Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4C16
DownloadVisualize
BU of 4c16 by Molmil
E-selectin lectin, EGF-like and two SCR domains complexed with glycomimetic antagonist
Descriptor: (1R,2R,3S)-3-methylcyclohexane-1,2-diol, (S)-CYCLOHEXYL LACTIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Preston, R.C, Jakob, R.P, Binder, F.P.C, Sager, C.P, Ernst, B, Maier, T.
Deposit date:2013-08-09
Release date:2014-08-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:E-Selectin Ligand Complexes Adopt an Extended High-Affinity Conformation.
J.Mol.Cell.Biol., 8, 2016
4C00
DownloadVisualize
BU of 4c00 by Molmil
Crystal structure of TamA from E. coli
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, ACETATE ION, CHLORIDE ION, ...
Authors:Gruss, F, Zaehringer, F, Jakob, R.P, Burmann, B.M, Hiller, S, Maier, T.
Deposit date:2013-07-30
Release date:2013-09-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Structural Basis of Autotransporter Translocation by Tama
Nat.Struct.Mol.Biol., 20, 2013
4CSS
DownloadVisualize
BU of 4css by Molmil
Crystal structure of FimH in complex with a sulfonamide biphenyl alpha D-mannoside
Descriptor: 4'-(alpha-D-Mannopyranosyloxy)-biphenyl-4-methyl sulfonamide, GLYCEROL, PROTEIN FIMH
Authors:Kleeb, S, Pang, L, Mayer, K, Sigl, A, Eris, D, Preston, R.C, Zihlmann, P, Abgottspon, D, Hutter, A, Scharenberg, M, Jian, X, Navarra, G, Rabbani, S, Smiesko, M, Luedin, N, Jakob, R.P, Schwardt, O, Maier, T, Sharpe, T, Ernst, B.
Deposit date:2014-03-10
Release date:2015-02-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.069 Å)
Cite:Fimh Antagonists: Bioisosteres to Improve the in Vitro and in Vivo Pk/Pd Profile.
J.Med.Chem., 58, 2015
4CW4
DownloadVisualize
BU of 4cw4 by Molmil
Crystal structure of the noncanonical ketosynthase FabY from P. aeruginosa
Descriptor: BETA-KETOACYL SYNTHASE, CHLORIDE ION, SULFATE ION
Authors:Bukhari, H.S.T, Jakob, R.P, Maier, T.
Deposit date:2014-04-01
Release date:2014-12-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.349 Å)
Cite:Evolutionary Origins of the Multienzyme Architecture of Giant Fungal Fatty Acid Synthase.
Structure, 22, 2014
4CSY
DownloadVisualize
BU of 4csy by Molmil
E-selectin lectin, EGF-like and two SCR domains complexed with Sialyl Lewis X
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, E-SELECTIN, ...
Authors:Preston, R.C, Jakob, R.P, Binder, F.P.C, Sager, C.P, Ernst, B, Maier, T.
Deposit date:2014-03-11
Release date:2014-09-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:E-Selectin Ligand Complexes Adopt an Extended High-Affinity Conformation.
J.Mol.Cell.Biol., 8, 2016
2KGJ
DownloadVisualize
BU of 2kgj by Molmil
Solution structure of parvulin domain of PpiD from E.Coli
Descriptor: Peptidyl-prolyl cis-trans isomerase D
Authors:Weininger, U, Jakob, R.P.
Deposit date:2009-03-12
Release date:2010-01-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The prolyl isomerase domain of PpiD from Escherichia coli shows a parvulin fold but is devoid of catalytic activity.
Protein Sci., 19, 2009
6FIJ
DownloadVisualize
BU of 6fij by Molmil
Structure of the loading/condensing region (SAT-KS-MAT) of the cercosporin fungal non-reducing polyketide synthase (NR-PKS) CTB1
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, ...
Authors:Herbst, D.A, Jakob, R.P, Townsend, C.A, Maier, T.
Deposit date:2018-01-18
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:The structural organization of substrate loading in iterative polyketide synthases.
Nat. Chem. Biol., 14, 2018
6FIK
DownloadVisualize
BU of 6fik by Molmil
ACP2 crosslinked to the KS of the loading/condensing region of the CTB1 PKS
Descriptor: Polyketide synthase
Authors:Herbst, D.A, Huitt-Roehl, C.R, Jakob, R.P, Townsend, C.A, Maier, T.
Deposit date:2018-01-18
Release date:2018-03-21
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:The structural organization of substrate loading in iterative polyketide synthases.
