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3MK5
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BU of 3mk5 by Molmil
Crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase domain from Mycobacterium tuberculosis with sulfate and zinc at pH 4.00
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, SULFATE ION, ZINC ION
Authors:Singh, M, Karthikeyan, S.
Deposit date:2010-04-14
Release date:2011-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural basis for pH dependent monomer-dimer transition of 3,4-dihydroxy 2-butanone-4-phosphate synthase domain from Mycobacterium tuberculosis
J.Struct.Biol., 174, 2011
4KGQ
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BU of 4kgq by Molmil
Crystal structure of a human light loop mutant in complex with dcr3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Tumor necrosis factor ligand superfamily member 14, ...
Authors:Liu, W, Zhan, C, Bonanno, J.B, Sampathkumar, P, Toro, R, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2013-04-29
Release date:2013-07-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Mechanistic basis for functional promiscuity in the TNF and TNF receptor superfamilies: structure of the LIGHT:DcR3 assembly.
Structure, 22, 2014
8Q93
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BU of 8q93 by Molmil
Crystal structure of the SARS-COV-2 RBD with neutralizing-VHHs Re30H02 and Re21D01
Descriptor: Nanobody Re21D01, Nanobody Re30H02, Spike protein S1
Authors:Aksu, M, Guttler, T, Rymarenko, O, Gorlich, D.
Deposit date:2023-08-19
Release date:2023-12-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Nanobodies to multiple spike variants and inhalation of nanobody-containing aerosols neutralize SARS-CoV-2 in cell culture and hamsters.
Antiviral Res., 221, 2023
8Q95
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BU of 8q95 by Molmil
Crystal structure of the SARS-CoV-2 BA.1 RBD with neutralizing-VHHs Ma16B06 and Ma3F05
Descriptor: Nanobody Ma16B06, Nanobody Ma3F05, Spike protein S1
Authors:Aksu, M, Rymarenko, O, Guttler, T, Gorlich, D.
Deposit date:2023-08-19
Release date:2023-12-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Nanobodies to multiple spike variants and inhalation of nanobody-containing aerosols neutralize SARS-CoV-2 in cell culture and hamsters.
Antiviral Res., 221, 2023
8Q94
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BU of 8q94 by Molmil
Crystal structure of The SARS-COV-2 BA.2.75 RBD with neutralizing-VHHs Re32D03 and Ma3B12
Descriptor: Nanobody Ma3B12, Nanobody Re32D03, Spike protein S1
Authors:Aksu, M, Guttler, T, Gorlich, D.
Deposit date:2023-08-19
Release date:2023-12-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Nanobodies to multiple spike variants and inhalation of nanobody-containing aerosols neutralize SARS-CoV-2 in cell culture and hamsters.
Antiviral Res., 221, 2023
8QHP
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BU of 8qhp by Molmil
Cysteine tRNA ligase homodimer
Descriptor: Cysteine--tRNA ligase, ZINC ION
Authors:Pacesa, M, Correia, B.E, Levy, E.D.
Deposit date:2023-09-08
Release date:2023-11-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
8Q70
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BU of 8q70 by Molmil
tRNA pseudouridine synthase A homodimer
Descriptor: CHLORIDE ION, MAGNESIUM ION, tRNA pseudouridine synthase A
Authors:Pacesa, M, Correia, B.E, Levy, E.D.
Deposit date:2023-08-15
Release date:2023-11-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
8P49
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BU of 8p49 by Molmil
Uncharacterized Q8U0N8 protein from Pyrococcus furiosus
Descriptor: Q8U0N8 protein
Authors:Pacesa, M, Correia, B.E, Levy, E.D.
Deposit date:2023-05-19
Release date:2023-11-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
3B6S
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BU of 3b6s by Molmil
Crystal Structure of hla-b*2705 Complexed with the Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor (vipr) Peptide (residues 400-408)
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-27 alpha chain, ...
Authors:Beltrami, A, Rossmann, M, Fiorillo, M.T, Sorrentino, R, Saenger, W, Ziegler, A, Uchanska-Ziegler, A.
Deposit date:2007-10-29
Release date:2008-07-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Citrullination-dependent Differential Presentation of a Self-peptide by HLA-B27 Subtypes.
J.Biol.Chem., 283, 2008
4KF7
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BU of 4kf7 by Molmil
Nup188(aa1-1160) from Myceliophthora thermophila
Descriptor: Nup188
Authors:Schwartz, T.U, Andersen, K.R.
Deposit date:2013-04-26
Release date:2013-06-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Scaffold nucleoporins Nup188 and Nup192 share structural and functional properties with nuclear transport receptors.
Elife, 2, 2013
4KF8
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BU of 4kf8 by Molmil
Nup188(aa1445-1827) from Myceliophthora thermophila
Descriptor: Nup188
Authors:Schwartz, T.U, Andersen, K.R.
Deposit date:2013-04-26
Release date:2013-06-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Scaffold nucleoporins Nup188 and Nup192 share structural and functional properties with nuclear transport receptors.
Elife, 2, 2013
5V2W
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BU of 5v2w by Molmil
Crystal structure of a LuxS from salmonella typhi
Descriptor: S-ribosylhomocysteine lyase, ZINC ION
Authors:Perumal, P, Raina, R, Manoj Kumar, P, Arockisamy, A, SundaraBaalaji, N.
