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2QFN
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BU of 2qfn by Molmil
X-ray Crystal Structure Analysis of the Binding Site in the Ferric and Oxyferrous Forms of the Recombinant Heme Dehaloperoxidase Cloned from Amphitrite ornata
分子名称: AMMONIUM ION, Dehaloperoxidase A, OXYGEN MOLECULE, ...
著者de Serrano, V, Chen, Z, Davis, M.F, Franzen, S.
登録日2007-06-27
公開日2008-05-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献X-ray crystal structural analysis of the binding site in the ferric and oxyferrous forms of the recombinant heme dehaloperoxidase cloned from Amphitrite ornata
Acta Crystallogr.,Sect.D, 63, 2007
3K3U
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BU of 3k3u by Molmil
The V59W mutation blocks the distal pocket of the hemoglobin dehaloperoxidase from Amphitrite ornata
分子名称: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者de Serrano, V, Davis, M.F, Franzen, S.
登録日2009-10-05
公開日2010-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献The V59W mutation blocks the distal pocket of the hemoglobin dehaloperoxidase from Amphitrite ornata
To be Published
6MRJ
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BU of 6mrj by Molmil
Crystal structure of H.pylori NikR in complex with DNA
分子名称: DNA (36-MER), MAGNESIUM ION, NICKEL (II) ION, ...
著者Pozharski, E, de Serrano, V.
登録日2018-10-13
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of H.pylori NikR in complex with DNA
To Be Published
1U8Y
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BU of 1u8y by Molmil
CRystal structures of Ral-GppNHp and Ral-GDP reveal two novel binding sites that are also present in Ras and Rap
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein Ral-A
著者Nicely, N.I, Kosak, J, de Serrano, V, Mattos, C.
登録日2004-08-09
公開日2004-11-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structures of Ral-GppNHp and Ral-GDP Reveal Two Binding Sites that Are Also Present in Ras and Rap
Structure, 12, 2004
1U8Z
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BU of 1u8z by Molmil
Crystal structures of Ral-GppNHp and Ral-GDP reveal two novel binding sites that are also present in Ras and Rap
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Ral-A
著者Nicely, N.I, Kosak, J, de Serrano, V, Mattos, C.
登録日2004-08-09
公開日2004-11-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structures of Ral-GppNHp and Ral-GDP Reveal Two Binding Sites that Are Also Present in Ras and Rap
Structure, 12, 2004
1U90
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BU of 1u90 by Molmil
Crystal structures of Ral-GppNHp and Ral-GDP reveal two novel binding sites that are also present in Ras and Rap
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Ral-A
著者Nicely, N.I, Kosak, J, de Serrano, V, Mattos, C.
登録日2004-08-09
公開日2004-11-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Ral-GppNHp and Ral-GDP Reveal Two Binding Sites that Are Also Present in Ras and Rap
Structure, 12, 2004
5CCA
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BU of 5cca by Molmil
Crystal structure of Mtb toxin
分子名称: Endoribonuclease MazF3
著者Cascio, D, Arbing, M, de Serrano, V, Eisenberg, D, Miallau, L, TB Structural Genomics Consortium (TBSGC)
登録日2015-07-01
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of Mtb toxin
To Be Published
1P2S
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BU of 1p2s by Molmil
H-Ras 166 in 50% 2,2,2 triflouroethanol
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, TRIFLUOROETHANOL, ...
著者Buhrman, G.K, de Serrano, V, Mattos, C.
登録日2003-04-16
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Organic Solvents Order the Dynamic Switch II in Ras Crystals
Structure, 11, 2003
1P2T
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BU of 1p2t by Molmil
H-Ras 166 in Aqueous mother liqour, RT
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Transforming protein p21/H-RAS-1
著者Buhrman, G.K, de Serrano, V, Mattos, C.
登録日2003-04-16
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Organic solvents order the dynamic switch II in Ras crystals
Structure, 11, 2003
1P2U
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BU of 1p2u by Molmil
H-Ras in 50% isopropanol
分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Buhrman, G.K, de Serrano, V, Mattos, C.
登録日2003-04-16
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Organic solvents order the dynamic switch II in Ras crystals
Structure, 11, 2003
1P2V
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BU of 1p2v by Molmil
H-RAS 166 in 60 % 1,6 hexanediol
分子名称: HEXANE-1,6-DIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Buhrman, G.K, de Serrano, V, Mattos, C.
登録日2003-04-16
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Organic solvents order the dynamic switch II in Ras crystals
Structure, 11, 2003
3IXF
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BU of 3ixf by Molmil
Crystal Structure of Dehaloperoxidase B at 1.58 and Structural Characterization of the AB Dimer from Amphitrite ornata
分子名称: Dehaloperoxidase B, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者de Serrano, V.S, D'Antonio, J, Thompson, M.K, Franzen, S, Ghiladi, R.A.
登録日2009-09-03
公開日2010-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structure of dehaloperoxidase B at 1.58 A resolution and structural characterization of the AB dimer from Amphitrite ornata.
Acta Crystallogr.,Sect.D, 66, 2010
3ORD
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BU of 3ord by Molmil
Structural Evidence for Stabilization of Inhibitor Binding by a Protein Cavity in the Dehaloperoxidase-Hemoglobin from Amphitrite ornata
分子名称: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
著者de Serrano, V.S, Franzen, S.
登録日2010-09-06
公開日2011-09-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structural evidence for stabilization of inhibitor binding by a protein cavity in the dehaloperoxidase-hemoglobin from Amphitrite ornata.
