Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5FLE
DownloadVisualize
BU of 5fle by Molmil
High resolution NI,FE-CODH-320 mV with CN state
分子名称: CARBON MONOXIDE DEHYDROGENASE 2, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ciaccafava, A, Tombolelli, D, Domnik, L, Fesseler, J, Jeoung, J.-H, Dobbek, H, Mroginski, M.A, Hildebrandt, P, Zebger, I.
登録日2015-10-26
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献When the inhibitor tells more than the substrate: the cyanide-bound state of a carbon monoxide dehydrogenase.
Chem Sci, 7, 2016
6QII
DownloadVisualize
BU of 6qii by Molmil
Xenon derivatization of the F420-reducing [NiFe] hydrogenase complex from Methanosarcina barkeri
分子名称: (R,R)-2,3-BUTANEDIOL, Coenzyme F420 hydrogenase subunit alpha, Coenzyme F420 hydrogenase subunit beta, ...
著者Ilina, Y, Lorent, C, Katz, S, Jeoung, J.H, Shima, S, Horch, M, Zebger, I, Dobbek, H.
登録日2019-01-19
公開日2019-10-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases.
Angew.Chem.Int.Ed.Engl., 58, 2019
6QGT
DownloadVisualize
BU of 6qgt by Molmil
The carbon monoxide inhibition of F420-reducing [NiFe] hydrogenase complex from Methanosarcina barkeri
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, (R,R)-2,3-BUTANEDIOL, Coenzyme F420 hydrogenase subunit beta, ...
著者Ilina, Y, Lorent, C, Katz, S, Jeoung, J.H, Shima, S, Horch, M, Zebger, I, Dobbek, H.
登録日2019-01-12
公開日2019-10-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.988 Å)
主引用文献X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases.
Angew.Chem.Int.Ed.Engl., 58, 2019
6QGR
DownloadVisualize
BU of 6qgr by Molmil
The F420-reducing [NiFe] hydrogenase complex from Methanosarcina barkeri at the Nia-S state
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, (R,R)-2,3-BUTANEDIOL, Coenzyme F420 hydrogenase subunit alpha, ...
著者Ilina, Y, Lorent, C, Katz, S, Jeoung, J.H, Shima, S, Horch, M, Zebger, I, Dobbek, H.
登録日2019-01-12
公開日2019-10-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.839 Å)
主引用文献X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases.
Angew.Chem.Int.Ed.Engl., 58, 2019
8BJ7
DownloadVisualize
BU of 8bj7 by Molmil
Desulfovibrio desulfuricans FeFe Hydrogenase C178A mutant in Hinact-like state
分子名称: Binuclear [FeFe], di(thiomethyl)amine, carbon monoxide, ...
著者Bikbaev, K, Span, I.
登録日2022-11-03
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Binding of exogenous cyanide reveals new active-site states in [FeFe] hydrogenases.
Chem Sci, 14, 2023
8BJ8
DownloadVisualize
BU of 8bj8 by Molmil
Desulfovibrio desulfuricans FeFe Hydrogenase C178A mutant in Htrans-like state
分子名称: Binuclear [FeFe], di(thiomethyl)amine, carbon monoxide, ...
著者Bikbaev, K, Span, I.
登録日2022-11-03
公開日2023-04-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Binding of exogenous cyanide reveals new active-site states in [FeFe] hydrogenases.
Chem Sci, 14, 2023
4UTK
DownloadVisualize
BU of 4utk by Molmil
XenA - reduced - Y183F variant
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, SULFATE ION, XENOBIOTIC REDUCTASE
著者Werther, T, Dobbek, H.
登録日2014-07-21
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
4UTL
DownloadVisualize
BU of 4utl by Molmil
XenA - reduced - Y183F variant in complex with coumarin
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, COUMARIN, SULFATE ION, ...
著者Werther, T, Dobbek, H.
