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3WE2
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BU of 3we2 by Molmil
Structure of BLM RQC domain bound to a phosphate ion
Descriptor: ACETATE ION, Bloom syndrome protein, PHOSPHATE ION
Authors:Kim, S.Y, Hakoshima, T, Kitano, K.
Deposit date:2013-06-28
Release date:2013-11-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the RecQ C-terminal Domain of Human Bloom Syndrome Protein
Sci Rep, 3, 2013
3WIM
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BU of 3wim by Molmil
GABARAP-LIR peptide complex
Descriptor: Gamma-aminobutyric acid receptor-associated protein, WD repeat and FYVE domain-containing protein 3
Authors:Lystad, A, Ichimura, Y, Takagi, K, Yang, Y, Pankiv, S, Mizushima, T, Komatsu, M, Simonsen, A.
Deposit date:2013-09-19
Release date:2014-03-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:GABARAP-LIR peptide complex
To be Published, 2014
3WQO
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BU of 3wqo by Molmil
Crystal structure of D-tagatose 3-epimerase-like protein
Descriptor: MANGANESE (II) ION, Uncharacterized protein MJ1311
Authors:Uechi, K, Takata, G, Yoneda, K, Ohshima, T, Sakuraba, H.
Deposit date:2014-01-28
Release date:2014-07-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structure of D-tagatose 3-epimerase-like protein from Methanocaldococcus jannaschii
Acta Crystallogr.,Sect.F, 70, 2014
3WE3
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BU of 3we3 by Molmil
Structure of BLM RQC domain bound to an arsenate ion
Descriptor: ACETATE ION, ARSENATE, Bloom syndrome protein
Authors:Kim, S.Y, Hakoshima, T, Kitano, K.
Deposit date:2013-06-28
Release date:2013-11-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the RecQ C-terminal Domain of Human Bloom Syndrome Protein
Sci Rep, 3, 2013
3WIC
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BU of 3wic by Molmil
Structure of a substrate/cofactor-unbound glucose dehydrogenase
Descriptor: Glucose 1-dehydrogenase, PENTAETHYLENE GLYCOL, S-1,2-PROPANEDIOL, ...
Authors:Sakuraba, H, Kanoh, Y, Yoneda, K, Ohshima, T.
Deposit date:2013-09-10
Release date:2014-05-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insight into glucose dehydrogenase from the thermoacidophilic archaeon Thermoplasma volcanium.
Acta Crystallogr.,Sect.D, 70, 2014
2YSJ
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BU of 2ysj by Molmil
Solution structure of the RING domain (1-56) from tripartite motif-containing protein 31
Descriptor: Tripartite motif-containing protein 31, ZINC ION
Authors:Qin, X.R, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RING domain (1-56) from tripartite motif-containing protein 31
To be Published
2YSL
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BU of 2ysl by Molmil
Solution structure of the RING domain (1-66) from tripartite motif-containing protein 31
Descriptor: Tripartite motif-containing protein 31, ZINC ION
Authors:Qin, X.R, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RING domain (1-66) from tripartite motif-containing protein 31
To be Published
2ZC0
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BU of 2zc0 by Molmil
Crystal structure of an archaeal alanine:glyoxylate aminotransferase
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Alanine glyoxylate transaminase, IMIDAZOLE, ...
Authors:Sakuraba, H, Yoneda, K, Tsuge, H, Ohshima, T.
Deposit date:2007-10-31
Release date:2008-06-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of an archaeal alanine:glyoxylate aminotransferase
Acta Crystallogr.,Sect.D, 64, 2008
3A4U
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BU of 3a4u by Molmil
Crystal structure of MCFD2 in complex with carbohydrate recognition domain of ERGIC-53
Descriptor: CALCIUM ION, GLYCEROL, Multiple coagulation factor deficiency protein 2, ...
Authors:Nishio, M, Kamiya, Y, Mizushima, T, Wakatsuki, S, Sasakawa, H, Yamamoto, K, Uchiyama, S, Noda, M, McKay, A.R, Fukui, K, Hauri, H.P, Kato, K.