Biopolymers, 98, 2012
4ILZ
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BU of 4ilz by Molmil
Structural and kinetic study of an internal substrate binding site of dehaloperoxidase-hemoglobin A from Amphitrite ornata
分子名称: 2,4,6-TRIBROMOPHENOL, Dehaloperoxidase A, ISOPROPYL ALCOHOL, ...
著者de Serrano, V.S, Zhao, J, Zhao, J, Franzen, S.
登録日2013-01-01
公開日2013-03-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural and Kinetic Study of an Internal Substrate Binding Site in Dehaloperoxidase-Hemoglobin A from Amphitrite ornata.
Biochemistry, 52, 2013
7SJD
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BU of 7sjd by Molmil
Crystal structure of dehaloperoxidase B in complex with terpinolene
分子名称: 1-methyl-4-(propan-2-ylidene)cyclohex-1-ene, Dehaloperoxidase B, GLYCEROL, ...
著者Ghiladi, R.A, de Serrano, V.S, Yun, D, Malewschik, T.
登録日2021-10-17
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.703 Å)
主引用文献The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
7SJI
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BU of 7sji by Molmil
Crystal structure of dehaloperoxidase B in complex with R-(+)-limonene
分子名称: (4R)-1-methyl-4-(prop-1-en-2-yl)cyclohex-1-ene, Dehaloperoxidase B, GLYCEROL, ...
著者Ghiladi, R.A, de Serrano, V.S, Malewschik, T, Yun, D.
登録日2021-10-17
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
7SJC
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BU of 7sjc by Molmil
Crystal structure of dehaloperoxidase B in complex with gamma-terpinene
分子名称: 1-methyl-4-(propan-2-yl)cyclohexa-1,4-diene, Dehaloperoxidase B, GLYCEROL, ...
著者Malewschik, T, Yun, D, de Serrano, V.S, Ghiladi, R.A.
登録日2021-10-17
公開日2022-11-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
7SJG
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BU of 7sjg by Molmil
Structure of Dehaloperoxidase B in Complex with Thymoquinone
分子名称: (6R)-4-hydroxy-6-methyl-3-(propan-2-yl)cyclohexa-2,4-dien-1-one, 2-methyl-5-(propan-2-yl)benzene-1,4-diol, Dehaloperoxidase B, ...
著者Ghiladi, R.A, de Serrano, V.S, Malewschik, T, Yun, D.
登録日2021-10-17
公開日2022-11-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
7SJH
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BU of 7sjh by Molmil
Crystal structure of dehaloperoxidase B in complex with S-(-)-limonene
分子名称: (4S)-1-methyl-4-(prop-1-en-2-yl)cyclohex-1-ene, Dehaloperoxidase B, GLYCEROL, ...
著者Ghiladi, R.A, de Serrano, V.S, Malewschik, T, Yun, D.
登録日2021-10-17
公開日2022-11-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
7SJF
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BU of 7sjf by Molmil
Structure of Dehaloperoxidase B in Complex with Thymol
分子名称: 5-METHYL-2-(1-METHYLETHYL)PHENOL, Dehaloperoxidase B, GLYCEROL, ...
著者Ghiladi, R.A, de Serrano, V.S, Malewschik, T, Yun, D.
登録日2021-10-17
公開日2022-11-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
6CH6
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BU of 6ch6 by Molmil
Dehaloperoxidase B in complex with substrate 2,4-dimethoxyphenol
分子名称: 2,4-dimethoxyphenol, Dehaloperoxidase B, GLYCEROL, ...
著者de Serrano, V.S, Carey, L.M, Ghiladi, R.A.
登録日2018-02-22
公開日2019-01-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase.
Biochemistry, 57, 2018
3DR9
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BU of 3dr9 by Molmil
Increased Distal Histidine Conformational Flexibility in the Deoxy Form of Dehaloperoxidase from Amphitrite ornata
分子名称: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Chen, X, de Serrano, V.S, Betts, L, Franzen, S.
登録日2008-07-10
公開日2009-01-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Distal histidine conformational flexibility in dehaloperoxidase from Amphitrite ornata.
Acta Crystallogr.,Sect.D, 65, 2009
8VSK
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BU of 8vsk by Molmil
Crystal structure of Dehaloperoxidase A in complex with substrate 2,4-dibromophenol
分子名称: 2,4-bis(bromanyl)phenol, DI(HYDROXYETHYL)ETHER, Dehaloperoxidase A, ...
著者Aktar, M.S, de Serrano, V.S, Ghiladi, R.A, Franzen, S.
登録日2024-01-24
公開日2024-07-17
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.515 Å)
主引用文献Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Biochemistry, 63, 2024
8VKD
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BU of 8vkd by Molmil
Crystal structure of dehaloperoxidase A in complex with substrate 4-nitrocatechol
分子名称: 4-NITROCATECHOL, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
著者Aktar, M.S, de Serrano, V.S, Ghiladi, R.A, Franzen, S.
登録日2024-01-08
公開日2024-07-17
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Biochemistry, 63, 2024
8VZR
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BU of 8vzr by Molmil
Crystal structure of dehaloperoxidase A in complex with substrate 4-bromo-o-cresol
分子名称: 4-bromo-2-methylphenol, DI(HYDROXYETHYL)ETHER, Dehaloperoxidase A, ...
著者Aktar, M.S, de Serrano, V.S, Ghiladi, R.A, Franzen, S.
登録日2024-02-12
公開日2024-07-17
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Biochemistry, 63, 2024

 

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