登録日2014-07-21
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.229 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
6SG2
DownloadVisualize
BU of 6sg2 by Molmil
FeFe Hydrogenase from Desulfovibrio desulfuricans in Hinact state
分子名称: HydB, IRON/SULFUR CLUSTER, Periplasmic [Fe] hydrogenase large subunit, ...
著者Galle, L.M, Span, I.
登録日2019-08-02
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Caught in the H inact : Crystal Structure and Spectroscopy Reveal a Sulfur Bound to the Active Site of an O 2 -stable State of [FeFe] Hydrogenase.
Angew.Chem.Int.Ed.Engl., 59, 2020
7AIZ
DownloadVisualize
BU of 7aiz by Molmil
Vanadium nitrogenase VFe protein, high CO state
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-HYDROXY-3-CARBOXY-ADIPIC ACID, ...
著者Rohde, M, Einsle, O.
登録日2020-09-28
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Two ligand-binding sites in CO-reducing V nitrogenase reveal a general mechanistic principle.
Sci Adv, 7, 2021
7ODH
DownloadVisualize
BU of 7odh by Molmil
Crystal structure of the O2-tolerant MBH-P242C from Ralstonia eutropha in its as-isolated state
分子名称: CHLORIDE ION, FE4-S3 CLUSTER, IRON/SULFUR CLUSTER, ...
著者Schmidt, A, Kalms, J, Scheerer, P.
登録日2021-04-29
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Resonance Raman spectroscopic analysis of the iron-sulfur cluster redox chain of the Ralstonia eutropha membrane-bound [NiFe]-hydrogenase
J Raman Spectrosc, 2021
7ODG
DownloadVisualize
BU of 7odg by Molmil
Crystal structure of the O2-tolerant MBH-P242C from Ralstonia eutropha in its reduced state
分子名称: CHLORIDE ION, FE4-S3 CLUSTER, IRON/SULFUR CLUSTER, ...
著者Schmidt, A, Kalms, J, Scheerer, P.
登録日2021-04-29
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Resonance Raman spectroscopic analysis of the iron-sulfur cluster redox chain of the Ralstonia eutropha membrane-bound [NiFe]-hydrogenase
J Raman Spectrosc, 2021
5LNI
DownloadVisualize
BU of 5lni by Molmil
XenA - oxidized - Y183F variant in complex with 7-hydroxycoumarin
分子名称: 7-hydroxy-2H-chromen-2-one, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
著者Werther, T, Dobbek, H.
登録日2016-08-04
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.133 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
5LNJ
DownloadVisualize
BU of 5lnj by Molmil
XenA - reduced - Y183F variant in complex with 7-hydroxycoumarin
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 7-hydroxy-2H-chromen-2-one, NADH:flavin oxidoreductase, ...
著者Werther, T, Dobbek, H.
登録日2016-08-04
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
2VKR
DownloadVisualize
BU of 2vkr by Molmil
3Fe-4S, 4Fe-4S plus Zn Acidianus ambivalens ferredoxin
分子名称: FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ZINC ION, ...
著者Frazao, C, Aragao, D, Coelho, R, Leal, S.S, Gomes, C.M, Teixeira, M, Carrondo, M.A.
登録日2007-12-23
公開日2008-03-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystallographic analysis of the intact metal centres [3Fe-4S](1+/0) and [4Fe-4S](2+/1+) in a Zn(2+) -containing ferredoxin.
FEBS Lett., 582, 2008
8POW
DownloadVisualize
BU of 8pow by Molmil
Crystal Structure of the C19G variant of the membrane-bound [NiFe]-Hydrogenase from Cupriavidus necator in the air-oxidized state at 1.61 A Resolution.
分子名称: CHLORIDE ION, FE3-S4 CLUSTER, Fe4S4, ...
著者Kalms, J, Schmidt, A, Scheerer, P.
登録日2023-07-05
公開日2023-11-15
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Stepwise conversion of the Cys 6 [4Fe-3S] to a Cys 4 [4Fe-4S] cluster and its impact on the oxygen tolerance of [NiFe]-hydrogenase.