Nat. Chem. Biol., 14, 2018
6FN6
DownloadVisualize
BU of 6fn6 by Molmil
Modifying region (DH-ER-KR) of an insect fatty acid synthase (FAS)
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, Fatty acid synthase 1, ...
Authors:Benning, F.M.C, Bukhari, H.S.T, Jakob, R.P, Maier, T.
Deposit date:2018-02-02
Release date:2019-03-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Modifying region (DH-ER-KR) of an insect fatty acid synthase (FAS)
To Be Published
4Z42
DownloadVisualize
BU of 4z42 by Molmil
Crystal structure of urease from Yersinia enterocolitica
Descriptor: NICKEL (II) ION, Urease subunit alpha, Urease subunit beta, ...
Authors:Studer, G, Jakob, R.P, Mahi, M.A, Wiesand, U, Schwede, T, Maier, T.
Deposit date:2015-04-01
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Crystal structure of urease from Yersinia enterocolitica
To Be Published
4Z37
DownloadVisualize
BU of 4z37 by Molmil
Structure of the ketosynthase of module 2 of C0ZGQ5 (trans-AT PKS) from Brevibacillus brevis
Descriptor: Putative mixed polyketide synthase/non-ribosomal peptide synthetase
Authors:Martin, S.F, Jakob, R.P, Herbst, D.A, Maier, T.
Deposit date:2015-03-31
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:The structural organization of trans-AT polyketide synthases: ketoacyl synthase and trans-acting enoyl reductase
To Be Published
6HP2
DownloadVisualize
BU of 6hp2 by Molmil
Crystal Structure of the O-Methyltransferase from the trans-AT PKS multienzyme C0ZGQ3 of Brevibacillus brevis in complex with S-Adenosyl-L-homocysteine
Descriptor: Putative polyketide synthase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Jakob, R.P, Felber, P, Demyanenko, Y, Delbart, F, Maier, T.
Deposit date:2018-09-19
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Functional Analysis of an O-Methyltransferase from the trans-AT PKS biosynthesis pathway
To Be Published
6YL3
DownloadVisualize
BU of 6yl3 by Molmil
High resolution cryo-EM structure of urease from the pathogen Yersinia enterocolitica
Descriptor: NICKEL (II) ION, Urease subunit alpha, Urease subunit beta, ...
Authors:Righetto, R.D, Anton, L, Adaixo, R, Jakob, R, Zivanov, J, Mahi, M.A, Ringler, P, Schwede, T, Maier, T, Stahlberg, H.
Deposit date:2020-04-06
Release date:2020-05-06
Last modified:2020-10-21
Method:ELECTRON MICROSCOPY (1.98 Å)
Cite:High-resolution cryo-EM structure of urease from the pathogen Yersinia enterocolitica.
Nat Commun, 11, 2020
7T3H
DownloadVisualize
BU of 7t3h by Molmil
MicroED structure of Dynobactin
Descriptor: TRP-ASN-SER-ASN-VAL-HIS-SER-TYR-ARG-PHE
Authors:Yoo, B.-K, Kaiser, J.T, Rees, D.C, Miller, R.D, Iinishi, A, Lewis, K, Bowman, S.
Deposit date:2021-12-07
Release date:2022-10-19
Method:ELECTRON CRYSTALLOGRAPHY (1.05 Å)
Cite:Computational identification of a systemic antibiotic for gram-negative bacteria.
Nat Microbiol, 7, 2022
8RQH
DownloadVisualize
BU of 8rqh by Molmil
Crystal Structure of the flavoprotein monooxygenase TrlE from Streptomyces cyaneofuscatus Soc7
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Sowa, S.T, Hoeing, L.S, Jakob, R.P, Maier, T, Teufel, R.
Deposit date:2024-01-18
Release date:2024-05-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Biosynthesis of the bacterial antibiotic 3,7-dihydroxytropolone through enzymatic salvaging of catabolic shunt products.
Chem Sci, 15, 2024
5BP3
DownloadVisualize
BU of 5bp3 by Molmil
Dehydratase domain (DH) of a mycocerosic acid synthase-like (MAS-like) PKS, crystal form 2
Descriptor: 1,2-ETHANEDIOL, Mycocerosic acid synthase-like polyketide synthase
Authors:Herbst, D.A, Jakob, P.R, Zaehringer, F, Maier, T.
Deposit date:2015-05-27
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Mycocerosic acid synthase exemplifies the architecture of reducing polyketide synthases.
Nature, 531, 2016
8B7S
DownloadVisualize
BU of 8b7s by Molmil
Crystal structure of the Chloramphenicol-inactivating oxidoreductase from Novosphingobium sp
Descriptor: Chloramphenicol-inactivating oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Zhang, L, Toplak, M, Saleem-Batcha, R, Hoeing, L, Jakob, R.P, Jehmlich, N, von Bergen, M, Maier, T, Teufel, R.
