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BU of 7ebl by Molmil

Bacterial STING in complex with c-di-GMP
分子名称:	9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), STING
著者	Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2021-03-10
公開日	2021-09-15
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.17 Å)
主引用文献	Crystal structure and functional implication of bacterial STING. Nat Commun, 13, 2022

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BU of 7ebd by Molmil

Bacterial STING in complex with c-di-GMP
分子名称:	9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ACETATE ION, TIR-like domain-containing protein
著者	Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2021-03-09
公開日	2021-09-15
最終更新日	2022-01-19
実験手法	X-RAY DIFFRACTION (2.25 Å)
主引用文献	Crystal structure and functional implication of bacterial STING. Nat Commun, 13, 2022

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BU of 7d4s by Molmil

apo-form cyclic trinucleotide synthase CdnD
分子名称:	Cyclic AMP-AMP-GMP synthase, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION
著者	Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
登録日	2020-09-24
公開日	2021-03-17
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.93 Å)
主引用文献	Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase. Nucleic Acids Res., 49, 2021

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BU of 7d4o by Molmil

cyclic trinucleotide synthase CdnD in complex with ATP and ADP
分子名称:	ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cyclic AMP-AMP-GMP synthase, ...
著者	Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
登録日	2020-09-24
公開日	2021-03-17
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.87 Å)
主引用文献	Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase. Nucleic Acids Res., 49, 2021

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BU of 7d4j by Molmil

ddATP complex of cyclic trinucleotide synthase CdnD
分子名称:	2',3'-dideoxyadenosine triphosphate, Cyclic AMP-AMP-GMP synthase, MAGNESIUM ION
著者	Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
登録日	2020-09-24
公開日	2021-03-17
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.09 Å)
主引用文献	Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase. Nucleic Acids Res., 49, 2021

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BU of 7d48 by Molmil

apo-form cyclic trinucleotide synthase CdnD
分子名称:	Cyclic AMP-AMP-GMP synthase, SODIUM ION
著者	Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
登録日	2020-09-23
公開日	2021-03-17
最終更新日	2024-03-27
実験手法	X-RAY DIFFRACTION (2.15 Å)
主引用文献	Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase. Nucleic Acids Res., 49, 2021

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BU of 7d4u by Molmil

ATP complex with double mutant cyclic trinucleotide synthase CdnD
分子名称:	ADENOSINE-5'-TRIPHOSPHATE, Cyclic AMP-AMP-GMP synthase
著者	Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
登録日	2020-09-24
公開日	2021-03-17
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.7 Å)
主引用文献	Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase. Nucleic Acids Res., 49, 2021

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BU of 4akf by Molmil

Crystal structure of VipD from Legionella pneumophila
分子名称:	VIPD
著者	Lee, K.-H, Ku, B, Oh, B.-H.
登録日	2012-02-22
公開日	2012-12-26
最終更新日	2024-05-08
実験手法	X-RAY DIFFRACTION (2.9 Å)
主引用文献	Vipd of Legionella Pneumophila Targets Activated Rab5 and Rab22 to Interfere with Endosomal Trafficking in Macrophages Plos Pathog., 8, 2012

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BU of 8hyk by Molmil

CD-NTase EfCdnE in complex with intermediate pppU[2'-5']p
分子名称:	EfCdnE, MAGNESIUM ION, [[(2R,3R,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
著者	Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2023-01-06
公開日	2023-07-05
最終更新日	2023-09-13
実験手法	X-RAY DIFFRACTION (2.021 Å)
主引用文献	Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases. Nat Commun, 14, 2023

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BU of 8hyn by Molmil

Bacterial STING from Riemerella anatipestifer
分子名称:	CD-NTase-associated protein 12, TETRAETHYLENE GLYCOL
著者	Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2023-01-07
公開日	2024-01-10
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (2.089 Å)
主引用文献	Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING. Nat Commun, 14, 2023

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BU of 8hwj by Molmil

Bacterial STING from Epilithonimonas lactis in complex with 3'3'-c-di-AMP
分子名称:	(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, CD-NTase-associated protein 12
著者	Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2022-12-30
公開日	2024-01-03
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (2.553 Å)
主引用文献	Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING. Nat Commun, 14, 2023

