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1NIZ
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BU of 1niz by Molmil
NMR structure of a V3 (MN isolate) peptide bound to 447-52D, a human HIV-1 neutralizing antibody
分子名称: Exterior membrane glycoprotein(GP120)
著者Sharon, M, Kessler, N, Levy, R, Zolla-Pazner, S, Gorlach, M, Anglister, J.
登録日2002-12-30
公開日2003-02-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Alternative Conformations of HIV-1 V3 Loops Mimic beta Hairpins in Chemokines, Suggesting a Mechanism for Coreceptor Selectivity.
Structure, 11, 2003
1NJ0
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BU of 1nj0 by Molmil
NMR structure of a V3 (MN isolate) peptide bound to 447-52D, a human HIV-1 neutralizing antibody
分子名称: Exterior membrane glycoprotein(GP120)
著者Sharon, M, Kessler, N, Levy, R, Zolla-Pazner, S, Gorlach, M, Anglister, J.
登録日2002-12-30
公開日2003-02-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Alternative Conformations of HIV-1 V3 Loops Mimic beta Hairpins in Chemokines, Suggesting a Mechanism for Coreceptor Selectivity.
Structure, 11, 2003
6FUY
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BU of 6fuy by Molmil
Crystal structure of human full-length vinculin-T12-A974K (residues 1-1066)
分子名称: CALCIUM ION, Vinculin
著者Chorev, D.S, Volberg, T, Livne, A, Eisenstein, M, Martins, B, Kam, Z, Jockusch, B.M, Medalia, O, Sharon, M, Geiger, B.
登録日2018-02-28
公開日2018-03-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Conformational states during vinculin unlocking differentially regulate focal adhesion properties.
Sci Rep, 8, 2018
2ESX
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BU of 2esx by Molmil
The structure of the V3 region within gp120 of JR-FL HIV-1 strain (minimized average structure)
分子名称: Envelope polyprotein GP160
著者Rosen, O, Sharon, M, Samson, A.O, Quadt, S.R, Anglister, J.
登録日2005-10-27
公開日2006-09-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Molecular switch for alternative conformations of the HIV-1 V3 region: Implications for phenotype conversion.
Proc.Natl.Acad.Sci.Usa, 13, 2006
2ESZ
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BU of 2esz by Molmil
The structure of the V3 region within gp120 of JR-FL HIV-1 strain (ensemble)
分子名称: Envelope polyprotein GP160
著者Rosen, O, Sharon, M, Samson, A.O, Quadt, S.R, Anglister, J.
登録日2005-10-27
公開日2006-09-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Molecular switch for alternative conformations of the HIV-1 V3 region: Implications for phenotype conversion.
Proc.Natl.Acad.Sci.Usa, 13, 2006
6GC2
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BU of 6gc2 by Molmil
AbLIFT: Antibody stability and affinity optimization by computational design of the variable light-heavy chain interface
分子名称: Heavy chain, Light Chain
著者Warszawski, S, Katz, A, Khmelnitsky, L, Ben Nissan, G, Javitt, G, Dym, O, Unger, T, Knop, O, Diskin, R, Albeck, S, Fass, D, Sharon, M, Fleishman, S.J.
登録日2018-04-17
公開日2019-05-01
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Optimizing antibody affinity and stability by the automated design of the variable light-heavy chain interfaces.
Plos Comput.Biol., 15, 2019
1U6V
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BU of 1u6v by Molmil
NMR structure of a V3 (IIIB isolate) peptide bound to 447-52D, a human HIV-1 neutralizing antibody
分子名称: V3 peptide
著者Rosen, O, Chill, J, Sharon, M, Kessler, N, Mester, B, Zolla-Pazner, S, Anglister, J.
登録日2004-08-02
公開日2005-04-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Induced fit in HIV-neutralizing antibody complexes: evidence for alternative conformations of the gp120 V3 loop and the molecular basis for broad neutralization.
Biochemistry, 44, 2005
3OGM
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BU of 3ogm by Molmil
Structure of COI1-ASK1 in complex with coronatine and the JAZ1 degron
分子名称: (1S,2S)-2-ethyl-1-({[(3aS,4S,6R,7aS)-6-ethyl-1-oxooctahydro-1H-inden-4-yl]carbonyl}amino)cyclopropanecarboxylic acid, Coronatine-insensitive protein 1, JAZ1 degron peptide, ...
著者Sheard, L.B, Tan, X, Mao, H, Withers, J, Ben-Nissan, G, Hinds, T.R, Hsu, F, Sharon, M, Browse, J, He, S.Y, Rizo, J, Howe, G.A, Zheng, N.
