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2D3U
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BU of 2d3u by Molmil
X-ray crystal structure of hepatitis C virus RNA dependent RNA polymerase in complex with non-nucleoside analogue inhibitor
Descriptor: 5-(4-CYANOPHENYL)-3-{[(2-METHYLPHENYL)SULFONYL]AMINO}THIOPHENE-2-CARBOXYLIC ACID, polyprotein
Authors:Biswal, B.K, Wang, M, Cherney, M.M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Bedard, J, James, M.N.G.
Deposit date:2005-10-02
Release date:2006-08-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Non-nucleoside Inhibitors Binding to Hepatitis C Virus NS5B Polymerase Reveal a Novel Mechanism of Inhibition
J.Mol.Biol., 361, 2006
4NPM
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BU of 4npm by Molmil
Crystal structure of Zebrafish ALKBH5 in complex with succinic acid
Descriptor: MANGANESE (II) ION, RNA demethylase ALKBH5, SUCCINIC ACID
Authors:He, C, Chen, W, Zhang, L.
Deposit date:2013-11-21
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Crystal structure of the RNA demethylase ALKBH5 from zebrafish.
Febs Lett., 588, 2014
3TBN
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BU of 3tbn by Molmil
Crystal structure of a miner2 homolog: a type 6 CDGSH iron-sulfur protein.
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Putative uncharacterized protein
Authors:Lin, J, Zhang, L, Ye, K.
Deposit date:2011-08-07
Release date:2011-10-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structure and Molecular Evolution of CDGSH Iron-Sulfur Domains.
Plos One, 6, 2011
4NPL
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BU of 4npl by Molmil
Crystal structure of Zebrafish ALKBH5 in complex with alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, MANGANESE (II) ION, RNA demethylase ALKBH5
Authors:He, C, Chen, W, Zhang, L.
Deposit date:2013-11-21
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Crystal structure of the RNA demethylase ALKBH5 from zebrafish.
Febs Lett., 588, 2014
3TBO
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BU of 3tbo by Molmil
Crystal structure of a type 3 CDGSH iron-sulfur protein.
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Zinc finger, CDGSH-type domain protein
Authors:Lin, J, Zhang, L, Ye, K.
Deposit date:2011-08-07
Release date:2011-10-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and Molecular Evolution of CDGSH Iron-Sulfur Domains.
Plos One, 6, 2011
3TBM
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BU of 3tbm by Molmil
Crystal structure of a type 4 CDGSH iron-sulfur protein.
Descriptor: FE2/S2 (INORGANIC) CLUSTER, L(+)-TARTARIC ACID, NONAETHYLENE GLYCOL, ...
Authors:Lin, J, Zhang, L, Ye, K.
Deposit date:2011-08-07
Release date:2011-10-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Structure and Molecular Evolution of CDGSH Iron-Sulfur Domains.
Plos One, 6, 2011
7KCB
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BU of 7kcb by Molmil
Symmetry in Yeast Alcohol Dehydrogenase 1 -Closed Form with NAD+ and Trifluoroethanol
Descriptor: ADH1 isoform 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRIFLUOROETHANOL, ...
Authors:Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
Deposit date:2020-10-05
Release date:2021-03-31
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
7KCQ
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BU of 7kcq by Molmil
Symmetry in Yeast Alcohol Dehydrogenase 1 -Open Form of Apoenzyme
Descriptor: Alcohol dehydrogenase, ZINC ION
Authors:Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
Deposit date:2020-10-07
Release date:2021-03-31
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
7KC2
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BU of 7kc2 by Molmil
Symmetry in Yeast Alcohol Dehydrogenase 1 -Closed Form with NADH
Descriptor: Alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
Deposit date:2020-10-04
Release date:2021-03-31
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
1YVX
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BU of 1yvx by Molmil
Hepatitis C Virus RNA Polymerase Genotype 2a In Complex With Non- Nucleoside Analogue Inhibitor
Descriptor: 3-[ISOPROPYL(4-METHYLBENZOYL)AMINO]-5-PHENYLTHIOPHENE-2-CARBOXYLIC ACID, RNA dependent RNA polymerase, SULFATE ION
Authors:Biswal, B.K, Cherney, M.M, Wang, M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Nicolas, O, Bedard, J, James, M.N.G.
