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2MTF
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BU of 2mtf by Molmil
Solution structure of the La motif of human LARP6
Descriptor: La-related protein 6
Authors:Martino, L, Salisbury, N.JH, Atkinson, A.R, Kelly, G, Conte, M.R.
Deposit date:2014-08-18
Release date:2014-12-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Synergic interplay of the La motif, RRM1 and the interdomain linker of LARP6 in the recognition of collagen mRNA expands the RNA binding repertoire of the La module.
Nucleic Acids Res., 43, 2015
5EB3
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BU of 5eb3 by Molmil
VB6-bound protein
Descriptor: 4,5-bis(hydroxymethyl)-2-methyl-pyridin-3-ol, SULFATE ION, YfiR
Authors:Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
Deposit date:2015-10-17
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
5EBB
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BU of 5ebb by Molmil
Structure of human sphingomyelinase phosphodiesterase like 3A (SMPDL3A) with Zn2+
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acid sphingomyelinase-like phosphodiesterase 3a, GLYCEROL, ...
Authors:Lim, S.M, Yeung, K, Tresaugues, L, Teo, H.L, Nordlund, P.
Deposit date:2015-10-19
Release date:2016-01-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure and catalytic mechanism of human sphingomyelin phosphodiesterase like 3a - an acid sphingomyelinase homologue with a novel nucleotide hydrolase activity.
Febs J., 283, 2016
8Q1Q
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BU of 8q1q by Molmil
mouse Keap1 in complex with stapled peptide
Descriptor: Kelch-like ECH-associated protein 1, SULFATE ION, Stapled peptide, ...
Authors:Kack, H, Wissler, L.
Deposit date:2023-08-01
Release date:2023-10-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.378 Å)
Cite:A cell-active cyclic peptide targeting the Nrf2/Keap1 protein-protein interaction.
Chem Sci, 14, 2023
6D02
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BU of 6d02 by Molmil
Cross-alpha Amyloid-like Structure alphaAmL, 2nd form
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CARBONATE ION, PHOSPHATE ION, ...
Authors:Zhang, S.-Q, Liu, L, Degrado, W.F.
Deposit date:2018-04-10
Release date:2019-02-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Designed peptides that assemble into cross-alpha amyloid-like structures.
Nat. Chem. Biol., 14, 2018
5DWV
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BU of 5dwv by Molmil
Crystal structure of the Luciferase complexed with substrate analogue
Descriptor: 2-[6-(cyclobuta-1,3-dien-1-ylamino)-1,3-benzothiazol-2-yl]-1,3-thiazol-4-ol, Luciferin 4-monooxygenase
Authors:Su, J, Li, Z, Yuan, Z, Gu, L.
Deposit date:2015-09-23
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the Luciferase complexed with substrate analogue
To Be Published
5DP6
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BU of 5dp6 by Molmil
Crystal Structure of EV71 3C Proteinase in complex with compound 7
Descriptor: 3C proteinase, ethyl (2Z,4S)-4-{[N-(3-cyclopropylpropanoyl)-L-phenylalanyl]amino}-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate
Authors:Wu, C, Zhang, L, Li, P, Cai, Q, Peng, X, Li, N, Cai, Y, Li, J, Lin, T.
Deposit date:2015-09-12
Release date:2016-03-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Fragment-wise design of inhibitors to 3C proteinase from enterovirus 71
Biochim.Biophys.Acta, 1860, 2016
6CR2
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BU of 6cr2 by Molmil
Crystal structure of sterol 14-alpha demethylase (CYP51B) from Aspergillus fumigatus in complex with the VNI derivative N-(1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-(2-fluoro-4-(2,2,2-trifluoroethoxy)phenyl)-1,3,4-oxadiazol-2-yl)benzamide
Descriptor: 14-alpha sterol demethylase Cyp51B, N-[(1R)-1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl]-4-{5-[2-fluoro-4-(2,2,2-trifluoroethoxy)phenyl]-1,3,4-oxadiazol-2-yl}benzamide, PROTOPORPHYRIN IX CONTAINING FE
Authors:Friggeri, L, Hargrove, T.Y, Wawrzak, Z, Lepesheva, G.I.
Deposit date:2018-03-16
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Sterol 14 alpha-Demethylase Structure-Based Design of VNI (( R)- N-(1-(2,4-Dichlorophenyl)-2-(1 H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide)) Derivatives To Target Fungal Infections: Synthesis, Biological Evaluation, and Crystallographic Analysis.
