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Crystal structure of tRNA-dependent lantibiotic dehydratase NisB in complex with NisA leader peptide
Descriptor:	Nisin biosynthesis protein NisB
Authors:	Hao, Y, Nair, S.K.
Deposit date:	2014-09-08
Release date:	2014-10-29
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.9 Å)
Cite:	Structure and mechanism of the tRNA-dependent lantibiotic dehydratase NisB. Nature, 517, 2015

6D6A

The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 10
Descriptor:	2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl benzoate, Transcriptional activator protein LasR
Authors:	Dong, S.H, Nair, S.K.
Deposit date:	2018-04-20
Release date:	2018-08-08
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR. Cell Chem Biol, 25, 2018

6E6Y

Dieckmann cyclase, NcmC
Descriptor:	Dieckmann cyclase, NcmC, SULFATE ION
Authors:	Cogan, D.P, Nair, S.K.
Deposit date:	2018-07-25
Release date:	2019-07-31
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation. Acs Chem.Biol., 2020

6EC7

Glutamylation domain, TbtB, from thiomuracin biosynthesis
Descriptor:	Lantibiotic dehydratase domain protein
Authors:	Cogan, D.P, Nair, S.K.
Deposit date:	2018-08-07
Release date:	2019-08-14
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (2.15 Å)
Cite:	Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics. Proc.Natl.Acad.Sci.USA, 116, 2019

3TLB

Microcin C7 self immunity protein MccF in complex aspartyl sulfamoyl adenosine
Descriptor:	5'-O-(L-alpha-aspartylsulfamoyl)adenosine, MccF
Authors:	Agarwal, V, Nair, S.K.
Deposit date:	2011-08-29
Release date:	2012-02-29
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (1.501 Å)
Cite:	Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7. Proc.Natl.Acad.Sci.USA, 109, 2012

3TLA

Microcin C7 self immunity protein MccF in the wild type APO state
Descriptor:	1,2-ETHANEDIOL, MccF
Authors:	Agarwal, V, Nair, S.K.
Deposit date:	2011-08-29
Release date:	2012-02-29
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (1.201 Å)
Cite:	Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7. Proc.Natl.Acad.Sci.USA, 109, 2012

3TLZ

Microcin C7 self immunity protein MccF mutant W186F in complex with Adenosine Monophosphate
Descriptor:	1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, MccF
Authors:	Agarwal, V, Nair, S.K.
Deposit date:	2011-08-30
Release date:	2012-02-29
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7. Proc.Natl.Acad.Sci.USA, 109, 2012

3CHH

Crystal Structure of Di-iron AurF
Descriptor:	MU-OXO-DIIRON, p-Aminobenzoate N-Oxygenase
Authors:	Zhang, H, Brunzelle, J.S, Nair, S.K.
Deposit date:	2008-03-09
Release date:	2008-05-27
Last modified:	2024-02-21
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	In vitro reconstitution and crystal structure of p-aminobenzoate N-oxygenase (AurF) involved in aureothin biosynthesis. Proc.Natl.Acad.Sci.Usa, 105, 2008

6E6T

Dieckmann cyclase, NcmC, bound to cerulenin
Descriptor:	(4S,5R)-4,5-dihydroxy-5-[(3E,6E)-octa-3,6-dien-1-yl]pyrrolidin-2-one, NcmC, SULFATE ION
Authors:	Cogan, D.P, Nair, S.K.
Deposit date:	2018-07-25
Release date:	2019-07-31
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation. Acs Chem.Biol., 2020

6E6U

Variant C89S of Dieckmann cyclase, NcmC
Descriptor:	Dieckmann cyclase, NcmC, SULFATE ION
Authors:	Cogan, D.P, Nair, S.K.
Deposit date:	2018-07-25
Release date:	2019-07-31
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.55 Å)
Cite:	Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation. Acs Chem.Biol., 2020

6EC8

Glutamylation domain, TbtB, from thiomuracin biosynthesis bound to 5'-phosphodesmethylglutamycin
Descriptor:	3'-deoxy-3'-[(L-alpha-glutamyl)amino]adenosine 5'-(dihydrogen phosphate), Lantibiotic dehydratase domain protein
Authors:	Cogan, D.P, Nair, S.K.
Deposit date:	2018-08-07
Release date:	2019-06-19
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.148 Å)
Cite:	Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics. Proc.Natl.Acad.Sci.USA, 116, 2019

8SAP

Crystal structure of class III lanthipeptide synthetase ThurKC
Descriptor:	Class III lanthionine synthetase LanKC
Authors:	Hernandez Garcia, A, Nair, S.K.
Deposit date:	2023-04-01
Release date:	2023-10-11
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.52 Å)
Cite:	Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase. Acs Cent.Sci., 9, 2023

8SAM

Crystal structure of class III lanthipeptide synthetase LP-GS-ThurKC in complex with ATP
Descriptor:	ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Class III lanthipeptide, ...
Authors:	Hernandez Garcia, A, Nair, S.K.
Deposit date:	2023-04-01
Release date:	2023-10-11
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.15 Å)
Cite:	Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase. Acs Cent.Sci., 9, 2023