Deposit date:2009-07-17
Release date:2010-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural basis for the cooperative interplay between the two causative gene products of combined factor V and factor VIII deficiency.
Proc.Natl.Acad.Sci.USA, 107, 2010
3AAF
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BU of 3aaf by Molmil
Structure of WRN RQC domain bound to double-stranded DNA
Descriptor: ACETATE ION, DNA (5'-D(*AP*CP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*GP*T)-3'), Werner syndrome ATP-dependent helicase
Authors:Kitano, K, Hakoshima, T.
Deposit date:2009-11-16
Release date:2010-02-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for DNA strand separation by the unconventional winged-helix domain of RecQ helicase WRN
Structure, 18, 2010
336D
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BU of 336d by Molmil
INTERACTION BETWEEN LEFT-HANDED Z-DNA AND POLYAMINE-3 THE CRYSTAL STRUCTURE OF THE D(CG)3 AND THERMOSPERMINE COMPLEX
Descriptor: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION, N-(3-AMINO-PROPYL)-N-(5-AMINOPROPYL)-1,4-DIAMINOBUTANE
Authors:Ohishi, H, Terasoma, N, Nakanishi, I, Van Der Marel, G, Van Boom, J.H, Rich, A, Wang, A.H.-J, Hakoshima, T, Tomita, K.-I.
Deposit date:1997-06-24
Release date:1998-04-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1 Å)
Cite:Interaction between left-handed Z-DNA and polyamine - 3. The crystal structure of the d(CG)3 and thermospermine complex.
FEBS Lett., 398, 1996
2ZDJ
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BU of 2zdj by Molmil
Crystal Structure of TTMA177, a Hypothetical Protein from Thermus thermophilus phage TMA
Descriptor: hypothetical protein TTMA177
Authors:Agari, Y, Tamakoshi, M, Yamagishi, A, Shinkai, A, Ebihara, A, Yokoyama, S, Kuramitsu, S, Oshima, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-26
Release date:2008-12-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of TTMA177, a Hypothetical Protein from Thermus thermophilus phage TMA
To be Published
3AY8
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BU of 3ay8 by Molmil
Glutathione S-transferase unclassified 2 from Bombyx mori
Descriptor: GLYCEROL, Glutathione S-transferase
Authors:Kakuta, Y, Usuda, K, Nakashima, T, Kimura, M, Aso, Y, Yamamoto, K.
Deposit date:2011-05-02
Release date:2011-09-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic survey of active sites of an unclassified glutathione transferase from Bombyx mori
Biochim.Biophys.Acta, 1810, 2011
2YVS
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BU of 2yvs by Molmil
Crystal structure of glycolate oxidase subunit GlcE from Thermus thermophilus HB8
Descriptor: Glycolate oxidase subunit GlcE
Authors:Yoneda, K, Sakuraba, H, Kuramitsu, S, Ohshima, T.
Deposit date:2007-04-15
Release date:2008-04-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of glycolate oxidase subunit GlcE from Thermus thermophilus HB8
To be Published
2ZSH
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BU of 2zsh by Molmil
Structural basis of gibberellin(GA3)-induced DELLA recognition by the gibberellin receptor
Descriptor: DELLA protein GAI, GIBBERELLIN A3, Probable gibberellin receptor GID1L1
Authors:Murase, K, Hirano, Y, Sun, T.P, Hakoshima, T.
Deposit date:2008-09-10
Release date:2008-11-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Gibberellin-induced DELLA recognition by the gibberellin receptor GID1
Nature, 456, 2008
2ZSI
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BU of 2zsi by Molmil
Structural basis of gibberellin(GA4)-induced DELLA recognition by the gibberellin receptor
Descriptor: DELLA protein GAI, GIBBERELLIN A4, Probable gibberellin receptor GID1L1
Authors:Murase, K, Hirano, Y, Sun, T.P, Hakoshima, T.
