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2G74
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BU of 2g74 by Molmil
Y104F mutant of type 1 isopentenylpyrophosphate-dimethylallylpyrophosphate isomerase
分子名称: Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, MANGANESE (II) ION
著者de Ruyck, J, Wouters, J.
登録日2006-02-27
公開日2006-04-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography.
J.Biol.Chem., 281, 2006
2VNQ
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BU of 2vnq by Molmil
Monoclinic form of IDI-1
分子名称: IMIDAZOLE, ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE, MANGANESE (II) ION, ...
著者de Ruyck, J, Oudjama, Y, Wouters, J.
登録日2008-02-06
公開日2008-03-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Monoclinic Form of Isopentenyl Diphosphate Isomerase: A Case of Polymorphism in Biomolecular Crystals.
Acta Crystallogr.,Sect.F, 64, 2008
2VNP
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BU of 2vnp by Molmil
Monoclinic form of IDI-1
分子名称: 2-DIMETHYLAMINO-ETHYL-DIPHOSPHATE, ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE, MAGNESIUM ION, ...
著者de Ruyck, J, Oudjama, Y, Wouters, J.
登録日2008-02-06
公開日2008-03-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Monoclinic Form of Isopentenyl Diphosphate Isomerase: A Case of Polymorphism in Biomolecular Crystals.
Acta Crystallogr.,Sect.F, 64, 2008
2G73
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BU of 2g73 by Molmil
Y104F mutant type 1 IPP isomerase complex with EIPP
分子名称: 4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, ...
著者de Ruyck, J, Wouters, J.
登録日2006-02-27
公開日2006-04-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography.
J.Biol.Chem., 281, 2006
3DH7
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BU of 3dh7 by Molmil
Structure of T. thermophilus IDI-2 in complex with PPi
分子名称: FLAVIN MONONUCLEOTIDE, Isopentenyl-diphosphate delta-isomerase, PYROPHOSPHATE 2-
著者de Ruyck, J, Wouters, J.
登録日2008-06-17
公開日2008-09-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Crystal structure of type 2 isopentenyl diphosphate isomerase from Thermus thermophilus in complex with inorganic pyrophosphate
Biochemistry, 47, 2008
5AAP
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BU of 5aap by Molmil
Complex of the FimH lectin with a C-linked para-biphenyl methylene alpha-D-mannoside
分子名称: 1,2-ETHANEDIOL, FIMH, GLYCEROL, ...
著者De Ruyck, J, Bouckaert, J.
登録日2015-07-27
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.302 Å)
主引用文献Structures of C-Mannosylated Anti-Adhesives Bound to the Type 1 Fimbrial Fimh Adhesin
Iucrj, 3, 2016
5AAL
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BU of 5aal by Molmil
Complex of the FimH lectin with a C-linked para-biphenyl ethylene alpha-D-mannoside in soaked trigonal crystals at 2.45 A resolution
分子名称: (2R,3S,4R,5S,6R)-2-(hydroxymethyl)-6-[(Z)-3-(4-phenylphenyl)prop-2-enyl]oxane-3,4,5-triol, FIMH, NICKEL (II) ION, ...
著者De Ruyck, J, Bouckaert, J.
登録日2015-07-27
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structures of C-Mannosylated Anti-Adhesives Bound to the Type 1 Fimbrial Fimh Adhesin
Iucrj, 3, 2016
5ABZ
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BU of 5abz by Molmil
Complex of the FimH lectin with a C-linked naphtyl alpha-D-mannoside in soaked trigonal crystals at 2.40 A resolution
分子名称: (2R,3S,4R,5S,6R)-2-(HYDROXYMETHYL)-6-[3-(NAPHTHALEN-1-YL)PROPYL]OXANE-3,4,5-TRIOL, FIMH, NICKEL (II) ION
著者de Ruyck, J, Bouckaert, J.
登録日2015-08-10
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of C-Mannosylated Anti-Adhesives Bound to the Type 1 Fimbrial Fimh Adhesin
Iucrj, 3, 2016
4N02
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BU of 4n02 by Molmil
Type 2 IDI from S. pneumoniae
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, Isopentenyl-diphosphate delta-isomerase, SULFATE ION
著者de Ruyck, J, Schubert, H.L, Poulter, C.D.
登録日2013-09-30
公開日2014-07-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Determination of Kinetics and the Crystal Structure of a Novel Type 2 Isopentenyl Diphosphate: Dimethylallyl Diphosphate Isomerase from Streptococcus pneumoniae.
Chembiochem, 15, 2014
6YHW
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BU of 6yhw by Molmil
Co-crystals in the P212121 space group, of a beta-cyclodextrin spacered by triazole heptyl from alpha-D-mannose, with FimH lectin at 2.00 A resolution.
