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4V61
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BU of 4v61 by Molmil
Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.
分子名称: 16S rRNA, 23S rRNA, 4.8S rRNA, ...
著者Sharma, M.R, Wilson, D.N, Datta, P.P, Barat, C, Schluenzen, F, Fucini, P, Agrawal, R.K.
登録日2007-11-09
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (9.4 Å)
主引用文献Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins
Proc.Natl.Acad.Sci.Usa, 104, 2007
8FMW
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BU of 8fmw by Molmil
The structure of a hibernating ribosome in the Lyme disease pathogen
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Sharma, M.R, Manjari, S.R, Agrawal, E.K, Keshavan, P, Koripella, R.K, Majumdar, S, Marcinkiewicz, A.L, Lin, Y.P, Agrawal, R.K, Banavali, N.K.
登録日2022-12-25
公開日2023-11-08
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献The structure of a hibernating ribosome in a Lyme disease pathogen.
Nat Commun, 14, 2023
8FN2
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BU of 8fn2 by Molmil
The structure of a 50S ribosomal subunit in the Lyme disease pathogen Borreliella burgdorferi
分子名称: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
著者Sharma, M.R, Manjari, S.R, Agrawal, E.K, Keshavan, P, Koripella, R.K, Majumdar, S, Marcinkiewicz, A.L, Lin, Y.P, Agrawal, R.K, Banavali, N.K.
登録日2022-12-26
公開日2023-11-08
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The structure of a hibernating ribosome in a Lyme disease pathogen.
Nat Commun, 14, 2023
3IY9
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BU of 3iy9 by Molmil
Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit Model
分子名称: 39S ribosomal protein L11, mitochondrial, 39S ribosomal protein L16, ...
著者Sharma, M.R, Booth, T.M, Simpson, L, Maslov, D.A, Agrawal, R.K.
登録日2009-04-20
公開日2009-07-07
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (14.1 Å)
主引用文献Structure of a mitochondrial ribosome with minimal RNA
Proc.Natl.Acad.Sci.USA, 106, 2009
1X18
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BU of 1x18 by Molmil
Contact sites of ERA GTPase on the THERMUS THERMOPHILUS 30S SUBUNIT
分子名称: 30S ribosomal protein S11, 30S ribosomal protein S18, 30S ribosomal protein S2, ...
著者Sharma, M.R, Barat, C, Agrawal, R.K.
登録日2005-04-02
公開日2005-05-17
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (13.5 Å)
主引用文献Interaction of Era with the 30S Ribosomal Subunit Implications for 30S Subunit Assembly
Mol.Cell, 18, 2005
1X1L
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BU of 1x1l by Molmil
Interaction of ERA,a GTPase protein, with the 3'minor domain of the 16S rRNA within the THERMUS THERMOPHILUS 30S subunit.
分子名称: GTP-binding protein era, RNA (130-MER)
著者Sharma, M.R, Barat, C, Agrawal, R.K.
登録日2005-04-06
公開日2005-05-17
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (13.5 Å)
主引用文献Interaction of Era with the 30S Ribosomal Subunit Implications for 30S Subunit Assembly
Mol.Cell, 18, 2005
3IY8
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BU of 3iy8 by Molmil
Leishmania tarentolae Mitonchondrial Ribosome small subunit
分子名称: 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S15, ...
著者Sharma, M.R, Booth, T.M, Simpson, L, Maslov, D.A, Agrawal, R.K.
登録日2009-04-16
公開日2009-07-07
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (14.1 Å)
主引用文献Structure of a mitochondrial ribosome with minimal RNA
Proc.Natl.Acad.Sci.USA, 106, 2009
6NU3
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BU of 6nu3 by Molmil
Structural insights into unique features of the human mitochondrial ribosome recycling
分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
著者Sharma, M.R, Koripella, R.K, Agrawal, R.K.
登録日2019-01-30
公開日2019-04-17
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural insights into unique features of the human mitochondrial ribosome recycling.
Proc.Natl.Acad.Sci.USA, 116, 2019
6NU2
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BU of 6nu2 by Molmil
Structural insights into unique features of the human mitochondrial ribosome recycling
分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
著者Sharma, M.R, Koripella, R.K, Agrawal, R.K.
登録日2019-01-30
公開日2019-04-17
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insights into unique features of the human mitochondrial ribosome recycling.
