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8PGL
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BU of 8pgl by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 3027
Descriptor: 7-[(1~{S})-1-[5-(carbamimidamidomethyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, DIMETHYL SULFOXIDE, ...
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-18
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 3027
To Be Published
8PXZ
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BU of 8pxz by Molmil
Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with natural substrate
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, D-ALANINE, ...
Authors:de Munnik, M, Schofield, C.J.
Deposit date:2023-07-24
Release date:2024-08-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Biochemical and crystallographic studies of L,D-transpeptidase 2 from Mycobacterium tuberculosis with its natural monomer substrate.
Commun Biol, 7, 2024
8PYA
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BU of 8pya by Molmil
Isopenicillin N synthase in complex with Fe, O2, ACdV or thioaldehyde after 4s O2 exposure
Descriptor: (2S)-2-azanyl-6-[[(2R)-1-[[(2R)-3-methyl-1-oxidanyl-1-oxidanylidene-butan-2-yl]amino]-1-oxidanylidene-3-sulfanylidene-propan-2-yl]amino]-6-oxidanylidene-hexanoic acid, FE (III) ION, Isopenicillin N synthase, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2023-07-25
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Isopenicillin N synthase in complex with Fe, O2, ACdV or thioaldehyde after 4s O2 exposure
To Be Published
8PY8
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BU of 8py8 by Molmil
Isopenicillin N synthase in complex with Fe, ACdV and O2 after 2s O2 exposure
Descriptor: (2S)-2-azanyl-6-[[(2R)-1-[[(2R)-3-methyl-1-oxidanyl-1-oxidanylidene-butan-2-yl]amino]-1-oxidanylidene-3-sulfanylidene-propan-2-yl]amino]-6-oxidanylidene-hexanoic acid, FE (III) ION, Isopenicillin N synthase, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2023-07-25
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Isopenicillin N synthase in complex with Fe, ACdV and O2 after 2s O2 exposure
To Be Published
8PXY
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BU of 8pxy by Molmil
Crystal structure of the transpeptidase LdtMt2 C354S mutant from Mycobacterium tuberculosis in complex with natural substrate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-alpha-muramic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:de Munnik, M, Schofield, C.J.
Deposit date:2023-07-24
Release date:2024-08-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Biochemical and crystallographic studies of L,D-transpeptidase 2 from Mycobacterium tuberculosis with its natural monomer substrate.
Commun Biol, 7, 2024
8PY9
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BU of 8py9 by Molmil
Isopenicillin N synthase in complex with Fe, O2, ACdV or thioaldehyde after 3s O2 exposure
Descriptor: (2S)-2-azanyl-6-[[(2R)-1-[[(2R)-3-methyl-1-oxidanyl-1-oxidanylidene-butan-2-yl]amino]-1-oxidanylidene-3-sulfanylidene-propan-2-yl]amino]-6-oxidanylidene-hexanoic acid, FE (III) ION, Isopenicillin N synthase, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2023-07-25
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Isopenicillin N synthase in complex with Fe, O2, ACdV or thioaldehyde after 3s O2 exposure
To Be Published
8PY5
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BU of 8py5 by Molmil
Isopenicillin N synthase in complex with Fe and ACdV under anaerobic conditions
Descriptor: FE (III) ION, Isopenicillin N synthase, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2023-07-25
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Isopenicillin N synthase in complex with Fe and ACdV under anaerobic conditions
To Be Published
8PY7
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BU of 8py7 by Molmil
Isopenicillin N synthase in complex with Fe, ACdV and O2 after 1s O2 exposure
Descriptor: FE (III) ION, Isopenicillin N synthase, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2023-07-25
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Isopenicillin N synthase in complex with Fe, ACdV and O2 after 1s O2 exposure
To Be Published
8PY6
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BU of 8py6 by Molmil
Isopenicillin N synthase in complex with Fe and ACdV under anaerobic conditions
Descriptor: FE (III) ION, Isopenicillin N synthase, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2023-07-25
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Isopenicillin N synthase in complex with Fe and ACdV under anaerobic conditions
To Be Published
8Q5S
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BU of 8q5s by Molmil
Anaerobic crystal structure of apo-HIF prolyl hydroxylase 2 (PHD2 181-407)in complex with acetate (ACT) and HIF2alpha-CODD peptide
Descriptor: ACETATE ION, Egl nine homolog 1, Endothelial PAS domain-containing protein 1
Authors:Fiorini, G, Figg Jr, W.D, Schofield, C.J.
Deposit date:2023-08-09
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:HIF prolyl hydroxylase 2 in complex with HIF2alpha-CODD
To Be Published
8Q6D
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BU of 8q6d by Molmil
Anaerobic crystal structure of HIF prolyl hydroxylase 2 (PHD2 181-407) in complex with HIF2alpha-CODD peptide (523-542), Fe(II) and 2-oxoglutarate (2OG)
Descriptor: 2-OXOGLUTARIC ACID, Egl nine homolog 1, Endothelial PAS domain-containing protein 1, ...