Chem Sci, 14, 2023
8POU
DownloadVisualize
BU of 8pou by Molmil
Crystal Structure of the C19G/C120G variant of the membrane-bound [NiFe]-Hydrogenase from Cupriavidus necator in the air-oxidized state at 1.65 A Resolution.
分子名称: CHLORIDE ION, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
著者Schmidt, A, Kalms, J, Scheerer, P.
登録日2023-07-05
公開日2023-11-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Stepwise conversion of the Cys 6 [4Fe-3S] to a Cys 4 [4Fe-4S] cluster and its impact on the oxygen tolerance of [NiFe]-hydrogenase.
Chem Sci, 14, 2023
8POV
DownloadVisualize
BU of 8pov by Molmil
Crystal Structure of the C19G/C120G variant of the membrane-bound [NiFe]-Hydrogenase from Cupriavidus necator in the H2-reduced state at 1.92 A Resolution.
分子名称: FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
著者Schmidt, A, Kalms, J, Scheerer, P.
登録日2023-07-05
公開日2023-11-01
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Stepwise conversion of the Cys 6 [4Fe-3S] to a Cys 4 [4Fe-4S] cluster and its impact on the oxygen tolerance of [NiFe]-hydrogenase.
Chem Sci, 14, 2023
4IUD
DownloadVisualize
BU of 4iud by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form with ascorbate - partly reduced state
分子名称: CHLORIDE ION, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
著者Hammer, M, Schmidt, A, Frielingsdorf, S, Fritsch, J, Lenz, O, Scheerer, P.
登録日2013-01-20
公開日2014-04-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Reversible [4Fe-3S] cluster morphing in an O2-tolerant [NiFe] hydrogenase.
Nat.Chem.Biol., 10, 2014
4IUC
DownloadVisualize
BU of 4iuc by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form - oxidized state 2
分子名称: CHLORIDE ION, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
著者Frielingsdorf, S, Schmidt, A, Fritsch, J, Lenz, O, Scheerer, P.
登録日2013-01-20
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Reversible [4Fe-3S] cluster morphing in an O2-tolerant [NiFe] hydrogenase.
Nat.Chem.Biol., 10, 2014
4IUB
DownloadVisualize
BU of 4iub by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form - oxidized state 1
分子名称: CHLORIDE ION, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
著者Frielingsdorf, S, Schmidt, A, Fritsch, J, Lenz, O, Scheerer, P.
登録日2013-01-20
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Reversible [4Fe-3S] cluster morphing in an O2-tolerant [NiFe] hydrogenase.
Nat.Chem.Biol., 10, 2014
4UTJ
DownloadVisualize
BU of 4utj by Molmil
XenA - oxidized - Y183F variant in complex with 8-hydroxycoumarin
分子名称: 8-HYDROXYCOUMARIN, FLAVIN MONONUCLEOTIDE, NADH:flavin oxidoreductase, ...
著者Werther, T, Dobbek, H.
登録日2014-07-21
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
4UTM
DownloadVisualize
BU of 4utm by Molmil
XenA - Reduced - Y183F variant in complex with 8-hydroxycoumarin
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 8-HYDROXYCOUMARIN, SULFATE ION, ...
著者Werther, T, Dobbek, H.
登録日2014-07-21
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
4UTH
DownloadVisualize
BU of 4uth by Molmil
XenA - oxidized - Y183F variant
分子名称: FLAVIN MONONUCLEOTIDE, NADH:flavin oxidoreductase, SULFATE ION
著者Werther, T, Dobbek, H.
登録日2014-07-21
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
4UTI
DownloadVisualize
BU of 4uti by Molmil
XenA - oxidized - Y183F variant in complex with coumarin
分子名称: COUMARIN, FLAVIN MONONUCLEOTIDE, NADH:flavin oxidoreductase, ...
著者Werther, T, Dobbek, H.
登録日2014-07-21
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.099 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon