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3U2S
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BU of 3u2s by Molmil
Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain ZM109
Descriptor: (R,R)-2,3-BUTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
Authors:McLellan, J.S, Pancera, M, Kwong, P.D.
Deposit date:2011-10-04
Release date:2011-11-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Nature, 480, 2011
2QMQ
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BU of 2qmq by Molmil
Crystal structure of a n-myc downstream regulated 2 protein (ndrg2, syld, ndr2, ai182517, au040374) from mus musculus at 1.70 A resolution
Descriptor: BENZOIC ACID, MAGNESIUM ION, NONAETHYLENE GLYCOL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-07-16
Release date:2007-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the human N-Myc downstream-regulated gene 2 protein provides insight into its role as a tumor suppressor.
J.Biol.Chem., 286, 2011
2QAD
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BU of 2qad by Molmil
Structure of tyrosine-sulfated 412d antibody complexed with HIV-1 YU2 gp120 and CD4
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Huang, C.-C, Tang, M, Robinson, J, Wyatt, R, Kwong, P.D.
Deposit date:2007-06-14
Release date:2007-09-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of the CCR5 N terminus and of a tyrosine-sulfated antibody with HIV-1 gp120 and CD4
Science, 317, 2007
2QTP
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BU of 2qtp by Molmil
Crystal structure of a duf1185 family protein (spo0826) from silicibacter pomeroyi dss-3 at 2.10 A resolution
Descriptor: Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-08-02
Release date:2007-08-21
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
2QTD
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BU of 2qtd by Molmil
Crystal structure of a putative dinitrogenase (mj0327) from methanocaldococcus jannaschii dsm at 1.70 A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TETRAETHYLENE GLYCOL, Uncharacterized protein MJ0327
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-08-01
Release date:2007-08-21
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:NMR structure of the protein NP_247299.1: comparison with the crystal structure.
Acta Crystallogr.,Sect.F, 66, 2010
3U46
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BU of 3u46 by Molmil
CH04H/CH02L P212121
Descriptor: CH02 Light chain Fab, CH04 Heavy chain Fab
Authors:Louder, R, Pancera, M, McLellan, J.S, Kwong, P.D.
Deposit date:2011-10-07
Release date:2011-11-30
Last modified:2011-12-21
Method:X-RAY DIFFRACTION (2.906 Å)
Cite:Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Nature, 480, 2011
2RA9
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BU of 2ra9 by Molmil
Crystal structure of a duf1285 family protein (sbal_2486) from shewanella baltica os155 at 1.40 A resolution
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, Uncharacterized protein DUF1285
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-09-14
Release date:2007-10-16
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structures of the first representatives of Pfam family PF06938 (DUF1285) reveal a new fold with repeated structural motifs and possible involvement in signal transduction.
Acta Crystallogr.,Sect.F, 66, 2010
6U02
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BU of 6u02 by Molmil
CryoEM-derived model of NA-63 Fab in complex with N9 Shanghai2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab-63 Heavy Chain, Fab-63 Light Chain, ...
Authors:Ward, A.B, Turner, H.L, Zhu, X.
Deposit date:2019-08-13
Release date:2019-12-04
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural Basis of Protection against H7N9 Influenza Virus by Human Anti-N9 Neuraminidase Antibodies.
Cell Host Microbe, 26, 2019
1WCJ
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BU of 1wcj by Molmil
Conserved Hypothetical Protein TM0487 from Thermotoga maritima
Descriptor: HYPOTHETICAL PROTEIN TM0487
Authors:Almeida, M.S, Peti, W, Herrmann, T, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2004-11-17
Release date:2004-12-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of the Conserved Hypothetical Protein Tm0487 from Thermotoga Maritima: Implications for 216 Homologous Duf59 Proteins.
Protein Sci., 14, 2005
6U59
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BU of 6u59 by Molmil
HIV-1 B41 SOSIP.664 in complex with rabbit antibody 13B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SOSIP.664 gp120,SOSIP.664 gp120, ...
Authors:Yang, Y.R, Ward, A.B.
Deposit date:2019-08-27
Release date:2020-01-29
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Autologous Antibody Responses to an HIV Envelope Glycan Hole Are Not Easily Broadened in Rabbits.
J.Virol., 94, 2020
7KSG
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BU of 7ksg by Molmil
SARS-CoV-2 spike in complex with nanobodies E
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody against SARS-CoV-2 glycoprotein, Spike glycoprotein
Authors:Hallberg, B.M, Das, H.
Deposit date:2020-11-22
Release date:2021-01-20
Last modified:2021-06-30
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape.
Science, 371, 2021
6UUD
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BU of 6uud by Molmil
Crystal structure of antibody 5D5 in complex with PfCSP N-terminal peptide
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 5D5 Antibody Fab, ...
Authors:Thai, E, Scally, S.W, Julien, J.P.
Deposit date:2019-10-30
Release date:2020-07-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A high-affinity antibody against the CSP N-terminal domain lacks Plasmodium falciparum inhibitory activity.
J.Exp.Med., 217, 2020
1VR3
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BU of 1vr3 by Molmil
Crystal structure of Acireductone dioxygenase (13543033) from Mus musculus at 2.06 A resolution
Descriptor: Acireductone dioxygenase, ISOPROPYL ALCOHOL, NICKEL (II) ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-01-28
Release date:2005-02-15
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal structure of acireductone dioxygenase (ARD) from Mus musculus at 2.06 angstrom resolution.
Proteins, 64, 2006
1VRM
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BU of 1vrm by Molmil
Crystal structure of the apbe protein (tm1553) from thermotoga maritima msb8 at 1.58 A resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, UNKNOWN LIGAND, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-03-10
Release date:2005-03-22
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of the ApbE protein (TM1553) from Thermotoga maritima at 1.58 A resolution.
Proteins, 64, 2006
6VPX
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BU of 6vpx by Molmil
Nanodisc of full-length HIV-1 Envelope glycoprotein clone AMC011 in complex with one PGT151 Fab and three 10E8 Fabs
Descriptor: (2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rantalainen, K, Ward, A.B.W.
Deposit date:2020-02-04
Release date:2020-04-22
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (5 Å)
Cite:HIV-1 Envelope and MPER Antibody Structures in Lipid Assemblies.
Cell Rep, 31, 2020
6W4Y
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BU of 6w4y by Molmil
Structure of full-length human lambda-6A light chain JTO in complex with hydantoin stabilizer
Descriptor: 2-[(4~{R})-4-(2-methylpropyl)-2,5-bis(oxidanylidene)imidazolidin-1-yl]-~{N}-[4-(trifluoromethyl)phenyl]ethanamide, GLYCEROL, JTO light chain, ...
Authors:Yan, N.L, Morgan, G.J, Kelly, J.W.
Deposit date:2020-03-11
Release date:2020-07-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural basis for the stabilization of amyloidogenic immunoglobulin light chains by hydantoins.
Bioorg.Med.Chem.Lett., 30, 2020
1ZCZ
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BU of 1zcz by Molmil
Crystal structure of Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase (TM1249) from THERMOTOGA MARITIMA at 1.88 A resolution
Descriptor: Bifunctional purine biosynthesis protein purH, POTASSIUM ION, TETRAETHYLENE GLYCOL
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-04-13
Release date:2005-04-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of AICAR transformylase IMP cyclohydrolase (TM1249) from Thermotoga maritima at 1.88 A resolution.
Proteins, 71, 2008
1ZX8
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BU of 1zx8 by Molmil
CRYSTAL STRUCTURE OF an atypical cyclophilin (peptidylprolyl cis-trans isomerase) (TM1367) FROM THERMOTOGA MARITIMA AT 1.90 A RESOLUTION
Descriptor: NICKEL (II) ION, PENTAETHYLENE GLYCOL, hypothetical protein TM1367
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-06-07
Release date:2005-07-26
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of TM1367 from Thermotoga maritima at 1.90 A resolution reveals an atypical member of the cyclophilin (peptidylprolyl isomerase) fold.
Proteins, 63, 2006
1Z9F
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BU of 1z9f by Molmil
Crystal structure of single stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60 A resolution
Descriptor: Single-strand binding protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-04-01
Release date:2005-04-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a single-stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60 A resolution.
Proteins, 63, 2006
1ZKG
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BU of 1zkg by Molmil
Crystal structure of Transcriptional regulator, TETR family (tm1030) from Thermotoga maritima at 2.30 A resolution
Descriptor: UNKNOWN LIGAND, transcriptional regulator, TetR family
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-05-02
Release date:2005-07-26
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of TM1030 from Thermotoga maritima at 2.3 A resolution reveals molecular details of its transcription repressor function.
Proteins, 68, 2007
2A6A
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BU of 2a6a by Molmil
Crystal structure of Glycoprotein endopeptidase (tm0874) from THERMOTOGA MARITIMA at 2.50 A resolution
Descriptor: UNKNOWN LIGAND, hypothetical protein TM0874
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-07-02
Release date:2005-07-19
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of an essential bacterial protein YeaZ (TM0874) from Thermotoga maritima at 2.5 A resolution.
Acta Crystallogr.,Sect.F, 66, 2010
2AFB
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BU of 2afb by Molmil
Crystal structure of 2-dehydro-3- deoxygluconokinase (EC 2.7.1.45) (tm0067) from THERMOTOGA MARITIMA at 2.05 A resolution
Descriptor: 2-keto-3-deoxygluconate kinase, CALCIUM ION, NICKEL (II) ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-07-25
Release date:2006-02-14
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of 2-keto-3-deoxygluconate kinase (TM0067) from Thermotoga maritima at 2.05 A resolution.
Proteins, 70, 2007
2IAY
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BU of 2iay by Molmil
Crystal structure of a duf1831 family protein (lp2179) from lactobacillus plantarum at 1.20 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, Hypothetical protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-09-08
Release date:2006-10-10
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of LP2179, the first representative of Pfam family PF08866, suggests a new fold with a role in amino-acid metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
2ICH
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BU of 2ich by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE ATTH (NE1406) FROM NITROSOMONAS EUROPAEA AT 2.00 A RESOLUTION
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, Putative AttH, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-09-12
Release date:2006-10-03
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the first representative of Pfam family PF09410 (DUF2006) reveals a structural signature of the calycin superfamily that suggests a role in lipid metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
2IIZ
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BU of 2iiz by Molmil
Crystal structure of putative melanin biosynthesis protein TyrA with bound heme (NP_716371.1) from Shewanella Oneidensis at 2.30 A resolution
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, Melanin biosynthesis protein TyrA, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-09-28
Release date:2006-11-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification and structural characterization of heme binding in a novel dye-decolorizing peroxidase, TyrA.
Proteins, 69, 2007

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