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1VDT
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BU of 1vdt by Molmil
The crystal structure of the tetragonal form of hen egg white lysozyme at 1.7 angstroms resolution under basic conditions in space
Descriptor: Lysozyme C
Authors:Aibara, S, Suzuki, A, Kidera, A, Shibata, K, Yamane, T, DeLucas, L.J, Hirose, M.
Deposit date:2004-03-24
Release date:2004-04-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of the tetragonal form of hen egg white lysozyme at 1.7 angstroms resolution under basic conditions in space
to be published
1VED
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BU of 1ved by Molmil
The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.9 angstroms resolution in space
Descriptor: Lysozyme C
Authors:Aibara, S, Suzuki, A, Kidera, A, Shibata, K, Yamane, T, DeLucas, L.J, Hirose, M.
Deposit date:2004-03-30
Release date:2004-04-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.9 angstroms resolution in space
To be Published
1VDS
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BU of 1vds by Molmil
The crystal structure of the tetragonal form of hen egg white lysozyme at 1.6 angstroms resolution in space
Descriptor: Lysozyme C
Authors:Aibara, S, Suzuki, A, Kidera, A, Shibata, K, Yamane, T, DeLucas, L.J, Hirose, M.
Deposit date:2004-03-24
Release date:2004-04-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the tetragonal form of hen egg white lysozyme at 1.6 angstroms resolution in space
to be published
1V7M
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BU of 1v7m by Molmil
Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody TN1 Fab
Descriptor: Monoclonal TN1 Fab Heavy Chain, Monoclonal TN1 Fab Light Chain, Thrombopoietin
Authors:Feese, M.D, Tamada, T, Kato, Y, Maeda, Y, Hirose, M, Matsukura, Y, Shigematsu, H, Kato, T, Miyazaki, H, Kuroki, R.
Deposit date:2003-12-18
Release date:2004-03-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure of the receptor-binding domain of human thrombopoietin determined by complexation with a neutralizing antibody fragment
Proc.Natl.Acad.Sci.USA, 101, 2004
1V7N
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BU of 1v7n by Molmil
Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody TN1 Fab
Descriptor: Monoclonal TN1 Fab Heavy Chain, Monoclonal TN1 Fab Light Chain, Thrombopoietin
Authors:Feese, M.D, Tamada, T, Kato, Y, Maeda, Y, Hirose, M, Matsukura, Y, Shigematsu, H, Kato, T, Miyazaki, H, Kuroki, R.
Deposit date:2003-12-18
Release date:2004-03-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the receptor-binding domain of human thrombopoietin determined by complexation with a neutralizing antibody fragment
Proc.Natl.Acad.Sci.USA, 101, 2004
2ZQ3
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BU of 2zq3 by Molmil
The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.6 angstroms resolution
Descriptor: Lysozyme C, SODIUM ION
Authors:Aibara, S, Suzuki, A, Kidera, A, Shibata, K, Hirose, M.
Deposit date:2008-08-03
Release date:2008-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.5 angstroms resolution
To be Published
2ZQ4
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BU of 2zq4 by Molmil
The crystal structure of the orthorhombic form of hen egg white lysozyme at 2.0 angstroms resolution
Descriptor: Lysozyme C
Authors:Aibara, S, Suzuki, A, Kidera, A, Shibata, K, Yamane, T, Hirose, M.
Deposit date:2008-08-03
Release date:2008-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.5 angstroms resolution
To be Published
3WR7
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BU of 3wr7 by Molmil
Crystal Structure of Spermidine Acetyltransferase from Escherichia coli
Descriptor: COENZYME A, SPERMIDINE, Spermidine N1-acetyltransferase
Authors:Sugiyama, S, Ishikawa, S, Tomitori, S, Niiyama, M, Hirose, M, Miyazaki, Y, Higashi, K, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Kashiwagi, K, Igarashi, K, Matsumura, H.
Deposit date:2014-02-20
Release date:2015-09-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism underlying promiscuous polyamine recognition by spermidine acetyltransferase
Int.J.Biochem.Cell Biol., 76, 2016
1UHG
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BU of 1uhg by Molmil
Crystal Structure of S-Ovalbumin At 1.9 Angstrom Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ovalbumin, ...
Authors:Yamasaki, M, Takahashi, N, Hirose, M.
Deposit date:2003-07-03
Release date:2003-07-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of S-ovalbumin as a Non-loop-inserted Thermostabilized Serpin Form
J.Biol.Chem., 278, 2003
3WVM
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BU of 3wvm by Molmil
The 0.88 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with stearic acid
Descriptor: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Matsumura, H, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-25
Release date:2015-01-28
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (0.88 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type fatty-acid-binding protein.