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BU of 8hwi by Molmil

Bacterial STING from Larkinella arboricola in complex with 3'3'-c-di-GMP
分子名称:	9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CD-NTase-associated protein 12
著者	Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2022-12-30
公開日	2024-01-03
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (2.73 Å)
主引用文献	Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING. Nat Commun, 14, 2023

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BU of 8hy8 by Molmil

Bacterial STING from Epilithonimonas lactis
分子名称:	CD-NTase-associated protein 12
著者	Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2023-01-06
公開日	2024-01-10
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (2.568 Å)
主引用文献	Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING. Nat Commun, 14, 2023

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BU of 8hy9 by Molmil

Bacterial STING from Riemerella anatipestifer in complex with 3'3'-c-di-GMP
分子名称:	9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, CD-NTase-associated protein 12
著者	Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2023-01-06
公開日	2024-01-10
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.462 Å)
主引用文献	Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING. Nat Commun, 14, 2023

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BU of 8jsf by Molmil

Crystal structure of a cytidylate cyclase from multidrug-resistant bacterium Elizabethkingia anopheles
分子名称:	cytidylate cyclase
著者	Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2023-06-20
公開日	2024-07-03
最終更新日	2024-07-17
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Structural and functional characterization of cyclic pyrimidine-regulated anti-phage system. Nat Commun, 15, 2024

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BU of 8jsj by Molmil

Crystal structure of an N-terminal cyclic nucleotide-binding domain of a PycTIR from Novosphingobium pentaromativorans
分子名称:	PycTIR
著者	Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2023-06-20
公開日	2024-07-03
最終更新日	2024-07-17
実験手法	X-RAY DIFFRACTION (2.858 Å)
主引用文献	Structural and functional characterization of cyclic pyrimidine-regulated anti-phage system. Nat Commun, 15, 2024

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BU of 8jsk by Molmil

Crystal structure of an N-terminal cyclic nucleotide-binding domain of a PycTIR from Pseudovibrio sp. in complex with cUMP
分子名称:	PycTIR, Uridine-3',5'-cyclic monophosphate
著者	Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2023-06-20
公開日	2024-07-03
最終更新日	2024-07-17
実験手法	X-RAY DIFFRACTION (2.401 Å)
主引用文献	Structural and functional characterization of cyclic pyrimidine-regulated anti-phage system. Nat Commun, 15, 2024

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BU of 8jsz by Molmil

Crystal structure of a uridylate cyclase from Anabaena sp.
分子名称:	ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者	Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日	2023-06-20
公開日	2024-07-03
最終更新日	2024-07-17
実験手法	X-RAY DIFFRACTION (1.83 Å)
主引用文献	Structural and functional characterization of cyclic pyrimidine-regulated anti-phage system. Nat Commun, 15, 2024

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BU of 7yib by Molmil

Crystal structure of wild-type Cap4 SAVED domain-containing receptor from Enterobacter cloacae
分子名称:	CD-NTase-associated protein 4, CHLORIDE ION
著者	Ko, T.-P, Yang, C.-S, Hou, M.-H, Wang, Y.-C, Chen, Y.
登録日	2022-07-15
公開日	2023-05-31
実験手法	X-RAY DIFFRACTION (2.18 Å)
主引用文献	Specific recognition of cyclic oligonucleotides by Cap4 for phage infection. Int.J.Biol.Macromol., 237, 2023

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BU of 7yia by Molmil

Crystal structure of K74A mutant of Cap4 SAVED domain-containing receptor from Enterobacter cloacae
分子名称:	CD-NTase-associated protein 4, MAGNESIUM ION
著者	Ko, T.-P, Yang, C.-S, Hou, M.-H, Wang, Y.-C, Chen, Y.
登録日	2022-07-15
公開日	2023-05-31
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.428 Å)
主引用文献	Specific recognition of cyclic oligonucleotides by Cap4 for phage infection. Int.J.Biol.Macromol., 237, 2023

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