Deposit date:2022-10-03
Release date:2022-11-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bacterial Dehydrogenases Facilitate Oxidative Inactivation and Bioremediation of Chloramphenicol.
Chembiochem, 24, 2023
4CST
DownloadVisualize
BU of 4cst by Molmil
Crystal structure of FimH in complex with 3'-Chloro-4'-(alpha-D-mannopyranosyloxy)-biphenyl-4-carbonitrile
Descriptor: 3'-chloro-4'-(alpha-D-mannopyranosyloxy)biphenyl-4-carbonitrile, PROTEIN FIMH
Authors:Kleeb, S, Pang, L, Mayer, K, Sigl, A, Eris, D, Preston, R.C, Zihlmann, P, Abgottspon, D, Hutter, A, Scharenberg, M, Jian, X, Navarra, G, Rabbani, S, Smiesko, M, Luedin, N, Jakob, R.P, Schwardt, O, Maier, T, Sharpe, T, Ernst, B.
Deposit date:2014-03-10
Release date:2015-02-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Fimh Antagonists: Bioisosteres to Improve the in Vitro and in Vivo Pk/Pd Profile.
J.Med.Chem., 58, 2015
5BP2
DownloadVisualize
BU of 5bp2 by Molmil
Dehydratase domain (DH) of a mycocerosic acid synthase-like (MAS-like) PKS, crystal form 1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Herbst, D.A, Jakob, P.R, Zaehringer, F, Maier, T.
Deposit date:2015-05-27
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mycocerosic acid synthase exemplifies the architecture of reducing polyketide synthases.
Nature, 531, 2016
5BP4
DownloadVisualize
BU of 5bp4 by Molmil
Modifying region (DH-ER-KR) of a mycocerosic acid synthase-like (MAS-like) PKS
Descriptor: Mycocerosic acid synthase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Herbst, D.A, Jakob, P.R, Zaehringer, F, Maier, T.
Deposit date:2015-05-27
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Mycocerosic acid synthase exemplifies the architecture of reducing polyketide synthases.
Nature, 531, 2016
7Q3N
DownloadVisualize
BU of 7q3n by Molmil
Cryo-EM of the complex between human uromodulin (UMOD)/Tamm-Horsfall protein (THP) and the FimH lectin domain from uropathogenic E. coli
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Type 1 fimbiral adhesin FimH, ...
Authors:Jovine, L, Xu, C, Stsiapanava, A, Carroni, M, Tunyasuvunakool, K, Jumper, J, Wu, B.
Deposit date:2021-10-28
Release date:2022-03-16
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Structure of the decoy module of human glycoprotein 2 and uromodulin and its interaction with bacterial adhesin FimH.
Nat.Struct.Mol.Biol., 29, 2022
2H90
DownloadVisualize
BU of 2h90 by Molmil
Xenobiotic reductase A in complex with coumarin
Descriptor: (R,R)-2,3-BUTANEDIOL, COUMARIN, FLAVIN MONONUCLEOTIDE, ...
Authors:Dobbek, H.
Deposit date:2006-06-08
Release date:2006-08-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Xenobiotic reductase A in the degradation of quinoline by Pseudomonas putida 86: physiological function, structure and mechanism of 8-hydroxycoumarin reduction.
J.Mol.Biol., 361, 2006
2H8Z
DownloadVisualize
BU of 2h8z by Molmil
Xenobiotic Reductase A in complex with 8-Hydroxycoumarin
Descriptor: 8-HYDROXYCOUMARIN, FLAVIN MONONUCLEOTIDE, SULFATE ION, ...
Authors:Dobbek, H.
Deposit date:2006-06-08
Release date:2006-08-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Xenobiotic reductase A in the degradation of quinoline by Pseudomonas putida 86: physiological function, structure and mechanism of 8-hydroxycoumarin reduction.
J.Mol.Biol., 361, 2006
2H8X
DownloadVisualize
BU of 2h8x by Molmil
Xenobiotic Reductase A-oxidized
Descriptor: FLAVIN MONONUCLEOTIDE, SULFATE ION, Xenobiotic reductase A
Authors:Dobbek, H.
Deposit date:2006-06-08
Release date:2006-08-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Xenobiotic reductase A in the degradation of quinoline by Pseudomonas putida 86: physiological function, structure and mechanism of 8-hydroxycoumarin reduction.
J.Mol.Biol., 361, 2006

221051

건을2024-06-12부터공개중

PDB statisticsPDBj update infoContact PDBjnumon