Deposit date:2017-03-06
Release date:2017-08-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a LuxS from salmonella typhi
To Be Published
7MKV
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BU of 7mkv by Molmil
Engineered PLP-dependent decarboxylative aldolase from Aspergillus flavus, UstD2.0, bound as the internal aldimine
Descriptor: Cysteine desulfurase-like protein ustD
Authors:Ellis, J.M, Buller, A.R, Bingman, C.A.
Deposit date:2021-04-27
Release date:2022-05-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Biocatalytic synthesis of non-standard amino acids by a decarboxylative aldol reaction
Nat Catal, 5, 2022
9IA8
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BU of 9ia8 by Molmil
Crystal Structure of UFC1 K108R
Descriptor: Ubiquitin-fold modifier-conjugating enzyme 1
Authors:Manoj Kumar, P, Banerjee, S, Wiener, R.
Deposit date:2025-02-08
Release date:2025-05-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:UFC1 reveals the multifactorial and plastic nature of oxyanion holes in E2 conjugating enzymes.
Nat Commun, 16, 2025
9I9M
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BU of 9i9m by Molmil
Crystal structure of chimeric UFC1, TAK MotiF replaced with HPN motif of other E2 proteins
Descriptor: GLYCEROL, Ubiquitin-fold modifier-conjugating enzyme 1
Authors:Manoj Kumar, P, Banerjee, S, Wiener, R.
Deposit date:2025-02-06
Release date:2025-05-07
Method:X-RAY DIFFRACTION (1.543 Å)
Cite:UFC1 reveals the multifactorial and plastic nature of oxyanion holes in E2 conjugating enzymes.
Nat Commun, 16, 2025
9I9O
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BU of 9i9o by Molmil
Crystal Structure of UFC1 K108M
Descriptor: Ubiquitin-fold modifier-conjugating enzyme 1
Authors:Manoj Kumar, P, Banerjee, S, Wiener, R.
Deposit date:2025-02-06
Release date:2025-05-07
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:UFC1 reveals the multifactorial and plastic nature of oxyanion holes in E2 conjugating enzymes.
Nat Commun, 16, 2025
9I9P
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BU of 9i9p by Molmil
Crystal Structure of UFC1 W145H
Descriptor: GLYCEROL, SULFATE ION, Ubiquitin-fold modifier-conjugating enzyme 1
Authors:Manoj Kumar, P, Banerjee, S, Weiner, R.
Deposit date:2025-02-06
Release date:2025-05-07
Method:X-RAY DIFFRACTION (2.022 Å)
Cite:UFC1 reveals the multifactorial and plastic nature of oxyanion holes in E2 conjugating enzymes.
Nat Commun, 16, 2025
9I9N
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BU of 9i9n by Molmil
Crystal Structure of UFC1 C116E & K108A
Descriptor: GLYCEROL, SULFATE ION, Ubiquitin-fold modifier-conjugating enzyme 1
Authors:Manoj Kumar, P, Banerjee, S, Weiner, R.
Deposit date:2025-02-06
Release date:2025-05-07
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:UFC1 reveals the multifactorial and plastic nature of oxyanion holes in E2 conjugating enzymes.
Nat Commun, 16, 2025
9I1S
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BU of 9i1s by Molmil
Crystal structure of the SARS-CoV-2 helicase NSP13 in complex with myricetin
Descriptor: 3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Helicase nsp13, ...
Authors:Kloskowski, P, Neumann, P, Ficner, R.
Deposit date:2025-01-16
Release date:2025-06-11
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Myricetin-bound crystal structure of the SARS-CoV-2 helicase NSP13 facilitates the discovery of novel natural inhibitors.
Acta Crystallogr D Struct Biol, 81, 2025
9I4V
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BU of 9i4v by Molmil
Crystal structure of the SARS-CoV-2 helicase NSP13
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, PHOSPHATE ION, SARS-CoV-2 helicase NSP13, ...
Authors:Kloskowski, P, Neumann, P, Ficner, R.
Deposit date:2025-01-27
Release date:2025-06-11
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Myricetin-bound crystal structure of the SARS-CoV-2 helicase NSP13 facilitates the discovery of novel natural inhibitors.
Acta Crystallogr D Struct Biol, 81, 2025
5AFS
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BU of 5afs by Molmil
structure of Zn-bound periplasmic metal binding protein from candidatus liberibacter asiaticus
Descriptor: ACETATE ION, GLYCEROL, PERIPLASMIC SOLUTE BINDING PROTEIN, ...
Authors:Sharma, N, Selvakumar, P, Kumar, P, Sharma, A.K.
Deposit date:2015-01-23
Release date:2016-02-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure analysis in Zn(2+)-bound state and biophysical characterization of CLas-ZnuA2.
Biochim. Biophys. Acta, 1864, 2016
2NBY
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BU of 2nby by Molmil
Solution structure of the J domain of EMCV IRES
Descriptor: IRES RNA (39-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2NBX
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BU of 2nbx by Molmil
Solution structure of the J-K region of EMCV IRES
Descriptor: IRES RNA (108-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2NBZ
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BU of 2nbz by Molmil
Solution structure of the K domain of EMCV IRES
Descriptor: IRES RNA 40-MER
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2NC0
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BU of 2nc0 by Molmil
Solution structure of the St domain of EMCV IRES
Descriptor: IRES RNA (28-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016

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