Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6R86
DownloadVisualize
BU of 6r86 by Molmil
Yeast Vms1-60S ribosomal subunit complex (post-state)
分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Su, T, Izawa, T, Cheng, J, Yamashita, Y, Berninghausen, O, Inada, T, Neupert, W, Beckmann, R.
登録日2019-03-31
公開日2019-07-31
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure and function of Vms1 and Arb1 in RQC and mitochondrial proteome homeostasis.
Nature, 570, 2019
6R87
DownloadVisualize
BU of 6r87 by Molmil
Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)
分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Su, T, Izawa, T, Cheng, J, Yamashita, Y, Berninghausen, O, Inada, T, Neupert, W, Beckmann, R.
登録日2019-03-31
公開日2019-06-26
最終更新日2019-07-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure and function of Vms1 and Arb1 in RQC and mitochondrial proteome homeostasis.
Nature, 570, 2019
6R84
DownloadVisualize
BU of 6r84 by Molmil
Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)
分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Su, T, Izawa, T, Cheng, J, Yamashita, Y, Berninghausen, O, Inada, T, Neupert, W, Beckmann, R.
登録日2019-03-31
公開日2019-06-26
最終更新日2019-07-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure and function of Vms1 and Arb1 in RQC and mitochondrial proteome homeostasis.
Nature, 570, 2019
7OJ0
DownloadVisualize
BU of 7oj0 by Molmil
Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Su, T, Kudva, R, Becker, T, Berninghausen, O, Heijne, G, Cheng, J, Beckmann, R.
登録日2021-05-13
公開日2021-09-15
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis of l-tryptophan-dependent inhibition of release factor 2 by the TnaC arrest peptide.
Nucleic Acids Res., 49, 2021
7OIZ
DownloadVisualize
BU of 7oiz by Molmil
Cryo-EM structure of 70S ribosome stalled with TnaC peptide
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Su, T, Kudva, R, Becker, T, Berninghausen, O, Heijne, G, Cheng, J, Beckmann, R.
登録日2021-05-13
公開日2021-09-15
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of l-tryptophan-dependent inhibition of release factor 2 by the TnaC arrest peptide.
Nucleic Acids Res., 49, 2021
5NWY
DownloadVisualize
BU of 5nwy by Molmil
2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Su, T, Cheng, J, Sohmen, D, Hedman, R, Berninghausen, O, von Heijne, G, Wilson, D.N, Beckmann, R.
登録日2017-05-08
公開日2017-07-19
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献The force-sensing peptide VemP employs extreme compaction and secondary structure formation to induce ribosomal stalling.
Elife, 6, 2017
4WXM
DownloadVisualize
BU of 4wxm by Molmil
FleQ REC domain from Pseudomonas aeruginosa PAO1
分子名称: Transcriptional regulator FleQ
著者Su, T, Liu, S, Gu, L.
登録日2014-11-14
公開日2015-09-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The REC domain mediated dimerization is critical for FleQ from Pseudomonas aeruginosa to function as a c-di-GMP receptor and flagella gene regulator
J.Struct.Biol., 192, 2015
4ZN2
DownloadVisualize
BU of 4zn2 by Molmil
Glycosyl hydrolase from Pseudomonas aeruginosa
分子名称: PslG
著者Su, T, Liu, S, Gu, L.
登録日2015-05-04
公開日2016-01-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献PslG, a self-produced glycosyl hydrolase, triggers biofilm disassembly by disrupting exopolysaccharide matrix
Cell Res., 25, 2015
5XKC
DownloadVisualize
BU of 5xkc by Molmil
Crystal structure of dibenzothiophene sulfone monooxygenase BdsA at 2.2 angstrome
分子名称: Dibenzothiophene desulfurization enzyme A
著者Gu, L, Su, T, Liu, S, Su, J.
登録日2017-05-07
公開日2018-05-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.209 Å)
主引用文献Structural and Biochemical Characterization of BdsA fromBacillus subtilisWU-S2B, a Key Enzyme in the "4S" Desulfurization Pathway.
Front Microbiol, 9, 2018
5XKD
DownloadVisualize
BU of 5xkd by Molmil
Crystal structure of dibenzothiophene sulfone monooxygenase BdsA in complex with FMN at 2.4 angstrom
分子名称: Dibenzothiophene desulfurization enzyme A, FLAVIN MONONUCLEOTIDE
著者Gu, L, Su, T, Liu, S, Su, J.
登録日2017-05-07
公開日2018-05-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.393 Å)
主引用文献Structural and Biochemical Characterization of BdsA fromBacillus subtilisWU-S2B, a Key Enzyme in the "4S" Desulfurization Pathway.
Front Microbiol, 9, 2018
6I0Y
DownloadVisualize
BU of 6i0y by Molmil
TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel
分子名称: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
著者Su, T, Kudva, R, von Heijne, G, Beckmann, R.
