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5VCA
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BU of 5vca by Molmil
VCP like ATPase from T. acidophilum (VAT)-Substrate bound conformation
分子名称: VCP-like ATPase
著者Ripstein, Z.A, Huang, R, Augustyniak, R, Kay, L.E, Rubinstein, J.L.
登録日2017-03-31
公開日2017-04-26
最終更新日2020-01-15
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structure of a AAA+ unfoldase in the process of unfolding substrate.
Elife, 6, 2017
5VC7
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BU of 5vc7 by Molmil
VCP like ATPase from T. acidophilum (VAT) - conformation 1
分子名称: ADENOSINE-5'-TRIPHOSPHATE, VCP-like ATPase
著者Ripstein, Z.A, Huang, R, Augustyniak, R, Kay, L.E, Rubinstein, J.L.
登録日2017-03-31
公開日2017-04-26
最終更新日2020-01-15
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of a AAA+ unfoldase in the process of unfolding substrate.
Elife, 6, 2017
6VFX
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BU of 6vfx by Molmil
ClpXP from Neisseria meningitidis - Conformation B
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
著者Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E.
登録日2020-01-06
公開日2020-01-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery.
Elife, 9, 2020
6VFS
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BU of 6vfs by Molmil
ClpXP from Neisseria meningitidis - Conformation A
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
著者Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E.
登録日2020-01-06
公開日2020-01-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery.
Elife, 9, 2020
6DKF
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BU of 6dkf by Molmil
Caseinolytic protease (ClpP) from Staphylococcus aureus mutant - V7A
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Ripstein, Z.A, Vahidi, S, Kay, L.E, Rubinstein, J.L.
登録日2018-05-29
公開日2018-06-27
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Reversible inhibition of the ClpP protease via an N-terminal conformational switch.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6VGQ
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BU of 6vgq by Molmil
ClpP1P2 complex from M. tuberculosis with GLF-CMK bound to ClpP1
分子名称: ATP-dependent Clp protease proteolytic subunit, ATP-dependent Clp protease proteolytic subunit 1, Z-Gly-leu-phe-CH2Cl
著者Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
登録日2020-01-08
公開日2020-03-18
最終更新日2020-04-01
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VGK
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BU of 6vgk by Molmil
ClpP1P2 complex from M. tuberculosis
分子名称: ATP-dependent Clp protease proteolytic subunit 1, ATP-dependent Clp protease proteolytic subunit 2
著者Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
登録日2020-01-08
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VGN
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BU of 6vgn by Molmil
ClpP1P2 complex from M. tuberculosis bound to ADEP
分子名称: ATP-dependent Clp protease proteolytic subunit, ATP-dependent Clp protease proteolytic subunit 1, R0M-WFP-ALO-PRO-YCP-ALA-MP8
著者Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
登録日2020-01-08
公開日2020-03-18
最終更新日2020-04-01
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
5G4F
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BU of 5g4f by Molmil
Structure of the ADP-bound VAT complex
分子名称: VCP-LIKE ATPASE
著者Huang, R, Ripstein, Z.A, Augustyniak, R, Lazniewski, M, Ginalski, K, Kay, L.E, Rubinstein, J.L.
登録日2016-05-12
公開日2016-07-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Unfolding the Mechanism of the Aaa+ Unfoldase Vat by a Combined Cryo-Em, Solution NMR Study.
Proc.Natl.Acad.Sci.USA, 113, 2016
5G4G
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BU of 5g4g by Molmil
Structure of the ATPgS-bound VAT complex
分子名称: VCP-LIKE ATPASE
著者Huang, R, Ripstein, Z.A, Augustyniak, R, Lazniewski, M, Ginalski, K, Kay, L.E, Rubinstein, J.L.
登録日2016-05-12
公開日2016-07-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Unfolding the Mechanism of the Aaa+ Unfoldase Vat by a Combined Cryo-Em, Solution NMR Study.
Proc.Natl.Acad.Sci.USA, 113, 2016
8F0U
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BU of 8f0u by Molmil
Structure of a 12mer DegP cage bound to the client protein hTRF1
分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1
著者Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E.
登録日2022-11-04
公開日2022-11-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP.
J.Am.Chem.Soc., 145, 2023
8F21
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BU of 8f21 by Molmil
Structure of a 30mer DegP cage bound to the client protein hTRF1
分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1
著者Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E.
登録日2022-11-06
公開日2022-11-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (14.1 Å)
主引用文献Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP.
J.Am.Chem.Soc., 145, 2023
8F0A
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BU of 8f0a by Molmil
Client-bound structure of a DegP trimer within a 12mer cage
分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1
著者Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E.
登録日2022-11-02
公開日2022-11-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP.
J.Am.Chem.Soc., 145, 2023
8F26
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BU of 8f26 by Molmil
Structure of a 60mer DegP cage bound to the client protein hTRF1
分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1
著者Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E.
登録日2022-11-07
公開日2022-11-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (9.7 Å)
主引用文献Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP.
J.Am.Chem.Soc., 145, 2023
8F1T
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BU of 8f1t by Molmil
Structure of an 18mer DegP cage bound to the client protein hTRF1
分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1
著者Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E.
登録日2022-11-06
公開日2022-11-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (12.1 Å)
主引用文献Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP.
J.Am.Chem.Soc., 145, 2023
8F1U
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BU of 8f1u by Molmil
Structure of a 24mer DegP cage bound to the client protein hTRF1
分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1
著者Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E.
登録日2022-11-06
公開日2022-11-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (13.8 Å)
主引用文献Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP.
J.Am.Chem.Soc., 145, 2023
7KR2
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BU of 7kr2 by Molmil
ClpP from Neisseria meningitidis - Compressed conformation
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
登録日2020-11-18
公開日2021-11-24
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A pH-Dependent Conformational Switch Controls N. meningitidis ClpP Protease Function
To Be Published

222415

件を2024-07-10に公開中

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