8SAO

Crystal structure of class III lanthipeptide synthetase ThurKC in complex with ThurA1 leader peptide
Descriptor:	Class III lanthionine synthetase LanKC, Class III lanthipeptide
Authors:	Hernandez Garcia, A, Nair, S.K.
Deposit date:	2023-04-01
Release date:	2023-11-01
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.502 Å)
Cite:	Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase. Acs Cent.Sci., 9, 2023

8CWX

NMR structure of a Stapled Lanthipeptide Natural Product
Descriptor:	Lanthipeptide Natural Product mSmoAc
Authors:	Pei, Z, Zhu, L, Nair, S.K.
Deposit date:	2022-05-19
Release date:	2022-10-12
Method:	SOLUTION NMR
Cite:	Class V Lanthipeptide Cyclase Directs the Biosynthesis of a Stapled Peptide Natural Product. J.Am.Chem.Soc., 144, 2022

8CZK

Human LanCL1 bound to GSH and Dhb-Erk peptide
Descriptor:	Deb-Erk peptide, GLUTATHIONE, Glutathione S-transferase LANCL1, ...
Authors:	Ongpipattanakul, C, Nair, S.K.
Deposit date:	2022-05-24
Release date:	2023-01-25
Method:	X-RAY DIFFRACTION (1.91 Å)
Cite:	The mechanism of thia-Michael addition catalyzed by LanC enzymes. Proc.Natl.Acad.Sci.USA, 120, 2023

8D0V

Human LanCL1 C264A mutant bound to GSH
Descriptor:	GLUTATHIONE, Glutathione S-transferase LANCL1, ZINC ION
Authors:	Ongpipattanakul, C, Nair, S.K.
Deposit date:	2022-05-26
Release date:	2023-01-25
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.79 Å)
Cite:	The mechanism of thia-Michael addition catalyzed by LanC enzymes. Proc.Natl.Acad.Sci.USA, 120, 2023

8CZL

Human LanCL1 bound to methyl glutathione (MeGSH)
Descriptor:	Glutathione S-transferase LANCL1, L-GAMMA-GLUTAMYL-S-METHYLCYSTEINYLGLYCINE, ZINC ION
Authors:	Ongpipattanakul, C, Nair, S.K.
Deposit date:	2022-05-24
Release date:	2023-01-25
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.58 Å)
Cite:	The mechanism of thia-Michael addition catalyzed by LanC enzymes. Proc.Natl.Acad.Sci.USA, 120, 2023

8D19

Human LanCL1 bound to GSH
Descriptor:	GLUTATHIONE, Glutathione S-transferase LANCL1, ZINC ION
Authors:	Ongpipattanakul, C, Nair, S.K.
Deposit date:	2022-05-26
Release date:	2023-01-25
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.52 Å)
Cite:	The mechanism of thia-Michael addition catalyzed by LanC enzymes. Proc.Natl.Acad.Sci.USA, 120, 2023

4E5P

Thermostable phosphite dehydrogenase A176R variant in complex with NAD
Descriptor:	NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Thermostable phosphite dehydrogenase A176R variant
Authors:	Zou, Y, Zhang, H, Nair, S.K.
Deposit date:	2012-03-14
Release date:	2012-05-30
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry, 51, 2012

4EBF

SeMet thermostable phosphite dehydrogenase Glu175-Ala mutant
Descriptor:	NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Thermostable phosphite dehydrogenase
Authors:	Zou, Y, Zhang, H, Nair, S.K.
Deposit date:	2012-03-23
Release date:	2012-05-30
Last modified:	2012-06-13
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry, 51, 2012

4E5K

Thermostable phosphite dehydrogenase in complex with NAD and sulfite
Descriptor:	NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Phosphite dehydrogenase (thermostable variant), SULFITE ION
Authors:	Zou, Y, Zhang, H, Nair, S.K.
Deposit date:	2012-03-14
Release date:	2012-05-30
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry, 51, 2012

4E5M

Thermostable phosphite dehydrogenase E175A/A176R in complex with NADP
Descriptor:	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Thermostable phosphite dehydrogenase
Authors:	Zou, Y, Zhang, H, Nair, S.K.
Deposit date:	2012-03-14
Release date:	2012-05-30
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:	Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry, 51, 2012

4E5N

Thermostable phosphite dehydrogenase in complex with NAD
Descriptor:	NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Thermostable phosphite dehydrogenase
Authors:	Zou, Y, Zhang, H, Nair, S.K.
Deposit date:	2012-03-14
Release date:	2012-05-30
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry, 51, 2012

6PEU

Structure of YcaO enzyme from Methanocaldococcus jannaschii in complex with peptide
Descriptor:	ADENOSINE-5'-TRIPHOSPHATE, GLY-ARG-LEU-GLY-PHE-TYR-GLY-TYR-ASP-LEU-GLN-ASP, MAGNESIUM ION, ...
Authors:	Dong, S.-H, Nair, S.K.
Deposit date:	2019-06-20
Release date:	2019-11-06
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	Mechanistic Basis for Ribosomal Peptide Backbone Modifications. Acs Cent.Sci., 5, 2019

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