J. Med. Chem., 61, 2018
8Q1R
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BU of 8q1r by Molmil
mouse Keap1 in complex with stapled peptide
Descriptor: Kelch-like ECH-associated protein 1, SODIUM ION, SULFATE ION, ...
Authors:Kack, H, Wissler, L.
Deposit date:2023-08-01
Release date:2023-10-25
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:A cell-active cyclic peptide targeting the Nrf2/Keap1 protein-protein interaction.
Chem Sci, 14, 2023
5DY2
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BU of 5dy2 by Molmil
Crystal structure of Dbr2 with mutation M27L
Descriptor: 1,6-DIHYDROXY NAPHTHALENE, Artemisinic aldehyde Delta(11(13)) reductase, FLAVIN MONONUCLEOTIDE
Authors:Li, L, Chen, T.T, Xu, Y.C.
Deposit date:2015-09-24
Release date:2016-10-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:The Crystal structure of Dbr2
to be published
1RFY
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BU of 1rfy by Molmil
Crystal Structure of Quorum-Sensing Antiactivator TraM
Descriptor: Transcriptional repressor traM
Authors:Chen, G, Malenkos, J.W, Cha, M.R, Fuqua, C, Chen, L.
Deposit date:2003-11-10
Release date:2004-11-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Quorum-sensing antiactivator TraM forms a dimer that dissociates to inhibit TraR
Mol.Microbiol., 52, 2004
8PBY
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BU of 8pby by Molmil
Single particle cryo-EM of the P140-P110 heterodimer with an alternative conformation in the P140 stalk of Mycoplasma genitalium at a resolution of 3.7 Angstrom.
Descriptor: Adhesin P1, Mgp-operon protein 3
Authors:Sprankel, L, Scheffer, M.P, Frangakis, A.S.
Deposit date:2023-06-09
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-electron tomography reveals the binding and release states of the major adhesion complex from Mycoplasma genitalium.
Plos Pathog., 19, 2023
8PC1
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BU of 8pc1 by Molmil
Sub-tomogram average of the closed conformation of the Nap adhesion complex from the human pathogen Mycoplasma genitalium.
Descriptor: Adhesin P1, Mgp-operon protein 3
Authors:Sprankel, L, Scheffer, M.P, Frangakis, A.S.
Deposit date:2023-06-09
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (18 Å)
Cite:Cryo-electron tomography reveals the binding and release states of the major adhesion complex from Mycoplasma genitalium.
Plos Pathog., 19, 2023
1VJK
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BU of 1vjk by Molmil
Putative molybdopterin converting factor, subunit 1 from Pyrococcus furiosus, Pfu-562899-001
Descriptor: molybdopterin converting factor, subunit 1
Authors:Chen, L, Liu, Z.J, Tempel, W, Shah, A, Lee, D, Rose, J.P, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Lee, H.S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Adams, M.W.W, Richardson, D.C, Richardson, J.S, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-03-10
Release date:2004-08-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Putative molybdopterin converting factor, subunit 1 from Pyrococcus furiosus, Pfu-562899-001 '
To be published
1S1J
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BU of 1s1j by Molmil
Crystal Structure of ZipA in complex with indoloquinolizin inhibitor 1
Descriptor: (12bS)-1,2,3,4,12,12b-hexahydroindolo[2,3-a]quinolizin-7(6H)-one, Cell division protein zipA
Authors:Jenning, L.D, Foreman, K.W, Rush III, T.S, Tsao, D.H, Mosyak, L, Li, Y, Sukhdeo, M.N, Ding, W, Dushin, E.G, Kenney, C.H, Moghazeh, S.L, Peterson, P.J, Ruzin, A.V, Tuckman, M, Sutherland, A.G.
Deposit date:2004-01-06
Release date:2004-05-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Design and synthesis of indolo[2,3-a]quinolizin-7-one inhibitors of the ZipA-FtsZ interaction
Bioorg.Med.Chem.Lett., 14, 2004
8PBZ
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BU of 8pbz by Molmil
Sub-tomogram average of the Nap adhesion complex from the human pathogen Mycoplasma genitalium at 11 Angstrom.
Descriptor: Adhesin P1, Mgp-operon protein 3, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Sprankel, L, Scheffer, M.P, Frangakis, A.F.
Deposit date:2023-06-09
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Cryo-electron tomography reveals the binding and release states of the major adhesion complex from Mycoplasma genitalium.
Plos Pathog., 19, 2023
8PBX
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BU of 8pbx by Molmil
Single particle cryo-EM of the P140-P110 heterodimer of Mycoplasma genitalium at 3.3 Angstrom resolution.
Descriptor: Adhesin P1, Mgp-operon protein 3
Authors:Sprankel, L, Scheffer, M.P, Frangakis, A.S.
Deposit date:2023-06-09
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-electron tomography reveals the binding and release states of the major adhesion complex from Mycoplasma genitalium.
Plos Pathog., 19, 2023
8PC0
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BU of 8pc0 by Molmil
Sub-tomogram average of the open conformation of the Nap adhesion complex from the human pathogen Mycoplasma genitalium.
Descriptor: Adhesin P1, Mgp-operon protein 3, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-1,5-anhydro-D-glucitol, ...
Authors:Sprankel, L, Scheffer, M.P, Frangakis, A.F.
Deposit date:2023-06-09
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Cryo-electron tomography reveals the binding and release states of the major adhesion complex from Mycoplasma genitalium.
Plos Pathog., 19, 2023
1S7H
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BU of 1s7h by Molmil
Structural Genomics, 2.2A crystal structure of protein YKOF from Bacillus subtilis
Descriptor: ykoF
Authors:Zhang, R, Lezondra, L, Moy, S, Dementieva, I, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-01-29
Release date:2004-07-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:2.2A crystal structure of protein YKOF from Bacillus subtilis
To be Published
6CTY
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BU of 6cty by Molmil
Crystal structure of dihydroorotase pyrC from Yersinia pestis in complex with zinc and malate at 2.4 A resolution
Descriptor: D-MALATE, Dihydroorotase, ZINC ION
Authors:Lipowska, J, Shabalin, I.G, Winsor, J, Woinska, M, Cooper, D.R, Kwon, K, Shuvalova, L, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-03-23
Release date:2018-04-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Pyrimidine biosynthesis in pathogens - Structures and analysis of dihydroorotases from Yersinia pestis and Vibrio cholerae.
Int.J.Biol.Macromol., 136, 2019
5DU2
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BU of 5du2 by Molmil
Structural analysis of EspG2 glycosyltransferase
Descriptor: EspG2 glycosyltransferase
Authors:Michalska, K, Elshahawi, S.I, Bigelow, L, Babnigg, G, Thorson, J.S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-09-18
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural analysis of EspG2 glycosyltransferase
To Be Published
8Q2E
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BU of 8q2e by Molmil
The 1.68-A X-ray crystal structure of Sporosarcina pasteurii urease inhibited by thiram and bound to dimethylditiocarbamate
Descriptor: 1,2-ETHANEDIOL, HYDROXIDE ION, NICKEL (II) ION, ...
Authors:Mazzei, L, Cianci, M, Ciurli, S.
Deposit date:2023-08-02
Release date:2023-11-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Kinetic and structural details of urease inactivation by thiuram disulphides.
J.Inorg.Biochem., 250, 2023
6CYN
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BU of 6cyn by Molmil
CTX-M-14 N106S/D240G mutant
Descriptor: Beta-lactamase
Authors:Patel, M.P, Hu, L, Sankaran, B, Brown, C, Prasad, B.V.V, Palzkill, T.
Deposit date:2018-04-06
Release date:2018-10-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Synergistic effects of functionally distinct substitutions in beta-lactamase variants shed light on the evolution of bacterial drug resistance.
J. Biol. Chem., 293, 2018
1S8C
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BU of 1s8c by Molmil
Crystal structure of human heme oxygenase in a complex with biliverdine
Descriptor: BILIVERDINE IX ALPHA, Heme oxygenase 1
Authors:Lad, L, Friedman, J, Li, H, Bhaskar, B, Ortiz de Montellano, P.R, Poulos, T.L.
Deposit date:2004-02-02
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Crystal Structure of Human Heme Oxygenase-1 in a Complex with Biliverdin
Biochemistry, 43, 2004
1S9D
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BU of 1s9d by Molmil
ARF1[DELTA 1-17]-GDP-MG IN COMPLEX WITH BREFELDIN A AND A SEC7 DOMAIN
Descriptor: 1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE, ADP-Ribosylation Factor 1, Arno, ...
Authors:Renault, L, Guibert, B, Cherfils, J.
Deposit date:2004-02-04
Release date:2004-02-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Snapshots of the Mechanism and Inhibition of a Guanine Nucleotide Exchange Factor
Nature, 426, 2003

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