Authors:Fiorini, G, Figg Jr, W.D, Schofield, C.J.
Deposit date:2023-08-11
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:HIF prolyl hydroxylase 2 in complex with HIF2alpha-CODD
To Be Published
8Q64
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BU of 8q64 by Molmil
Crystal structure of hydroxylated HIF2alpha-CODD peptide (523-542) bound to apo-HIF prolyl hydroxylase 2 (PHD2 181-407)
Descriptor: ACETATE ION, Egl nine homolog 1, Endothelial PAS domain-containing protein 1
Authors:Fiorini, G, Figg Jr, W.D, Schofield, C.J.
Deposit date:2023-08-10
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:HIF prolyl hydroxylase 2 in complex with HIF2alpha-CODD
To Be Published
8Q6E
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BU of 8q6e by Molmil
Aerobic crystal structure of HIF prolyl hydroxylase 2 (PHD2 181-407) in complex with Fe(III), 2-oxoglutarate (2OG) and HIF2alpha-CODD peptide
Descriptor: 2-OXOGLUTARIC ACID, CHLORIDE ION, Egl nine homolog 1, ...
Authors:Fiorini, G, Figg Jr, W.D, Schofield, C.J.
Deposit date:2023-08-11
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:HIF prolyl hydroxylase 2 in complex with HIF2alpha-CODD
To Be Published
1RXG
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BU of 1rxg by Molmil
DEACETOXYCEPHALOSPORIN C SYNTHASE COMPLEXED WITH FE(II) AND 2-OXOGLUTARATE
Descriptor: 2-OXOGLUTARIC ACID, DEACETOXYCEPHALOSPORIN C SYNTHASE, FE (III) ION, ...
Authors:Valegard, K, Terwisscha Van Scheltinga, A.C, Lloyd, M.D, Hara, T, Ramaswamy, S, Perrakis, A, Thompson, A, Lee, H.J, Baldwin, J.E, Shofield, C.J, Hajdu, J, Andersson, I.
Deposit date:1998-06-05
Release date:1999-06-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of a cephalosporin synthase.
Nature, 394, 1998
2BJS
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BU of 2bjs by Molmil
Isopenicillin N synthase C-terminal truncation mutant
Descriptor: FE (III) ION, ISOPENICILLIN N SYNTHETASE, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:McNeill, L.A, Sami, M, Clifton, I.J, Burzlaff, N.I.
Deposit date:2005-02-07
Release date:2006-03-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Terminally Truncated Isopenicillin N Synthase Generates a Dithioester Product: Evidence for a Thioaldehyde Intermediate during Catalysis and a New Mode of Reaction for Non-Heme Iron Oxidases.
Chemistry, 23, 2017
4KQO
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BU of 4kqo by Molmil
Crystal structure of penicillin-binding protein 3 from pseudomonas aeruginosa in complex with piperacillin
Descriptor: CHLORIDE ION, GLYCEROL, IMIDAZOLE, ...
Authors:Nettleship, J.E, Stuart, D.I, Owens, R.J, Ren, J.
Deposit date:2013-05-15
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Binding of (5S)-Penicilloic Acid to Penicillin Binding Protein 3.
Acs Chem.Biol., 8, 2013
6KGT
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BU of 6kgt by Molmil
Crystal structure of Penicillin binding protein 3 (PBP3) from Mycobacterium tuerculosis, complexed with faropenem
Descriptor: (2R)-2-[(1S,2R)-1-carboxy-2-hydroxypropyl]-5-[(2R)-oxolan-2-yl]-2,3-dihydro-1,3-thiazole-4-carboxylic acid, COBALT (II) ION, Penicillin-binding protein PbpB
Authors:Lu, Z.K, Zhang, A.L, Liu, X, Guddat, L, Yang, H.T, Rao, Z.H.
Deposit date:2019-07-12
Release date:2020-03-11
Method:X-RAY DIFFRACTION (2.308 Å)
Cite:Structures ofMycobacterium tuberculosisPenicillin-Binding Protein 3 in Complex with Fivebeta-Lactam Antibiotics Reveal Mechanism of Inactivation.
Mol.Pharmacol., 97, 2020
4KQR
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BU of 4kqr by Molmil
CRYSTAL STRUCTURE OF PENICILLIN-BINDING PROTEIN 3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH (5S)-Penicilloic Acid
Descriptor: (2S,4S)-2-[(R)-carboxy{[(2R)-2-{[(4-ethyl-2,3-dioxopiperazin-1-yl)carbonyl]amino}-2-phenylacetyl]amino}methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Nettleship, J.E, Stuart, D.I, Owens, R.J, Ren, J.
Deposit date:2013-05-15
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Binding of (5S)-Penicilloic Acid to Penicillin Binding Protein 3.
