-1H-indazol-3-yl)phenyl]prop-2-enamide
Authors:Kinoshita, T, London, N.
Deposit date:2017-12-26
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Covalent Docking Identifies a Potent and Selective MKK7 Inhibitor.
Cell Chem Biol, 26, 2019
5NB5
DownloadVisualize
BU of 5nb5 by Molmil
Principles for computational design of antibodies
Descriptor: design of antibodies
Authors:Dym, O, Fleishman, S.J.
Deposit date:2017-03-01
Release date:2017-09-27
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Principles for computational design of binding antibodies.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5NBI
DownloadVisualize
BU of 5nbi by Molmil
Principles for computational design of antibodies
Descriptor: Design of antibodies
Authors:Dym, O, Fleishman, S.J.
Deposit date:2017-03-02
Release date:2017-09-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Principles for computational design of binding antibodies.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4U4M
DownloadVisualize
BU of 4u4m by Molmil
Crystal structure of 0.5M urea unfolded YagE, a KDG aldolase protein in complex with Pyruvate
Descriptor: 1,2-ETHANEDIOL, PYRUVIC ACID, UREA, ...
Authors:Manoj Kumar, P, Bhaskar, V, Manicka, S, Krishnaswamy, S.
Deposit date:2014-07-24
Release date:2015-07-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Crystal structure of 0.5M urea unfolded YagE, a KDG aldolase protein in complex with Pyruvate
To be published
6FS3
DownloadVisualize
BU of 6fs3 by Molmil
Phosphotriesterase PTE_A53_1
Descriptor: (2~{S})-2-methylpentanedioic acid, FORMIC ACID, Parathion hydrolase, ...
Authors:Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J.
Deposit date:2018-02-19
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of Bacterail Phosphotriesterase variant with high catalytic activity towards organophosphate nerve agents developed by use of structure-based design and molecular evolution
To Be Published

227111

건을2024-11-06부터공개중

PDB statisticsPDBj update infoContact PDBjnumon