登録日2018-10-26
公開日2018-12-05
最終更新日2019-01-23
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Folding pathway of an Ig domain is conserved on and off the ribosome.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4ZXD
DownloadVisualize
BU of 4zxd by Molmil
Crystal Structure of hydroquinone 1,2-dioxygenase PnpCD
分子名称: Hydroquinone dioxygenase large subunit, Hydroquinone dioxygenase small subunit
著者Liu, S, Su, T, Zhang, C, Gu, L.
登録日2015-05-20
公開日2015-09-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.052 Å)
主引用文献Crystal Structure of PnpCD, a Two-subunit Hydroquinone 1,2-Dioxygenase, Reveals a Novel Structural Class of Fe2+-dependent Dioxygenases.
J.Biol.Chem., 290, 2015
4ZXC
DownloadVisualize
BU of 4zxc by Molmil
Crystal Structure of hydroquinone 1,2-dioxygenase PnpCD in complex with Fe3+
分子名称: FE (III) ION, Hydroquinone dioxygenase large subunit, Hydroquinone dioxygenase small subunit
著者Liu, S, Su, T, Zhang, C, Gu, L.
登録日2015-05-20
公開日2015-09-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Crystal Structure of PnpCD, a Two-subunit Hydroquinone 1,2-Dioxygenase, Reveals a Novel Structural Class of Fe2+-dependent Dioxygenases.
J.Biol.Chem., 290, 2015
4ZXA
DownloadVisualize
BU of 4zxa by Molmil
Crystal Structure of hydroquinone 1,2-dioxygenase PnpCD in complex with Cd2+ and 4-hydroxybenzonitrile
分子名称: 4-hydroxybenzonitrile, CADMIUM ION, Hydroquinone dioxygenase large subunit, ...
著者Liu, S, Su, T, Zhang, C, Gu, L.
登録日2015-05-20
公開日2015-09-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.488 Å)
主引用文献Crystal Structure of PnpCD, a Two-subunit Hydroquinone 1,2-Dioxygenase, Reveals a Novel Structural Class of Fe2+-dependent Dioxygenases.
J.Biol.Chem., 290, 2015
6J66
DownloadVisualize
BU of 6j66 by Molmil
Chondroitin sulfate/dermatan sulfate endolytic 4-O-sulfatase
分子名称: CALCIUM ION, Chondroitin sulfate/dermatan sulfate 4-O-endosulfatase protein
著者Gu, L, Li, F, Su, T, Wang, S.
登録日2019-01-14
公開日2019-07-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.953 Å)
主引用文献Comparative Study of Two Chondroitin Sulfate/Dermatan Sulfate 4-O-Sulfatases With High Identity.
Front Microbiol, 10, 2019
7P3K
DownloadVisualize
BU of 7p3k by Molmil
Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Buschauer, R, Komar, T, Becker, T, Berninghausen, O, Cheng, J, Beckmann, R.
登録日2021-07-08
公開日2021-10-27
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of l-tryptophan-dependent inhibition of release factor 2 by the TnaC arrest peptide.
Nucleic Acids Res., 49, 2021
4DOY
DownloadVisualize
BU of 4doy by Molmil
Crystal structure of Dibenzothiophene desulfurization enzyme C
分子名称: Dibenzothiophene desulfurization enzyme C, GLYCEROL
著者Liu, S, Zhang, C, Zhu, D, Gu, L.
登録日2012-02-12
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.789 Å)
主引用文献Crystal structure of DszC from Rhodococcus sp. XP at 1.79 angstrom
Proteins, 82, 2014
6PLG
DownloadVisualize
BU of 6plg by Molmil
Crystal structure of human PHGDH complexed with Compound 15
分子名称: (2S)-(4-{3-[(4,5-dichloro-1-methyl-1H-indole-2-carbonyl)amino]oxetan-3-yl}phenyl)(pyridin-3-yl)acetic acid, D-3-phosphoglycerate dehydrogenase, D-MALATE
著者Olland, A, Lakshminarasimhan, D, White, A, Suto, R.K.
登録日2019-06-30
公開日2019-07-24
最終更新日2019-09-04
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Inhibition of 3-phosphoglycerate dehydrogenase (PHGDH) by indole amides abrogates de novo serine synthesis in cancer cells.
Bioorg.Med.Chem.Lett., 29, 2019
6PLF
DownloadVisualize
BU of 6plf by Molmil
Crystal structure of human PHGDH complexed with Compound 1
分子名称: 1,2-ETHANEDIOL, 4-{(1S)-1-[(5-chloro-6-{[(5S)-2-oxo-1,3-oxazolidin-5-yl]methoxy}-1H-indole-2-carbonyl)amino]-2-hydroxyethyl}benzoic acid, D-3-phosphoglycerate dehydrogenase
著者Olland, A, Lakshminarasimhan, D, White, A, Suto, R.K.
登録日2019-06-30
公開日2019-07-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Inhibition of 3-phosphoglycerate dehydrogenase (PHGDH) by indole amides abrogates de novo serine synthesis in cancer cells.
Bioorg.Med.Chem.Lett., 29, 2019

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon