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3KB5
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BU of 3kb5 by Molmil
PRY-SPRY domain of human TRIM72
分子名称: Tripartite motif-containing protein 72
著者Park, E.Y, Kwon, O.-B, Jeong, B.-C, Song, H.K.
登録日2009-10-20
公開日2009-12-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of PRY-SPRY domain of human TRIM72
Proteins, 2009
2H8G
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BU of 2h8g by Molmil
5'-Methylthioadenosine Nucleosidase from Arabidopsis thaliana
分子名称: 5'-Methylthioadenosine Nucleosidase, ADENINE
著者Park, E.Y, Oh, S.I, Nam, M.J, Shin, J.S, Kim, K.N, Song, H.K.
登録日2006-06-07
公開日2006-10-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of 5'-methylthioadenosine nucleosidase from Arabidopsis thaliana at 1.5-A resolution
Proteins, 65, 2006
2DS6
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BU of 2ds6 by Molmil
Structure of the ZBD in the tetragonal crystal form
分子名称: ATP-dependent Clp protease ATP-binding subunit clpX, ZINC ION
著者Park, E.Y, Lee, B.G, Hong, S.B, Song, H.K.
登録日2006-06-22
公開日2007-02-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis of SspB-tail Recognition by the Zinc Binding Domain of ClpX.
J.Mol.Biol., 367, 2007
2DS8
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BU of 2ds8 by Molmil
Structure of the ZBD-XB complex
分子名称: ATP-dependent Clp protease ATP-binding subunit clpX, SspB-tail peptide, ZINC ION
著者Park, E.Y, Lee, B.G, Hong, S.B, Kim, H.W, Song, H.K.
登録日2006-06-22
公開日2007-02-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Basis of SspB-tail Recognition by the Zinc Binding Domain of ClpX.
J.Mol.Biol., 367, 2007
2DS7
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BU of 2ds7 by Molmil
Structure of the ZBD in the hexagonal crystal form
分子名称: ATP-dependent Clp protease ATP-binding subunit clpX, ZINC ION
著者Park, E.Y, Lee, B.G, Hong, S.B, Song, H.K.
登録日2006-06-22
公開日2007-02-13
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis of SspB-tail Recognition by the Zinc Binding Domain of ClpX.
J.Mol.Biol., 367, 2007
2DS5
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BU of 2ds5 by Molmil
Structure of the ZBD in the orthorhomibic crystal from
分子名称: ATP-dependent Clp protease ATP-binding subunit clpX, CALCIUM ION, TETRAETHYLENE GLYCOL, ...
著者Song, H.K, Park, E.Y, Lee, B.G, Hong, S.B.
登録日2006-06-22
公開日2007-02-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Basis of SspB-tail Recognition by the Zinc Binding Domain of ClpX.
J.Mol.Biol., 367, 2007
1TX6
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BU of 1tx6 by Molmil
trypsin:BBI complex
分子名称: Bowman-Birk type trypsin inhibitor, CALCIUM ION, Trypsin
著者Song, H.K, Park, E.Y, Kim, J.A, Kim, H.W, Kim, Y.S.
登録日2004-07-02
公開日2005-03-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the Bowman-Birk inhibitor from barley seeds in ternary complex with porcine trypsin
J.Mol.Biol., 343, 2004
3BSF
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BU of 3bsf by Molmil
Crystal Structure of the MTA/SAH nucleosidase
分子名称: ADENINE, At4g34840
著者Song, H.K, Park, E.Y, Choi, W.-S.
登録日2007-12-23
公開日2009-02-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the MTA/SAH nucleosidase
To be Published
1R6L
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BU of 1r6l by Molmil
Crystal Structure Of The tRNA Processing Enzyme Rnase pH From Pseudomonas Aeruginosa
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Ribonuclease PH, SULFATE ION
著者Choi, J.M, Park, E.Y, Kim, J.H, Chang, S.K, Cho, Y.
登録日2003-10-15
公開日2004-02-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Probing the functional importance of the hexameric ring structure of RNase PH
J.BIOL.CHEM., 279, 2004
7WLG
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BU of 7wlg by Molmil
Cryo-EM structure of GH31 alpha-1,3-glucosidase from Lactococcus lactis subsp. cremoris
分子名称: Alpha-xylosidase
著者Ikegaya, M, Moriya, T, Adachi, N, Kawasaki, M, Park, E.Y, Miyazaki, T.
登録日2022-01-13
公開日2022-03-30
最終更新日2022-05-11
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides.
J.Biol.Chem., 298, 2022
1R6M
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BU of 1r6m by Molmil
Crystal Structure Of The tRNA Processing Enzyme Rnase pH From Pseudomonas Aeruginosa In Complex With Phosphate
分子名称: PHOSPHATE ION, Ribonuclease PH
著者Choi, J.M, Park, E.Y, Kim, J.H, Chang, S.K, Cho, Y.
登録日2003-10-15
公開日2004-02-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Probing the functional importance of the hexameric ring structure of RNase PH
J.BIOL.CHEM., 279, 2004
3KTJ
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BU of 3ktj by Molmil
Structure of ClpP in complex with ADEP2 in monoclinic crystal form
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ATP-dependent Clp protease proteolytic subunit, Acyldepsipeptide 2
著者Lee, B.-G, Brotz-Oesterhelt, H, Song, H.K.