Acs Chem.Biol., 8, 2013
6KGU
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BU of 6kgu by Molmil
Crystal structure of Penicillin binding protein 3 (PBP3) from Mycobacterium tuerculosis, complexed with aztreonam
Descriptor: 2-({[(1Z)-1-(2-amino-1,3-thiazol-4-yl)-2-oxo-2-{[(2S,3S)-1-oxo-3-(sulfoamino)butan-2-yl]amino}ethylidene]amino}oxy)-2-methylpropanoic acid, COBALT (II) ION, Penicillin-binding protein PbpB
Authors:Lu, Z.K, Zhang, A.L, Liu, X, Guddat, L, Yang, H.T, Rao, Z.H.
Deposit date:2019-07-12
Release date:2020-03-11
Method:X-RAY DIFFRACTION (2.106 Å)
Cite:Structures ofMycobacterium tuberculosisPenicillin-Binding Protein 3 in Complex with Fivebeta-Lactam Antibiotics Reveal Mechanism of Inactivation.
Mol.Pharmacol., 97, 2020
6KGV
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BU of 6kgv by Molmil
Crystal structure of Penicillin binding protein 3 (PBP3) from Mycobacterium tuerculosis, complexed with amoxicillin
Descriptor: 2-{1-[2-AMINO-2-(4-HYDROXY-PHENYL)-ACETYLAMINO]-2-OXO-ETHYL}-5,5-DIMETHYL-THIAZOLIDINE-4-CARBOXYLIC ACID, COBALT (II) ION, Penicillin-binding protein PbpB
Authors:Lu, Z.K, Zhang, A.L, Liu, X, Guddat, L, Yang, H.T, Rao, Z.H.
Deposit date:2019-07-12
Release date:2020-03-11
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structures ofMycobacterium tuberculosisPenicillin-Binding Protein 3 in Complex with Fivebeta-Lactam Antibiotics Reveal Mechanism of Inactivation.
Mol.Pharmacol., 97, 2020
6KGH
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BU of 6kgh by Molmil
Crystal structure of Penicillin binding protein 3 (PBP3) from Mycobacterium tuerculosis (apo-form)
Descriptor: COBALT (II) ION, Penicillin-binding protein PbpB, SODIUM ION
Authors:Lu, Z.K, Zhang, A.L, Liu, X, Guddat, L, Yang, H.T, Rao, Z.H.
Deposit date:2019-07-11
Release date:2020-03-11
Method:X-RAY DIFFRACTION (2.108 Å)
Cite:Structures ofMycobacterium tuberculosisPenicillin-Binding Protein 3 in Complex with Fivebeta-Lactam Antibiotics Reveal Mechanism of Inactivation.
Mol.Pharmacol., 97, 2020
6RTN
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BU of 6rtn by Molmil
Crystal structure of OXA-10 with VNRX-5133
Descriptor: (3~{R})-3-[2-[4-(2-azanylethylamino)cyclohexyl]ethanoylamino]-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid, Beta-lactamase OXA-10, CHLORIDE ION
Authors:Brem, J, Schofield, C.
Deposit date:2019-05-24
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Bicyclic Boronate VNRX-5133 Inhibits Metallo- and Serine-beta-Lactamases.
J.Med.Chem., 62, 2019
6RGS
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BU of 6rgs by Molmil
Crystal Structure of Phenylalanine Ammonia Lyase (PAL) from Petroselinum crispum bound to cinnamate
Descriptor: (E)-3-(4-methoxyphenyl)acrylic acid, Phenylalanine ammonia-lyase 1
Authors:Brem, J, Lang, P, Bencze, C.-L, Schofield, C.
Deposit date:2019-04-17
Release date:2019-09-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.42001033 Å)
Cite:Mapping the Hydrophobic Substrate Binding Site of Phenylalanine Ammonia Lyase from Petroselinum crispum
Acs Catalysis, 2019
6RRM
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BU of 6rrm by Molmil
Crystal structure of LdtMt2 from Mycobacterium tuberculosis bound to Ebselen
Descriptor: 1,2-ETHANEDIOL, AMMONIUM ION, GLYCEROL, ...
Authors:Brem, J, Lohans, C, Schofield, C.
Deposit date:2019-05-20
Release date:2019-08-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Targeting the Mycobacterium tuberculosis transpeptidase LdtMt2with cysteine-reactive inhibitors including ebselen.
Chem.Commun.(Camb.), 55, 2019
6RLG
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BU of 6rlg by Molmil
Crystal structure of LdtMt2 from Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, L,D-transpeptidase 2, ...
Authors:Brem, J, Lohans, C, Schofield, C.
Deposit date:2019-05-02
Release date:2019-08-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.51000178 Å)
Cite:Targeting the Mycobacterium tuberculosis transpeptidase LdtMt2with cysteine-reactive inhibitors including ebselen.
Chem.Commun.(Camb.), 55, 2019

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