Proc.Natl.Acad.Sci.USA, 116, 2019
6DZP
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BU of 6dzp by Molmil
Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit
分子名称: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
著者Sharma, M.R, Li, Y, Korripella, R, Yang, Y, Kaushal, P.S, Lin, Q, Wade, J.T, Gray, A.G, Derbyshire, K.M, Agrawal, R.K, Ojha, A.
登録日2018-07-05
公開日2018-10-03
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Zinc depletion induces ribosome hibernation in mycobacteria.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6DZK
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BU of 6dzk by Molmil
Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Sharma, M.R, Li, Y, Korripella, R, Yang, Y, Kaushal, P.S, Lin, Q, Wade, J.T, Gray, A.G, Derbyshire, K.M, Agrawal, R.K, Ojha, A.
登録日2018-07-05
公開日2018-09-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Zinc depletion induces ribosome hibernation in mycobacteria.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6DZI
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BU of 6dzi by Molmil
Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex
分子名称: 16S rRNA, 23 S rRNA (3119-MER), 30S ribosomal protein S10, ...
著者Sharma, M.R, Li, Y, Korripella, R, Yang, Y, Kaushal, P.S, Lin, Q, Wade, J.T, Gray, A.G, Derbyshire, K.M, Agrawal, R.K, Ojha, A.
登録日2018-07-05
公開日2018-09-26
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Zinc depletion induces ribosome hibernation in mycobacteria.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6VLZ
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BU of 6vlz by Molmil
Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
分子名称: 12s rRNA, 16s rRNA, 28S ribosomal protein S10, ...
著者Sharma, M.R, Koripella, R.K, Agrawal, R.K.
登録日2020-01-27
公開日2020-08-05
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Structures of the human mitochondrial ribosome bound to EF-G1 reveal distinct features of mitochondrial translation elongation.
Nat Commun, 11, 2020
6VMI
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BU of 6vmi by Molmil
Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)
分子名称: 12s rRNA, 16s rRNA, 28S ribosomal protein S10, ...
著者Sharma, M.R, Koripella, R.K, Agrawal, R.K.
登録日2020-01-28
公開日2020-08-05
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Structures of the human mitochondrial ribosome bound to EF-G1 reveal distinct features of mitochondrial translation elongation.
Nat Commun, 11, 2020
8FR8
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BU of 8fr8 by Molmil
Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
分子名称: 16S rRNA (1511-MER), 23S rRNA (3119-MER), 30S ribosomal protein S10, ...
著者Majumdar, S, Sharma, M.R, Manjari, S.R, Banavali, N.K, Agrawal, R.K.
登録日2023-01-06
公開日2023-05-17
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Starvation sensing by mycobacterial RelA/SpoT homologue through constitutive surveillance of translation.
Proc.Natl.Acad.Sci.USA, 120, 2023
2R1G
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BU of 2r1g by Molmil
Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex
分子名称: 16S RIBOSOMAL RNA HELIX 1, 16S RIBOSOMAL RNA HELIX 18, 16S RIBOSOMAL RNA HELIX 27, ...
著者Datta, P.P, Wilson, D.N, Kawazoe, M, Swami, N.K, Kaminishi, T, Sharma, M.R, Booth, T.M, Takemoto, C, Fucini, P, Yokoyama, S, Agrawal, R.K.
登録日2007-08-22
公開日2008-03-18
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (12.5 Å)
主引用文献Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
2R1C
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BU of 2r1c by Molmil
Coordinates of the thermus thermophilus ribosome binding factor A (RbfA) homology model as fitted into the CRYO-EM map of a 30S-RBFA complex
分子名称: Ribosome-binding factor A
著者Datta, P.P, Wilson, D.N, Kawazoe, M, Swami, N.K, Kaminishi, T, Sharma, M.R, Booth, T.M, Takemoto, C, Fucini, P, Yokoyama, S, Agrawal, R.K.
登録日2007-08-22
公開日2008-03-18
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (12.5 Å)
主引用文献Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
2BCW
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BU of 2bcw by Molmil
Coordinates of the N-terminal domain of ribosomal protein L11,C-terminal domain of ribosomal protein L7/L12 and a portion of the G' domain of elongation factor G, as fitted into cryo-em map of an Escherichia coli 70S*EF-G*GDP*fusidic acid complex
分子名称: 50S ribosomal protein L11, 50S ribosomal protein L7/L12, Elongation factor G
著者Datta, P.P, Sharma, M.R, Qi, L, Frank, J, Agrawal, R.K.