Angew.Chem.Int.Ed.Engl., 54, 2015
1TFA
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BU of 1tfa by Molmil
OVOTRANSFERRIN, N-TERMINAL LOBE, APO FORM
Descriptor: PROTEIN (OVOTRANSFERRIN), SULFATE ION
Authors:Mizutani, K, Yamashita, H, Mikami, B, Hirose, M.
Deposit date:1999-01-07
Release date:1999-01-13
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Alternative structural state of transferrin. The crystallographic analysis of iron-loaded but domain-opened ovotransferrin N-lobe.
J.Biol.Chem., 274, 1999
4FC0
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BU of 4fc0 by Molmil
Crystal Structure of Human Kinase Domain of B-raf with a DFG-out Inhibitor
Descriptor: 2-chloro-3-[(2-cyanopropan-2-yl)oxy]-N-{5-[{2-[(cyclopropylcarbonyl)amino][1,3]thiazolo[5,4-b]pyridin-5-yl}(methyl)amino]-2-fluorophenyl}benzamide, Serine/threonine-protein kinase B-raf
Authors:Yano, J.K, Aertgeerts, K.
Deposit date:2012-05-23
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Design and synthesis of novel DFG-out RAF/vascular endothelial growth factor receptor 2 (VEGFR2) inhibitors: 3. Evaluation of 5-amino-linked thiazolo[5,4-d]pyrimidine and thiazolo[5,4-b]pyridine derivatives.
Bioorg.Med.Chem., 20, 2012
4KSP
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BU of 4ksp by Molmil
Crystal Structure of Human B-raf bound to a DFG-out Inhibitor TAK-632
Descriptor: N-{7-cyano-6-[4-fluoro-3-({[3-(trifluoromethyl)phenyl]acetyl}amino)phenoxy]-1,3-benzothiazol-2-yl}cyclopropanecarboxamide, Serine/threonine-protein kinase B-raf
Authors:Yano, J.K, Masanori, O.
Deposit date:2013-05-17
Release date:2013-07-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Discovery of a Selective Kinase Inhibitor (TAK-632) Targeting Pan-RAF Inhibition: Design, Synthesis, and Biological Evaluation of C-7-Substituted 1,3-Benzothiazole Derivatives.
J.Med.Chem., 56, 2013
4KSQ
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BU of 4ksq by Molmil
Crystal Structure of Human B-raf bound to a DFG-out Inhibitor 5B
Descriptor: N-{7-cyano-6-[4-fluoro-3-({[3-(trifluoromethyl)phenyl]carbamoyl}amino)phenoxy]-1,3-benzothiazol-2-yl}cyclopropanecarboxamide, Serine/threonine-protein kinase B-raf
Authors:Yano, J.K, Masanori, O.
Deposit date:2013-05-17
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Discovery of a Selective Kinase Inhibitor (TAK-632) Targeting Pan-RAF Inhibition: Design, Synthesis, and Biological Evaluation of C-7-Substituted 1,3-Benzothiazole Derivatives.
J.Med.Chem., 56, 2013
2YZ1
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BU of 2yz1 by Molmil
Crystal structure of the ligand-binding domain of murine SHPS-1/SIRP alpha
Descriptor: Tyrosine-protein phosphatase non-receptor type substrate 1
Authors:Nakaishi, A.
Deposit date:2007-05-02
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural insight into the specific interaction between murine SHPS-1/SIRP alpha and its ligand CD47
J.Mol.Biol., 375, 2008
7W71
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BU of 7w71 by Molmil
Crystal structure of the PDZ-C domain of E. coli RseP in complex with 12C7 Fab
Descriptor: Heavy chain of Fab, Light chain of Fab, Regulator of sigma-E protease RseP
Authors:Hirose, T, Katagiri, S, Nogi, T.
Deposit date:2021-12-02
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP.
Sci Adv, 8, 2022
4DBN
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BU of 4dbn by Molmil
Crystal Structure of the Kinase domain of Human B-raf with a [1,3]thiazolo[5,4-b]pyridine derivative
Descriptor: 2-chloro-3-(1-cyanocyclopropyl)-N-[5-({2-[(cyclopropylcarbonyl)amino][1,3]thiazolo[5,4-b]pyridin-5-yl}oxy)-2-fluorophenyl]benzamide, Serine/threonine-protein kinase B-raf
Authors:Yano, J.K, Aertgeerts, K.
