Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2GHB
DownloadVisualize
BU of 2ghb by Molmil
Thermotoga maritima maltotriose binding protein, ligand free form
Descriptor: maltose ABC transporter, periplasmic maltose-binding protein
Authors:Cuneo, M.J, Changela, A, Hocker, B, Beese, L.S, Hellinga, H.W.
Deposit date:2006-03-27
Release date:2007-02-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:T. maritima maltotriose binding protein open form
To be Published
2GH9
DownloadVisualize
BU of 2gh9 by Molmil
Thermus thermophilus maltotriose binding protein bound with maltotriose
Descriptor: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, maltose/maltodextrin-binding protein
Authors:Cuneo, M.J, Changela, A, Beese, L.S, Hellinga, H.W.
Deposit date:2006-03-27
Release date:2007-02-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural adaptations that modulate monosaccharide, disaccharide, and trisaccharide specificities in periplasmic maltose-binding proteins.
J.Mol.Biol., 389, 2009
2G9F
DownloadVisualize
BU of 2g9f by Molmil
Crystal structure of intein-tagged mouse PNGase C-terminal domain
Descriptor: CHLORIDE ION, GLYCEROL, peptide N-glycanase
Authors:Zhou, X, Zhao, G, Wang, L, Li, G, Lennarz, W.J, Schindelin, H.
Deposit date:2006-03-06
Release date:2006-10-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and biochemical studies of the C-terminal domain of mouse peptide-N-glycanase identify it as a mannose-binding module.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2GHA
DownloadVisualize
BU of 2gha by Molmil
Thermotoga maritima maltotriose binding protein bound with maltotriose
Descriptor: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, maltose ABC transporter, periplasmic maltose-binding protein
Authors:Cuneo, M.J, Changela, A, Hocker, B, Beese, L.S, Hellinga, H.W.
Deposit date:2006-03-27
Release date:2007-02-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:T. maritima maltotriose binding protein
To be Published
3Q8S
DownloadVisualize
BU of 3q8s by Molmil
Human DNA polymerase iota incorporating dTTP opposite 8-oxo-guanine
Descriptor: DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), DNA polymerase iota, ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2011-01-06
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Human DNA polymerase iota incorporating dTTP opposite 8-oxo-guanine
To be Published
3QEA
DownloadVisualize
BU of 3qea by Molmil
Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA (complex II)
Descriptor: BARIUM ION, DNA (5'-D(P*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), ...
Authors:Orans, J, McSweeney, E.A, Iyer, R.R, Hast, M.A, Hellinga, H.W, Modrich, P, Beese, L.S.
Deposit date:2011-01-20
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family.
Cell(Cambridge,Mass.), 145, 2011
3PR5
DownloadVisualize
BU of 3pr5 by Molmil
Dpo4 Y12A mutant incorporating ADP opposite template dT
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3'), ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2010-11-29
Release date:2011-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural mechanism of ribonucleotide discrimination by a Y-family DNA polymerase.
J.Mol.Biol., 407, 2011
1EU1
DownloadVisualize
BU of 1eu1 by Molmil
THE CRYSTAL STRUCTURE OF RHODOBACTER SPHAEROIDES DIMETHYLSULFOXIDE REDUCTASE REVEALS TWO DISTINCT MOLYBDENUM COORDINATION ENVIRONMENTS.
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CADMIUM ION, ...
Authors:Li, H.K, Temple, K, Rajagopalan, K.V, Schindelin, H.
Deposit date:2000-04-13
Release date:2000-08-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The 1.3 A Crystal Structure of Rhodobacter sphaeroides Dimethylsulfoxide Reductase Reveals Two Distinct Molybdenum Coordination Environments
J.Am.Chem.Soc., 122, 2000
2RDI
DownloadVisualize
BU of 2rdi by Molmil
Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex forms
Descriptor: DI(HYDROXYETHYL)ETHER, DNA polymerase IV, GLYCEROL
Authors:Wong, J.H.Y, Ling, H.
Deposit date:2007-09-24
Release date:2008-06-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4.
J.Mol.Biol., 379, 2008
3Q8P
DownloadVisualize
BU of 3q8p by Molmil
Human DNA polymerase iota incorporating dCTP opposite 8-oxo-guanine
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2011-01-06
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
3Q8Q
DownloadVisualize
BU of 3q8q by Molmil
Human DNA polymerase iota incorporating dATP opposite 8-oxo-guanine
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2011-01-06
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.031 Å)
Cite:Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QEB
DownloadVisualize
BU of 3qeb by Molmil
Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA and Mn2+ (complex III)
Descriptor: DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), Exonuclease 1, ...
Authors:Orans, J, McSweeney, E.A, Iyer, R.R, Hast, M.A, Hellinga, H.W, Modrich, P, Beese, L.S.
Deposit date:2011-01-20
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family.