登録日2005-10-19
公開日2005-12-20
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (11.2 Å)
主引用文献Interaction of the G' Domain of Elongation Factor G and the C-Terminal Domain of Ribosomal Protein L7/L12 during Translocation as Revealed by Cryo-EM.
Mol.Cell, 20, 2005
3JD5
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BU of 3jd5 by Molmil
Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome
分子名称: 28S ribosomal RNA, mitochondial, 28S ribosomal protein S10, ...
著者Kaushal, P.S, Sharma, M.R, Booth, T.M, Haque, E.M, Tung, C.S, Sanbonmatsu, K.Y, Spremulli, L.L, Agrawal, R.K.
登録日2016-04-08
公開日2016-07-13
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome.
Proc.Natl.Acad.Sci.USA, 111, 2014
2FTC
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BU of 2ftc by Molmil
Structural Model for the Large Subunit of the Mammalian Mitochondrial Ribosome
分子名称: 39S ribosomal protein L11, mitochondrial, 39S ribosomal protein L12, ...
著者Mears, J.A, Sharma, M.R, Gutell, R.R, Richardson, P.E, Agrawal, R.K, Harvey, S.C.
登録日2006-01-24
公開日2006-04-11
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12.1 Å)
主引用文献A Structural Model for the Large Subunit of the Mammalian Mitochondrial Ribosome
J.Mol.Biol., 358, 2006
1T1M
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BU of 1t1m by Molmil
Binding position of ribosome recycling factor (RRF) on the E. coli 70S ribosome
分子名称: 42-mer fragment of double helix from 16S rRNA, dodecamer fragment of double helix from 23S rRNA, ribosome recycling factor
著者Agrawal, R.K, Sharma, M.R, Kiel, M.C, Hirokawa, G, Booth, T.M, Spahn, C.M, Grassucci, R.A, Kaji, A, Frank, J.
登録日2004-04-16
公開日2004-06-15
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: Functional implications
Proc.Natl.Acad.Sci.USA, 101, 2004
1T1O
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BU of 1t1o by Molmil
Components of the control 70S ribosome to provide reference for the RRF binding site
分子名称: 19-mer fragment of the 23S rRNA, 42-mer fragment of double helix from 16S rRNA, dodecamer fragment of double helix from 23S rRNA
著者Agrawal, R.K, Sharma, M.R, Kiel, M.C, Hirokawa, G, Booth, T.M, Spahn, C.M, Grassucci, R.A, Kaji, A, Frank, J.
登録日2004-04-16
公開日2004-06-15
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: Functional implications
Proc.Natl.Acad.Sci.USA, 101, 2004
6NF8
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BU of 6nf8 by Molmil
Structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit -Class I
分子名称: 28S ribosomal RNA, mitochondria, 28S ribosomal protein S10, ...
著者Sharma, M, Koripella, R, Agrawal, R.
登録日2018-12-19
公開日2019-02-27
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Structure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit.
iScience, 12, 2019
6NEQ
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BU of 6neq by Molmil
Structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit-Class-II
分子名称: 28S ribosomal RNA, mitochondrial, 28S ribosomal protein S10, ...
著者Sharma, M, Koripella, R, Agrawal, R.
登録日2018-12-18
公開日2019-02-27
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Structure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit.
iScience, 12, 2019
9BLG
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BU of 9blg by Molmil
Crystal structure of non-receptor protein tyrosine phosphatase SHP2 in complex with PF-07284892
分子名称: (1S)-1'-{6-[(2-amino-3-chloropyridin-4-yl)sulfanyl]-1,2,4-triazin-3-yl}-1,3-dihydrospiro[indene-2,4'-piperidin]-1-amine, Tyrosine-protein phosphatase non-receptor type 11
著者Bester, S.M, Wu, W.-I, Mou, T.-C.
登録日2024-04-30
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献SHP2 Inhibition Sensitizes Diverse Oncogene-Addicted Solid Tumors to Re-treatment with Targeted Therapy.
Cancer Discov, 13, 2023

 

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