Deposit date:2012-01-16
Release date:2012-04-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Design and synthesis of novel DFG-out RAF/vascular endothelial growth factor receptor 2 (VEGFR2) inhibitors. 1. Exploration of [5,6]-fused bicyclic scaffolds.
J.Med.Chem., 55, 2012
1NNT
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BU of 1nnt by Molmil
STRUCTURAL EVIDENCE FOR A PH-SENSITIVE DI-LYSINE TRIGGER IN THE HEN OVOTRANSFERRIN N-LOBE: IMPLICATIONS FOR TRANSFERRIN IRON RELEASE
Descriptor: CARBONATE ION, FE (III) ION, OVOTRANSFERRIN
Authors:Dewan, J.C, Mikami, B, Sacchettini, J.C.
Deposit date:1993-09-15
Release date:1994-10-15
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural evidence for a pH-sensitive dilysine trigger in the hen ovotransferrin N-lobe: implications for transferrin iron release.
Biochemistry, 32, 1993
8X3H
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BU of 8x3h by Molmil
Crystal structure of iron-bound recombinant ovotransferrin N-lobe at 0.93 angstrom resolution
Descriptor: CARBONATE ION, FE (III) ION, GLYCEROL, ...
Authors:Toyoda, M, Mikami, B, Mizutani, K.
Deposit date:2023-11-13
Release date:2023-12-13
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Crystal structure of iron-bound ovotransferrin N-lobe at atomic resolution
To Be Published
5AVD
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BU of 5avd by Molmil
The 0.86 angstrom structure of elastase crystallized in high-strength agarose hydrogel
Descriptor: Chymotrypsin-like elastase family member 1, SULFATE ION
Authors:Sugiyama, S, Shimizu, N, Maruyama, M, Sazaki, G, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H.
Deposit date:2015-06-15
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
5AVH
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BU of 5avh by Molmil
The 0.90 angstrom structure (I222) of glucose isomerase crystallized in high-strength agarose hydrogel
Descriptor: Xylose isomerase
Authors:Sugiyama, S, Shimizu, N, Maruyama, N, Sazaki, G, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H.
Deposit date:2015-06-16
Release date:2015-07-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
5AVN
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BU of 5avn by Molmil
The 1.03 angstrom structure (P212121) of glucose isomerase crystallized in high-strength agarose hydrogel
Descriptor: CALCIUM ION, MANGANESE (II) ION, SULFATE ION, ...
Authors:Sugiyama, S, Shimizu, N, Maruyama, N, Sazaki, G, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H.
Deposit date:2015-06-23
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
1EHA
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BU of 1eha by Molmil
CRYSTAL STRUCTURE OF GLYCOSYLTREHALOSE TREHALOHYDROLASE FROM SULFOLOBUS SOLFATARICUS
Descriptor: GLYCOSYLTREHALOSE TREHALOHYDROLASE
Authors:Feese, M.D, Kato, Y, Tamada, T, Kato, M, Komeda, T, Kobayashi, K, Kuroki, R.
Deposit date:2000-02-19
Release date:2001-02-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of glycosyltrehalose trehalohydrolase from the hyperthermophilic archaeum Sulfolobus solfataricus.
J.Mol.Biol., 301, 2000
1EH9
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BU of 1eh9 by Molmil
CRYSTAL STRUCTURE OF SULFOLOBUS SOLFATARICUS GLYCOSYLTREHALOSE TREHALOHYDROLASE
Descriptor: GLYCOSYLTREHALOSE TREHALOHYDROLASE
Authors:Feese, M.D, Kato, Y, Tamada, T, Kato, M, Komeda, T, Kobayashi, K, Kuroki, R.
Deposit date:2000-02-19
Release date:2001-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of glycosyltrehalose trehalohydrolase from the hyperthermophilic archaeum Sulfolobus solfataricus.
J.Mol.Biol., 301, 2000
7CQD
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BU of 7cqd by Molmil
The NZ-1 Fab complexed with the PDZ tandem fragment of A. aeolicus S2P homolog with the PA14 tag inserted between the residues 235 and 236
Descriptor: Heavy chain of antigen binding fragment, Fab of NZ-1, Light chain of antigen binding fragment, ...
Authors:Tamura-Sakaguchi, R, Aruga, R, Nogi, T.
Deposit date:2020-08-10
Release date:2021-05-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Moving toward generalizable NZ-1 labeling for 3D structure determination with optimized epitope-tag insertion.
Acta Crystallogr D Struct Biol, 77, 2021

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