登録日2010-08-17
公開日2010-10-13
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor.
Nature, 468, 2010
3OGL
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BU of 3ogl by Molmil
Structure of COI1-ASK1 in complex with JA-isoleucine and the JAZ1 degron
分子名称: Coronatine-insensitive protein 1, JAZ1 incomplete degron peptide, N-({(1R,2S)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetyl)-L-isoleucine, ...
著者Sheard, L.B, Tan, X, Mao, H, Withers, J, Ben-Nissan, G, Hinds, T.R, Hsu, F, Sharon, M, Browse, J, He, S.Y, Rizo, J, Howe, G.A, Zheng, N.
登録日2010-08-17
公開日2010-10-13
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor.
Nature, 468, 2010
3OGK
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BU of 3ogk by Molmil
Structure of COI1-ASK1 in complex with coronatine and an incomplete JAZ1 degron
分子名称: (1S,2S)-2-ethyl-1-({[(3aS,4S,6R,7aS)-6-ethyl-1-oxooctahydro-1H-inden-4-yl]carbonyl}amino)cyclopropanecarboxylic acid, Coronatine-insensitive protein 1, JAZ1 incomplete degron peptide, ...
著者Sheard, L.B, Tan, X, Mao, H, Withers, J, Ben-Nissan, G, Hinds, T.R, Hsu, F, Sharon, M, Browse, J, He, S.Y, Rizo, J, Howe, G.A, Zheng, N.
登録日2010-08-16
公開日2010-10-13
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor.
Nature, 468, 2010
1U6U
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BU of 1u6u by Molmil
NMR structure of a V3 (IIIB isolate) peptide bound to 447-52D, a human HIV-1 neutralizing antibody
分子名称: V3 peptide
著者Rosen, O, Chill, J, Sharon, M, Kessler, N, Mester, B, Zolla-Pazner, S, Anglister, J.
登録日2004-08-02
公開日2005-04-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Induced fit in HIV-neutralizing antibody complexes: evidence for alternative conformations of the gp120 V3 loop and the molecular basis for broad neutralization.
Biochemistry, 44, 2005
2P1P
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BU of 2p1p by Molmil
Mechanism of Auxin Perception by the TIR1 ubiquitin ligase
分子名称: 1H-INDOL-3-YLACETIC ACID, INOSITOL HEXAKISPHOSPHATE, SKP1-like protein 1A, ...
著者Tan, X, Calderon-Villalobos, L.I.A, Sharon, M, Robinson, C.V, Estelle, M, Zheng, N.
登録日2007-03-06
公開日2007-04-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Mechanism of auxin perception by the TIR1 ubiquitin ligase
Nature, 446, 2007
2P1N
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BU of 2p1n by Molmil
Mechanism of Auxin Perception by the TIR1 Ubiqutin Ligase
分子名称: (2,4-DICHLOROPHENOXY)ACETIC ACID, Auxin-responsive protein IAA7, INOSITOL HEXAKISPHOSPHATE, ...
著者Tan, X, Calderon-Villalobos, L.I.A, Sharon, M, Robinson, C.V, Estelle, M, Zheng, C, Zheng, N.
登録日2007-03-06
公開日2007-04-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanism of auxin perception by the TIR1 ubiquitin ligase
Nature, 446, 2007
2P1O
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BU of 2p1o by Molmil
Mechanism of Auxin Perception by the TIR1 ubiquitin ligase
分子名称: Auxin-responsive protein IAA7, INOSITOL HEXAKISPHOSPHATE, NAPHTHALEN-1-YL-ACETIC ACID, ...
著者Tan, X, Calderon-Villalobos, L.I.A, Sharon, M, Robinson, C.V, Estelle, M, Zheng, N.
登録日2007-03-06
公開日2007-04-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism of auxin perception by the TIR1 ubiquitin ligase
Nature, 446, 2007
2P1M
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BU of 2p1m by Molmil
TIR1-ASK1 complex structure
分子名称: INOSITOL HEXAKISPHOSPHATE, SKP1-like protein 1A, TRANSPORT INHIBITOR RESPONSE 1 protein
著者Tan, X, Calderon-Villalobos, L.I.A, Sharon, M, Robinson, C.V, Estelle, M, Zheng, N.
登録日2007-03-05
公開日2007-04-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanism of auxin perception by the TIR1 ubiquitin ligase
Nature, 446, 2007
2P1Q
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BU of 2p1q by Molmil
Mechanism of Auxin Perception by the TIR1 ubiquitin ligase
分子名称: 1H-INDOL-3-YLACETIC ACID, Auxin-responsive protein IAA7, INOSITOL HEXAKISPHOSPHATE, ...