登録日2009-11-25
公開日2010-03-23
最終更新日2012-12-12
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism
Nat.Struct.Mol.Biol., 17, 2010
3KTI
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BU of 3kti by Molmil
Structure of ClpP in complex with ADEP1
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ATP-dependent Clp protease proteolytic subunit, Acyldepsipeptide 1, ...
著者Lee, B.-G, Brotz-Oesterhelt, H, Song, H.K.
登録日2009-11-25
公開日2010-03-23
最終更新日2013-02-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism
Nat.Struct.Mol.Biol., 17, 2010
3KTK
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BU of 3ktk by Molmil
Structure of ClpP in complex with ADEP2 in triclinic crystal form
分子名称: ATP-dependent Clp protease proteolytic subunit, Acyldepsipeptide 2
著者Lee, B.-G, Brotz-Oesterhelt, H, Song, H.K.
登録日2009-11-25
公開日2010-03-23
最終更新日2012-12-12
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism
Nat.Struct.Mol.Biol., 17, 2010
3KTG
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BU of 3ktg by Molmil
Structure of ClpP from Bacillus subtilis in monoclinic crystal form
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Lee, B.-G, Brotz-Oesterhelt, H, Song, H.K.
登録日2009-11-25
公開日2010-03-23
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism
Nat.Struct.Mol.Biol., 17, 2010
3KTH
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BU of 3kth by Molmil
Structure of ClpP from Bacillus subtilis in orthorombic crystal form
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Lee, B.-G, Brotz-Oesterhelt, H, Song, H.K.
登録日2009-11-25
公開日2010-03-23
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism
Nat.Struct.Mol.Biol., 17, 2010
6M76
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BU of 6m76 by Molmil
GH31 alpha-N-acetylgalactosaminidase from Enterococcus faecalis
分子名称: 1,2-ETHANEDIOL, LPXTG-motif cell wall anchor domain protein
著者Miyazaki, T.
登録日2020-03-17
公開日2020-05-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of the Enterococcus faecalis alpha-N-acetylgalactosaminidase, a member of the glycoside hydrolase family 31.
Febs Lett., 594, 2020
6M77
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BU of 6m77 by Molmil
GH31 alpha-N-acetylgalactosaminidase from Enterococcus faecalis in complex with N-acetylgalactosamine
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ...
著者Miyazaki, T.
登録日2020-03-17
公開日2020-05-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the Enterococcus faecalis alpha-N-acetylgalactosaminidase, a member of the glycoside hydrolase family 31.
Febs Lett., 594, 2020
6LGD
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BU of 6lgd by Molmil
Bombyx mori GH13 sucrose hydrolase complexed with 1,4-dideoxy-1,4-imino-D-arabinitol
分子名称: 1,4-DIDEOXY-1,4-IMINO-D-ARABINITOL, CALCIUM ION, GLYCEROL, ...
著者Miyazaki, T.
登録日2019-12-05
公開日2020-05-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases.
J.Biol.Chem., 295, 2020
6LGA
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BU of 6lga by Molmil
Bombyx mori GH13 sucrose hydrolase
分子名称: CALCIUM ION, GLYCEROL, MAGNESIUM ION, ...
著者Miyazaki, T.
登録日2019-12-05
公開日2020-05-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases.
J.Biol.Chem., 295, 2020
6LGH
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BU of 6lgh by Molmil
Bombyx mori GH13 sucrose hydrolase mutant E322Q covalent intermediate
分子名称: CALCIUM ION, MAGNESIUM ION, Sucrose hydrolase, ...
著者Miyazaki, T.
登録日2019-12-05
公開日2020-05-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases.
J.Biol.Chem., 295, 2020
6LGG
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BU of 6lgg by Molmil
Bombyx mori GH13 sucrose hydrolase mutant E322Q complexed with sucrose
分子名称: CALCIUM ION, MAGNESIUM ION, Sucrose hydrolase, ...
著者Miyazaki, T.
登録日2019-12-05
公開日2020-05-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases.
J.Biol.Chem., 295, 2020
6LGI
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BU of 6lgi by Molmil
Bombyx mori GH13 sucrose hydrolase mutant E322Q covalent intermediate complexed with fructose
分子名称: ACETATE ION, CALCIUM ION, MAGNESIUM ION, ...
著者Miyazaki, T.
登録日2019-12-05
公開日2020-05-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases.
J.Biol.Chem., 295, 2020
6LGC
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BU of 6lgc by Molmil
Bombyx mori GH13 sucrose hydrolase complexed with 1-deoxynojirimycin
分子名称: 1-DEOXYNOJIRIMYCIN, CALCIUM ION, GLYCEROL, ...
著者Miyazaki, T.
登録日2019-12-05
公開日2020-05-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases.
J.Biol.Chem., 295, 2020
6LGE
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Bombyx mori GH13 sucrose hydrolase complexed with acarbose
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, CALCIUM ION, MAGNESIUM ION, ...
著者Miyazaki, T.
登録日2019-12-05
公開日2020-05-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases.
J.Biol.Chem., 295, 2020

 

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