5YL1
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 5yl1 by Molmil](/molmil-images/mine/5yl1) | T=1 subviral particle of Penaeus vannamei nodavirus capsid protein deletion mutant (delta 1-37 & 251-368) | Descriptor: | CALCIUM ION, Capsid protein | Authors: | Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J. | Deposit date: | 2017-10-16 | Release date: | 2018-12-12 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (3.12 Å) | Cite: | The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism. Commun Biol, 2, 2019
|
|
5XMJ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 5xmj by Molmil](/molmil-images/mine/5xmj) | Crystal structure of quinol:fumarate reductase from Desulfovibrio gigas | Descriptor: | DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... | Authors: | Guan, H.H, Hsieh, Y.C, Lin, P.R, Chen, C.J. | Deposit date: | 2017-05-15 | Release date: | 2018-06-06 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (3.6 Å) | Cite: | Structural insights into the electron/proton transfer pathways in the quinol:fumarate reductase from Desulfovibrio gigas. Sci Rep, 8, 2018
|
|
6AB5
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6ab5 by Molmil](/molmil-images/mine/6ab5) | Cryo-EM structure of T=1 Penaeus vannamei nodavirus | Descriptor: | Capsid protein | Authors: | Chen, N.C, Miyazaki, N, Yoshimura, M, Guan, H.H, Lin, C.C, Iwasaki, K, Chen, C.J. | Deposit date: | 2018-07-20 | Release date: | 2019-03-20 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.7 Å) | Cite: | The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism. Commun Biol, 2, 2019
|
|
6AB6
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6ab6 by Molmil](/molmil-images/mine/6ab6) | Cryo-EM structure of T=3 Penaeus vannamei nodavirus | Descriptor: | CALCIUM ION, Capsid protein | Authors: | Chen, N.C, Miyazaki, N, Yoshimura, M, Guan, H.H, Lin, C.C, Iwasaki, K, Chen, C.J. | Deposit date: | 2018-07-20 | Release date: | 2019-03-20 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism. Commun Biol, 2, 2019
|
|
8W4L
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8w4l by Molmil](/molmil-images/mine/8w4l) | Crystal structure of closed conformation of human immunoglobulin Fc in presence of EndoSz | Descriptor: | CHLORIDE ION, Immunoglobulin gamma-1 heavy chain, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J. | Deposit date: | 2023-08-24 | Release date: | 2024-07-03 | Last modified: | 2024-07-10 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism. Jacs Au, 4, 2024
|
|
8W4M
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8w4m by Molmil](/molmil-images/mine/8w4m) | Crystal structure of open conformation of human immunoglobulin Fc in presence of EndoSz | Descriptor: | Immunoglobulin gamma-1 heavy chain, ZINC ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | Authors: | Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J. | Deposit date: | 2023-08-24 | Release date: | 2024-07-03 | Last modified: | 2024-07-10 | Method: | X-RAY DIFFRACTION (2.18 Å) | Cite: | Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism. Jacs Au, 4, 2024
|
|
8W4G
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8w4g by Molmil](/molmil-images/mine/8w4g) | Crystal structure of EndoSz mutant D234M, from Streptococcus equi subsp. Zooepidemicus Sz105 | Descriptor: | CALCIUM ION, glycoside hydrolase | Authors: | Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J. | Deposit date: | 2023-08-24 | Release date: | 2024-07-03 | Last modified: | 2024-07-10 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism. Jacs Au, 4, 2024
|
|
8W4N
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8w4n by Molmil](/molmil-images/mine/8w4n) | Crystal structure of EndoSz mutant D234M, in space group P21, in complex with oligosaccharide G2S1 | Descriptor: | CALCIUM ION, Glycoside hydrolase, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | Authors: | Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J. | Deposit date: | 2023-08-24 | Release date: | 2024-07-03 | Last modified: | 2024-07-10 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism. Jacs Au, 4, 2024
|
|
8W4I
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8w4i by Molmil](/molmil-images/mine/8w4i) | Crystal structure of EndoSz mutant D234M in space group P21 | Descriptor: | CALCIUM ION, glycoside hydrolase | Authors: | Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J. | Deposit date: | 2023-08-24 | Release date: | 2024-07-03 | Last modified: | 2024-07-10 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism. Jacs Au, 4, 2024
|
|
7B21
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7b21 by Molmil](/molmil-images/mine/7b21) | The X183 domain from Cellvibrio japonicus Cbp2D | Descriptor: | 1,2-ETHANEDIOL, Carbohydrate binding protein, putative, ... | Authors: | Branch, J, Hemsworth, G.R. | Deposit date: | 2020-11-25 | Release date: | 2021-07-21 | Last modified: | 2021-09-29 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | C-type cytochrome-initiated reduction of bacterial lytic polysaccharide monooxygenases. Biochem.J., 478, 2021
|
|
7XPE
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7xpe by Molmil](/molmil-images/mine/7xpe) | Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 8.5 | Descriptor: | Capsid protein alpha | Authors: | Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C. | Deposit date: | 2022-05-04 | Release date: | 2023-02-08 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (3.32 Å) | Cite: | Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions. Nat Commun, 14, 2023