分子名称: 2H-1,2,3-TRIAZOL-4-YLMETHANOL, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), FimH, ...
著者de Ruyck, J, Bouckaert, J.
登録日2020-03-31
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.962 Å)
主引用文献The Antiadhesive Strategy in Crohn's Disease: Orally Active Mannosides to Decolonize Pathogenic Escherichia coli from the Gut.
Chembiochem, 17, 2016
5MTS
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BU of 5mts by Molmil
Complex of FimH lectin with a TazMan (thiazolylaminomannosides) family member known as potent anti-adhesive agent at 2.6 A resolution
分子名称: NICKEL (II) ION, Protein FimH, [2-[[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]amino]-1,3-thiazol-5-yl]-(4-methyl-2-pyrazin-2-yl-1,3-thiazol-5-yl)methanone
著者de Ruyck, J, Bouckaert, J.
登録日2017-01-10
公開日2017-03-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Physiochemical Tuning of Potent Escherichia coli Anti-Adhesives by Microencapsulation and Methylene Homologation.
ChemMedChem, 12, 2017
7OO2
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BU of 7oo2 by Molmil
Crystal structure of an antibody targeting the capsular polysaccharide of serogroup X Neisseria meningitidis (MenX)
分子名称: THIOCYANATE ION, anti-MenX Fab heavy chain, anti-MenX Fab light chain
著者Pietri, G.P, de Ruyck, J, Lenac, T, Adamo, R, Bouckaert, J.
登録日2021-05-26
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Elucidating the Structural and Minimal Protective Epitope of the Serogroup X Meningococcal Capsular Polysaccharide.
Front Mol Biosci, 8, 2021
6SDU
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BU of 6sdu by Molmil
Xyloglucanase domain of NopAA, a type three effector from Sinorhizobium fredii in complex with cellobiose
分子名称: Type III effector NopAA, beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Dorival, D, Philys, S, Guintini, E, Brailly, R, de Ruyck, J, Czjzek, M, Biondi, E.
登録日2019-07-29
公開日2020-07-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and enzymatic characterisation of the Type III effector NopAA (=GunA) from Sinorhizobium fredii USDA257 reveals a Xyloglucan hydrolase activity.
Sci Rep, 10, 2020
2B2K
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BU of 2b2k by Molmil
structure of Y104F IDI-1 mutant in complex with EIPP
分子名称: 4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, ...
著者Wouters, J.
登録日2005-09-19
公開日2006-09-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography
J.Biol.Chem., 281, 2006
1R67
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BU of 1r67 by Molmil
Y104A MUTANT OF E.COLI IPP ISOMERASE
分子名称: Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION
著者Wouters, J.
登録日2003-10-15
公開日2003-10-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography.
J.Biol.Chem., 281, 2006
7QUO
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BU of 7quo by Molmil
FimH lectin domain in complex with oligomannose-6
分子名称: FimH, NICKEL (II) ION, SULFATE ION, ...
著者Bouckaert, J, Bourenkov, G.P.
登録日2022-01-18
公開日2023-02-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors
J.Biol.Chem., 299, 2023
7BHD
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BU of 7bhd by Molmil
FimH in complex with alpha1,6 core-fucosylated oligomannose-3, crystallized in the trigonal space group
分子名称: NICKEL (II) ION, SULFATE ION, Type 1 fimbrin D-mannose specific adhesin, ...
著者Bridot, C, Bouckaert, J, Krammer, E.-M.
登録日2021-01-11
公開日2022-07-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors.
J.Biol.Chem., 299, 2023
8BXY
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BU of 8bxy by Molmil
FimH in complex with alpha1,6 core-fucosylated oligomannose-3, crystallized in the trigonal space group
分子名称: NICKEL (II) ION, SULFATE ION, Type 1 fimbrin D-mannose specific adhesin, ...
著者Bridot, C, Bouckaert, J, Krammer, E.-M.
登録日2022-12-11
公開日2023-04-12
最終更新日2023-04-26
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors.
J.Biol.Chem., 299, 2023
8BY3
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BU of 8by3 by Molmil
FimH lectin domain in complex with oligomannose-6
分子名称: NICKEL (II) ION, SULFATE ION, Type 1 fimbrin D-mannose specific adhesin, ...
著者Bouckaert, J, Bourenkov, G.P.
登録日2022-12-11
公開日2023-04-12
最終更新日2023-04-26
実験手法X-RAY DIFFRACTION (3.186 Å)
主引用文献Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors.
J.Biol.Chem., 299, 2023

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