Cell(Cambridge,Mass.), 145, 2011
2G9G
DownloadVisualize
BU of 2g9g by Molmil
Crystal structure of His-tagged mouse PNGase C-terminal domain
Descriptor: GLYCEROL, SULFATE ION, peptide N-glycanase
Authors:Zhou, X, Zhao, G, Wang, L, Li, G, Lennarz, W.J, Schindelin, H.
Deposit date:2006-03-06
Release date:2006-10-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and biochemical studies of the C-terminal domain of mouse peptide-N-glycanase identify it as a mannose-binding module.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3R3M
DownloadVisualize
BU of 3r3m by Molmil
Crystal structure of the FAF1 UBX domain
Descriptor: FAS-associated factor 1, PHOSPHATE ION
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2011-03-16
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Hierarchical Binding of Cofactors to the AAA ATPase p97.
Structure, 19, 2011
3Q8R
DownloadVisualize
BU of 3q8r by Molmil
Human DNA polymerase iota incorporating dGTP opposite 8-oxo-guanine
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2011-01-06
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QE9
DownloadVisualize
BU of 3qe9 by Molmil
Crystal structure of human exonuclease 1 Exo1 (D173A) in complex with DNA (complex I)
Descriptor: CALCIUM ION, DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), ...
Authors:Orans, J, McSweeney, E.A, Iyer, R.R, Hast, M.A, Hellinga, H.W, Modrich, P, Beese, L.S.
Deposit date:2011-01-20
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family.
Cell(Cambridge,Mass.), 145, 2011
2IPM
DownloadVisualize
BU of 2ipm by Molmil
Crystal structure of a disulfide mutant glucose binding protein
Descriptor: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2006-10-12
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:The free energy cost of domain reorganization in E. coli glucose binding protein
To be Published
2GX6
DownloadVisualize
BU of 2gx6 by Molmil
Rational stabilization of E. coli ribose binding protein
Descriptor: D-ribose-binding periplasmic protein, beta-D-ribopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2006-05-08
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Rational stabilization of E. coli ribose binding protein
To be Published
2IPN
DownloadVisualize
BU of 2ipn by Molmil
Crystal structure of a disulfide mutant glucose binding protein
Descriptor: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2006-10-12
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:The free energy cost of domain reorganization in E. coli glucose binding protein
To be Published
2HPJ
DownloadVisualize
BU of 2hpj by Molmil
Crystal structure of the PUB domain of mouse PNGase
Descriptor: GLYCEROL, PNGase
Authors:Zhao, G, Zhou, X, Wang, L, Li, G, Lennarz, W, Schindelin, H.
Deposit date:2006-07-17
Release date:2007-05-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Studies on peptide:N-glycanase-p97 interaction suggest that p97 phosphorylation modulates endoplasmic reticulum-associated degradation.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2HPH
DownloadVisualize
BU of 2hph by Molmil
High resolution structure of E. coli glucose/galactose binding protein bound with glucose
Descriptor: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2006-07-17
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:High resolution structure of E. coli glucose/galactose binding protein bound with glucose
To be Published
1ED0
DownloadVisualize
BU of 1ed0 by Molmil
NMR structural determination of viscotoxin A3 from Viscum album L.
Descriptor: VISCOTOXIN A3
Authors:Romagnoli, S, Ugolini, R, Fogolari, F, Schaller, G, Urech, K, Giannattasio, M, Ragona, L, Molinari, H.
Deposit date:2000-01-26
Release date:2000-02-04
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structural determination of viscotoxin A3 from Viscum album L.
Biochem.J., 350, 2000
3E3G
DownloadVisualize
BU of 3e3g by Molmil
H. influenzae beta-carbonic anhydrase, variant G41A
Descriptor: Carbonic anhydrase 2, SULFATE ION, ZINC ION
Authors:Rowlett, R.S, Failing, H.
Deposit date:2008-08-07
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase .
Biochemistry, 49, 2010
2IOY
DownloadVisualize
BU of 2ioy by Molmil
Crystal structure of Thermoanaerobacter tengcongensis ribose binding protein
Descriptor: Periplasmic sugar-binding protein, beta-D-ribopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2006-10-11
Release date:2007-03-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The backbone structure of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein is essentially identical to its mesophilic E. coli homolog.
Bmc Struct.Biol., 8, 2008
2IPL
DownloadVisualize
BU of 2ipl by Molmil
Crystal structure of a disulfide mutant glucose binding protein
Descriptor: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2006-10-12
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The free energy cost of domain reorganization in E. coli glucose binding protein
To be Published

224201

건을2024-08-28부터공개중

PDB statisticsPDBj update infoContact PDBjnumon