Deposit date:2005-02-16
Release date:2005-03-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the RNA dependent RNA polymerase genotype 2a of hepatitis C virus reveal two conformations and suggest mechanisms of inhibition by non-nucleoside inhibitors.
J.Biol.Chem., 280, 2005
7KJY
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BU of 7kjy by Molmil
Symmetry in Yeast Alcohol Dehydrogenase 1 - Open Form with NADH
Descriptor: Alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
Deposit date:2020-10-26
Release date:2021-03-31
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
3V35
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BU of 3v35 by Molmil
Aldose reductase complexed with a nitro compound
Descriptor: 2-[(5-nitro-1,3-thiazol-2-yl)carbamoyl]phenyl acetate, Aldose reductase, DIMETHYLFORMAMIDE, ...
Authors:Zheng, X, Zhang, L, Chen, Y, Luo, H, Hu, X.
Deposit date:2011-12-13
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Partial inhibition of aldose reductase by nitazoxanide and its molecular basis.
Chemmedchem, 7, 2012
3V36
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BU of 3v36 by Molmil
Aldose reductase complexed with glceraldehyde
Descriptor: Aldose reductase, D-Glyceraldehyde, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Zheng, X, Zhang, L, Chen, Y, Luo, H, Hu, X.
Deposit date:2011-12-13
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Partial inhibition of aldose reductase by nitazoxanide and its molecular basis.
Chemmedchem, 7, 2012
4KYH
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BU of 4kyh by Molmil
Crystal structure of mouse glyoxalase I complexed with zopolrestat
Descriptor: 3,4-DIHYDRO-4-OXO-3-((5-TRIFLUOROMETHYL-2-BENZOTHIAZOLYL)METHYL)-1-PHTHALAZINE ACETIC ACID, Lactoylglutathione lyase, ZINC ION
Authors:Zhai, J, Yuan, M, Zhang, L, Chen, Y, Zhang, H, Chen, S, Zhao, Y.
Deposit date:2013-05-29
Release date:2013-08-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Zopolrestat as a human glyoxalase I inhibitor and its structural basis.
Chemmedchem, 8, 2013
4KYK
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BU of 4kyk by Molmil
Crystal structure of mouse glyoxalase I complexed with indomethacin
Descriptor: INDOMETHACIN, Lactoylglutathione lyase, ZINC ION
Authors:Zhai, J, Yuan, M, Zhang, L, Chen, Y, Zhang, H, Chen, S, Zhao, Y.
Deposit date:2013-05-29
Release date:2013-08-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Zopolrestat as a human glyoxalase I inhibitor and its structural basis.
Chemmedchem, 8, 2013
2KHS
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BU of 2khs by Molmil
Solution structure of SNase121:SNase(111-143) complex
Descriptor: Nuclease, Thermonuclease
Authors:Geng, Y, Feng, Y, Xie, T, Shan, L, Wang, J.
Deposit date:2009-04-10
Release date:2009-10-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The native-like interactions between SNase121 and SNase(111-143) fragments induce the recovery of their native-like structures and the ability to degrade DNA.
Biochemistry, 48, 2009
1YV2
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BU of 1yv2 by Molmil
Hepatitis C virus NS5B RNA-dependent RNA Polymerase genotype 2a
Descriptor: GLYCEROL, RNA dependent RNA polymerase, SULFATE ION
Authors:Biswal, B.K, Cherney, M.M, Wang, M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Nicolas, O, Bedard, J, James, M.N.G.
Deposit date:2005-02-14
Release date:2005-03-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of the RNA-dependent RNA Polymerase Genotype 2a of Hepatitis C Virus Reveal Two Conformations and Suggest Mechanisms of Inhibition by Non-nucleoside Inhibitors
J.Biol.Chem., 280, 2005
1YUY
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BU of 1yuy by Molmil
HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE GENOTYPE 2a
Descriptor: RNA-Dependent RNA polymerase, SULFATE ION
Authors:Biswal, B.K, Cherney, M.M, Wang, M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Nicolas, O, Bedard, J, James, M.N.G.