|
|
7XGZ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7xgz by Molmil](/molmil-images/mine/7xgz) | Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 7.5 | Descriptor: | Capsid protein alpha | Authors: | Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C. | Deposit date: | 2022-04-07 | Release date: | 2023-02-08 | Last modified: | 2024-07-03 | Method: | ELECTRON MICROSCOPY (3.24 Å) | Cite: | Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions Nat Commun, 14, 2023
|
|
7XPA
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7xpa by Molmil](/molmil-images/mine/7xpa) | Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 7.5 | Descriptor: | Capsid protein alpha | Authors: | Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C. | Deposit date: | 2022-05-04 | Release date: | 2023-02-08 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (3.33 Å) | Cite: | Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions. Nat Commun, 14, 2023
|
|
7XPD
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7xpd by Molmil](/molmil-images/mine/7xpd) | Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 6.5 | Descriptor: | Capsid protein alpha | Authors: | Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C. | Deposit date: | 2022-05-04 | Release date: | 2023-02-08 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (3.74 Å) | Cite: | Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions. Nat Commun, 14, 2023
|
|
7XPF
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7xpf by Molmil](/molmil-images/mine/7xpf) | Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 8.5 | Descriptor: | Capsid protein alpha | Authors: | Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C. | Deposit date: | 2022-05-04 | Release date: | 2023-02-08 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (3.13 Å) | Cite: | Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions. Nat Commun, 14, 2023
|
|
7XPB
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7xpb by Molmil](/molmil-images/mine/7xpb) | Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 6.5 | Descriptor: | Capsid protein alpha | Authors: | Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C. | Deposit date: | 2022-05-04 | Release date: | 2023-02-08 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (3.91 Å) | Cite: | Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions. Nat Commun, 14, 2023
|
|
7XPG
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7xpg by Molmil](/molmil-images/mine/7xpg) | Cryo-EM structure of the T=3 lake sinai virus 1 (delta-N48) virus-like capsid at pH 6.5 | Descriptor: | Capsid protein alpha, RNA (5'-R(P*UP*G)-3') | Authors: | Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C. | Deposit date: | 2022-05-04 | Release date: | 2023-02-08 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (3.51 Å) | Cite: | Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions. Nat Commun, 14, 2023
|
|
6Z5Y
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6z5y by Molmil](/molmil-images/mine/6z5y) | |
8GPB
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8gpb by Molmil](/molmil-images/mine/8gpb) | |
6I0Y
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6i0y by Molmil](/molmil-images/mine/6i0y) | TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel | Descriptor: | 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ... | Authors: | Su, T, Kudva, R, von Heijne, G, Beckmann, R. | Deposit date: | 2018-10-26 | Release date: | 2018-12-05 | Last modified: | 2019-01-23 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Folding pathway of an Ig domain is conserved on and off the ribosome. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
|
|
8B5Q
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8b5q by Molmil](/molmil-images/mine/8b5q) | |
8B5S
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8b5s by Molmil](/molmil-images/mine/8b5s) | Crystal Structure of P. aeruginosa WaaG in complex with UDP-glucose | Descriptor: | UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-DIPHOSPHATE, URIDINE-5'-DIPHOSPHATE-GLUCOSE | Authors: | Scaletti, E, Gustafsson Westergren, R, Stenmark, P. | Deposit date: | 2022-09-24 | Release date: | 2023-10-04 | Last modified: | 2024-04-17 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis. J.Biol.Chem., 299, 2023
|
|
8B62
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8b62 by Molmil](/molmil-images/mine/8b62) | Crystal Structure of P. aeruginosa WaaG in complex with UDP-galactose | Descriptor: | GALACTOSE-URIDINE-5'-DIPHOSPHATE, GLYCEROL, UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG | Authors: | Scaletti, E, Gustafsson Westergren, R, Stenmark, P. | Deposit date: | 2022-09-25 | Release date: | 2023-10-04 | Last modified: | 2024-04-17 | Method: | X-RAY DIFFRACTION (2.02 Å) | Cite: | Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis. J.Biol.Chem., 299, 2023
|
|
8B63
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8b63 by Molmil](/molmil-images/mine/8b63) | Crystal Structure of P. aeruginosa WaaG in complex with UDP-GalNAc | Descriptor: | ACETATE ION, UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-DIPHOSPHATE, ... | Authors: | Scaletti, E, Gustafsson Westergren, R, Stenmark, P. | Deposit date: | 2022-09-25 | Release date: | 2023-10-04 | Last modified: | 2024-04-17 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis. J.Biol.Chem., 299, 2023
|
|
6GPB
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6gpb by Molmil](/molmil-images/mine/6gpb) | |