Deposit date:2008-09-10
Release date:2008-11-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Gibberellin-induced DELLA recognition by the gibberellin receptor GID1
Nature, 456, 2008
3ABI
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BU of 3abi by Molmil
Crystal Structure of L-Lysine Dehydrogenase from Hyperthermophilic Archaeon Pyrococcus horikoshii
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative uncharacterized protein PH1688, SULFATE ION
Authors:Yoneda, K, Sakuraba, H, Fukuda, J, Ohshima, T.
Deposit date:2009-12-14
Release date:2009-12-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:First crystal structure of L-lysine 6-dehydrogenase as an NAD-dependent amine dehydrogenase.
J.Biol.Chem., 285, 2010
3AH8
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BU of 3ah8 by Molmil
Structure of heterotrimeric G protein Galpha-q beta gamma in complex with an inhibitor YM-254890
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Nishimura, A, Kitano, K, Takasaki, J, Taniguchi, M, Mizuno, N, Tago, K, Hakoshima, T, Itoh, H.
Deposit date:2010-04-20
Release date:2010-07-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for the specific inhibition of heterotrimeric Gq protein by a small molecule.
Proc.Natl.Acad.Sci.USA, 107, 2010
2D11
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BU of 2d11 by Molmil
Crystal structure of the Radixin FERM domain complexed with the NHERF-2 C-terminal tail peptide
Descriptor: Na(+)/H(+) exchange regulatory cofactor NHE-RF2, Radixin
Authors:Terawaki, S, Maesaki, R, Hakoshima, T.
Deposit date:2005-08-11
Release date:2006-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural basis for NHERF recognition by ERM proteins
Structure, 14, 2006
2D10
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BU of 2d10 by Molmil
Crystal structure of the Radixin FERM domain complexed with the NHERF-1 C-terminal tail peptide
Descriptor: Ezrin-radixin-moesin binding phosphoprotein 50, Radixin
Authors:Terawaki, S, Maesaki, R, Hakoshima, T.
Deposit date:2005-08-11
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for NHERF recognition by ERM proteins
Structure, 14, 2006
2CS8
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BU of 2cs8 by Molmil
Solution structure of tandem repeat of the fifth and sixth zinc-finger C2HC domains from human ST18
Descriptor: KIAA0535 protein, ZINC ION
Authors:Suetake, T, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of tandem repeat of the fifth and sixth zinc-finger C2HC domains from human ST18
To be Published
2DL6
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BU of 2dl6 by Molmil
Solution structure of the first BRK domain from human chromodomain-helicase-DNA-binding protein 8
Descriptor: Chromodomain-helicase-DNA-binding protein 8
Authors:Suetake, T, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-17
Release date:2006-10-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first BRK domain from human chromodomain-helicase-DNA-binding protein 8
To be Published
2DCH
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BU of 2dch by Molmil
Crystal structure of archaeal intron-encoded homing endonuclease I-Tsp061I
Descriptor: CHLORIDE ION, SULFATE ION, putative homing endonuclease
Authors:Nakayama, H, Tsuge, H, Shimamura, T, Miyano, M, Nomura, N, Sako, Y.
Deposit date:2006-01-06
Release date:2006-07-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structure of a hyperthermophilic archaeal homing endonuclease, I-Tsp061I: contribution of cross-domain polar networks to thermostability.
J.Mol.Biol., 365, 2007
2E4H
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BU of 2e4h by Molmil
Solution structure of cytoskeletal protein in complex with tubulin tail
Descriptor: Restin, Tubulin alpha-ubiquitous chain
Authors:Mishima, M, Hakoshima, T.
Deposit date:2006-12-08
Release date:2007-08-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for tubulin recognition by cytoplasmic linker protein 170 and its autoinhibition
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EO1
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BU of 2eo1 by Molmil
Solution structure of the ig domain of human OBSCN protein
Descriptor: CDNA FLJ14124 fis, clone MAMMA1002498
Authors:Nagashima, K, Nagashima, T, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the ig domain of human OBSCN protein
To be Published

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