著者Tan, X, Calderon-Villalobos, L.I.A, Sharon, M, Robinson, C.V, Estelle, M, Zheng, N.
登録日2007-03-06
公開日2007-04-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Mechanism of auxin perception by the TIR1 ubiquitin ligase.
Nature, 446, 2007
6TU3
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BU of 6tu3 by Molmil
Rat 20S proteasome
分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
著者Deshmukh, F.K, Polkinghorn, C.R, Elad, N, Sharon, M.
登録日2020-01-02
公開日2020-05-13
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Comparative Structural Analysis of 20S Proteasome Ortholog Protein Complexes by Native Mass Spectrometry.
Acs Cent.Sci., 6, 2020
3KIH
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BU of 3kih by Molmil
The crystal structures of two fragments truncated from 5-bladed beta-propeller lectin, tachylectin-2 (Lib2-D2-15)
分子名称: 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone, 5-bladed beta-propeller lectin
著者Dym, O, Tawfik, D.S, Yadid, I, Israel Structural Proteomics Center (ISPC)
登録日2009-11-02
公開日2010-04-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Metamorphic proteins mediate evolutionary transitions of structure
Proc.Natl.Acad.Sci.USA, 107, 2010
3KIF
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BU of 3kif by Molmil
The crystal structures of two fragments truncated from 5-bladed beta-propeller lectin, tachylectin-2 (Lib1-B7-18 and Lib2-D2-15)
分子名称: 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone, 5-bladed beta-propeller lectin, SULFATE ION
著者Dym, O, Tawfik, D.S, Yadid, I, Israel Structural Proteomics Center (ISPC)
登録日2009-11-02
公開日2010-04-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Metamorphic proteins mediate evolutionary transitions of structure
Proc.Natl.Acad.Sci.USA, 107, 2010
2H6J
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BU of 2h6j by Molmil
Crystal Structure of the Beta F145A Rhodococcus Proteasome
分子名称: Proteasome alpha-type subunit 1, Proteasome beta-type subunit 1
著者Kwon, Y.D.
登録日2006-05-31
公開日2006-08-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Proteasome assembly triggers a switch required for active-site maturation.
Structure, 14, 2006
6C2V
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BU of 6c2v by Molmil
Solution structure of a phosphate-loop protein
分子名称: phosphate-loop protein
著者Yang, F, Yang, W, Lin, Y.R, Romero Romero, M.L, Tawfik, D, Baker, D, Varani, G.
登録日2018-01-09
公開日2018-11-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Simple yet functional phosphate-loop proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6C2U
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BU of 6c2u by Molmil
Solution structure of a phosphate-loop protein
分子名称: phosphate-loop protein
著者Yang, F, Yang, W, Lin, Y.R, Romero Romero, M.L, Tawfik, D, Baker, D, Varani, G.
登録日2018-01-09
公開日2018-11-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Simple yet functional phosphate-loop proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4RAP
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BU of 4rap by Molmil
Crystal structure of bacterial iron-containing dodecameric glycosyltransferase TibC from enterotoxigenic E.coli H10407
分子名称: 1,2-ETHANEDIOL, FE (III) ION, Glycosyltransferase TibC
著者Yao, Q, Lu, Q, Xu, Y, Shao, F.
登録日2014-09-10
公開日2014-10-29
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.881 Å)
主引用文献A structural mechanism for bacterial autotransporter glycosylation by a dodecameric heptosyltransferase family.
Elife, 3, 2014
4Q1Q
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BU of 4q1q by Molmil
Crystal structure of TibC-catalyzed hyper-glycosylated TibA55-350 fragment
分子名称: Adhesin/invasin TibA autotransporter, D-glycero-alpha-D-manno-heptopyranose
著者Yao, Q, Lu, Q, Shao, F.
登録日2014-04-04
公開日2014-09-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献An iron-containing dodecameric heptosyltransferase family modifies bacterial autotransporters in pathogenesis
Cell Host Microbe, 16, 2014
8P6U
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BU of 8p6u by Molmil
Human carbonic anhydrase II containing 5-fluorotryptophanes
分子名称: BENZOIC ACID, Carbonic anhydrase 2, MERCURIBENZOIC ACID, ...
著者Pham, L.B.T, Costantino, A, Barbieri, L, Calderone, V, Luchinat, E, Banci, L.
登録日2023-05-30
公開日2024-03-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Controlling the incorporation of fluorinated amino acids in human cells and its structural impact.
Protein Sci., 33, 2024

 

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