Deposit date:2005-02-14
Release date:2005-03-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of the RNA dependent RNA polymerase genotype 2a of hepatitis C virus reveal two conformations and suggest mechanisms of inhibition by non-nucleoside inhibitors.
J.Biol.Chem., 280, 2005
1YVZ
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BU of 1yvz by Molmil
Hepatitis C Virus RNA Polymerase Genotype 2a In Complex With Non- Nucleoside Analogue Inhibitor
Descriptor: 3-[(2,4-DICHLOROBENZOYL)(ISOPROPYL)AMINO]-5-PHENYLTHIOPHENE-2-CARBOXYLIC ACID, RNA dependent RNA polymerase, SULFATE ION
Authors:Biswal, B.K, Cherney, M.M, Wang, M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Nicolas, O, Bedard, J, James, M.N.G.
Deposit date:2005-02-16
Release date:2005-03-22
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of the RNA dependent RNA polymerase genotype 2a of hepatitis C virus reveal two conformations and suggest mechanisms of inhibition by non-nucleoside inhibitors.
J.Biol.Chem., 280, 2005
2M00
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BU of 2m00 by Molmil
Solution structure of staphylococcal nuclease E43S mutant in the presence of ssDNA and Cd2+
Descriptor: Thermonuclease
Authors:Xie, T, Feng, Y, Shan, L, Wang, J.
Deposit date:2012-10-14
Release date:2013-03-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Modeling of the [E43S]SNase-ssDNA-Cd(2+) complex: Structural insight into the action of nuclease on ssDNA.
Arch.Biochem.Biophys., 532, 2013
4KQX
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BU of 4kqx by Molmil
Mutant Slackia exigua KARI DDV in complex with NAD and an inhibitor
Descriptor: HISTIDINE, Ketol-acid reductoisomerase, MAGNESIUM ION, ...
Authors:Brinkmann-Chen, S, Flock, T, Cahn, J.K.B, Snow, C.D, Brustad, E.M, Mcintosh, J.A, Meinhold, P, Zhang, L, Arnold, F.H.
Deposit date:2013-05-15
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:General approach to reversing ketol-acid reductoisomerase cofactor dependence from NADPH to NADH.
Proc.Natl.Acad.Sci.USA, 110, 2013
1RKN
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BU of 1rkn by Molmil
Solution structure of 1-110 fragment of Staphylococcal Nuclease with G88W mutation
Descriptor: Thermonuclease
Authors:Liu, D.S, Feng, Y.G, Ye, K.Q, Shan, L, Wang, J.F.
Deposit date:2003-11-22
Release date:2004-12-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease
Biophys.J., 92, 2007
4KQW
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BU of 4kqw by Molmil
The structure of the Slackia exigua KARI in complex with NADP
Descriptor: Ketol-acid reductoisomerase, L(+)-TARTARIC ACID, MAGNESIUM ION, ...
Authors:Brinkmann-Chen, S, Flock, T, Cahn, J.K.B, Snow, C.D, Brustad, E.M, Mcintosh, J.A, Meinhold, P, Zhang, L, Arnold, F.H.
Deposit date:2013-05-15
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:General approach to reversing ketol-acid reductoisomerase cofactor dependence from NADPH to NADH.
Proc.Natl.Acad.Sci.USA, 110, 2013
1TFP
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BU of 1tfp by Molmil
TRANSTHYRETIN (FORMERLY KNOWN AS PREALBUMIN)
Descriptor: SULFATE ION, TRANSTHYRETIN
Authors:Sunde, M, Richardson, S.J, Chang, L, Pettersson, T.M, Schreiber, G, Blake, C.C.F.
Deposit date:1996-01-05
Release date:1996-06-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of transthyretin from chicken.
Eur.J.Biochem., 236, 1996
7NS6
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BU of 7ns6 by Molmil
SARS-CoV-2 Spike (dimers) in complex with six Fu2 nanobodies
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fu2 nanobody, Spike glycoprotein,Fibritin, ...
Authors:Das, H, Hallberg, B.M.
Deposit date:2021-03-05
Release date:2022-02-02
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:A bispecific monomeric nanobody induces spike trimer dimers and neutralizes SARS-CoV-2 in vivo.
Nat Commun, 13, 2022

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