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2ZK7
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BU of 2zk7 by Molmil
Structure of a C-terminal deletion mutant of Thermoplasma acidophilum aldohexose dehydrogenase (AldT)
分子名称: Glucose 1-dehydrogenase related protein
著者Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, N, Tamura, T.
登録日2008-03-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献C-terminal tail derived from the neighboring subunit is critical for the activity of Thermoplasma acidophilum D-aldohexose dehydrogenase
Proteins, 74, 2009
3AUS
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BU of 3aus by Molmil
Crystal structure of Bacillus megaterium glucose dehydrogenase 4 in ligand-free form
分子名称: Glucose 1-dehydrogenase 4
著者Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T.
登録日2011-02-16
公開日2012-02-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AUT
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BU of 3aut by Molmil
Crystal structure of Bacillus megaterium glucose dehydrogenase 4 in complex with NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Glucose 1-dehydrogenase 4
著者Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T.
登録日2011-02-16
公開日2012-02-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AY6
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BU of 3ay6 by Molmil
Crystal structure of Bacillus megaterium glucose dehydrogenase 4 A258F mutant in complex with NADH and D-glucose
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CHLORIDE ION, Glucose 1-dehydrogenase 4, ...
著者Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T.
登録日2011-04-29
公開日2012-05-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AY7
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BU of 3ay7 by Molmil
Crystal structure of Bacillus megaterium glucose dehydrogenase 4 G259A mutant
分子名称: CHLORIDE ION, Glucose 1-dehydrogenase 4
著者Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T.
登録日2011-04-29
公開日2012-05-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AUU
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BU of 3auu by Molmil
Crystal structure of Bacillus megaterium glucose dehydrogenase 4 in complex with D-glucose
分子名称: Glucose 1-dehydrogenase 4, beta-D-glucopyranose
著者Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T.
登録日2011-02-16
公開日2012-02-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3VRM
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BU of 3vrm by Molmil
Structure of cytochrome P450 Vdh mutant T107A with bound vitamin D3
分子名称: (1S,3Z)-3-[(2E)-2-[(1R,3AR,7AS)-7A-METHYL-1-[(2R)-6-METHYLHEPTAN-2-YL]-2,3,3A,5,6,7-HEXAHYDRO-1H-INDEN-4-YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOHEXAN-1-OL, PROTOPORPHYRIN IX CONTAINING FE, Vitamin D(3) 25-hydroxylase
著者Nishioka, T, Yasutake, Y, Tamura, T.
登録日2012-04-12
公開日2013-04-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献A single mutation at the ferredoxin binding site of p450 vdh enables efficient biocatalytic production of 25-hydroxyvitamin d3.
Chembiochem, 14, 2013
2GLT
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BU of 2glt by Molmil
STRUCTURE OF ESCHERICHIA COLI GLUTATHIONE SYNTHETASE AT PH 6.0.
分子名称: GLUTATHIONE BIOSYNTHETIC LIGASE
著者Matsuda, K, Yamaguchi, H, Kato, H, Nishioka, T, Katsube, Y, Oda, J.
登録日1995-05-16
公開日1995-07-31
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins.
Protein Eng., 9, 1996
1GSH
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BU of 1gsh by Molmil
STRUCTURE OF ESCHERICHIA COLI GLUTATHIONE SYNTHETASE AT PH 7.5
分子名称: GLUTATHIONE BIOSYNTHETIC LIGASE
著者Matsuda, K, Kato, H, Yamaguchi, H, Nishioka, T, Katsube, Y, Oda, J.
登録日1995-05-16
公開日1996-07-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins.
Protein Eng., 9, 1996
1GSA
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BU of 1gsa by Molmil
STRUCTURE OF GLUTATHIONE SYNTHETASE COMPLEXED WITH ADP AND GLUTATHIONE
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLUTATHIONE, GLUTATHIONE SYNTHETASE, ...
著者Hara, T, Kato, H, Nishioka, T, Katsube, Y, Oda, J.
登録日1995-06-08
公開日1996-06-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A pseudo-michaelis quaternary complex in the reverse reaction of a ligase: structure of Escherichia coli B glutathione synthetase complexed with ADP, glutathione, and sulfate at 2.0 A resolution.
Biochemistry, 35, 1996
3VTZ
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BU of 3vtz by Molmil
Structure of Thermoplasma volcanium aldohexose dehydrogenase
分子名称: Glucose 1-dehydrogenase
著者Yasutake, Y, Nishioka, T, Tamura, T.
登録日2012-06-12
公開日2012-07-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Thermoplasma volcanium aldohexose dehydrogenase
To be Published
1GLV
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BU of 1glv by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE GLUTATHIONE SYNTHETASE FROM ESCHERICHIA COLI B AT 2.0 ANGSTROMS RESOLUTION
分子名称: GLUTATHIONE SYNTHASE
著者Yamaguchi, H, Kato, H, Tanaka, T, Katsube, Y.
登録日1993-03-12
公開日1994-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Three-dimensional structure of the glutathione synthetase from Escherichia coli B at 2.0 A resolution.
J.Mol.Biol., 229, 1993
11AS
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BU of 11as by Molmil
ASPARAGINE SYNTHETASE MUTANT C51A, C315A COMPLEXED WITH L-ASPARAGINE
分子名称: ASPARAGINE, ASPARAGINE SYNTHETASE
著者Nakatsu, T, Kato, H, Oda, J.
登録日1997-12-02
公開日1998-12-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of asparagine synthetase reveals a close evolutionary relationship to class II aminoacyl-tRNA synthetase.
Nat.Struct.Biol., 5, 1998
12AS
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BU of 12as by Molmil
ASPARAGINE SYNTHETASE MUTANT C51A, C315A COMPLEXED WITH L-ASPARAGINE AND AMP
分子名称: ADENOSINE MONOPHOSPHATE, ASPARAGINE, ASPARAGINE SYNTHETASE
著者Nakatsu, T, Kato, H, Oda, J.
登録日1997-12-02
公開日1998-12-30
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of asparagine synthetase reveals a close evolutionary relationship to class II aminoacyl-tRNA synthetase.
Nat.Struct.Biol., 5, 1998
3A4H
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BU of 3a4h by Molmil
Structure of cytochrome P450 vdh from Pseudonocardia autotrophica (orthorhombic crystal form)
分子名称: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Vitamin D hydroxylase
著者Yasutake, Y, Fujii, Y, Cheon, W.K, Arisawa, A, Tamura, T.
登録日2009-07-07
公開日2010-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Structural evidence for enhancement of sequential vitamin D3 hydroxylation activities by directed evolution of cytochrome P450 vitamin D3 hydroxylase
J.Biol.Chem., 285, 2010
3A51
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BU of 3a51 by Molmil
Structure of cytochrome P450 Vdh mutant (Vdh-K1) obtained by directed evolution with bound 25-hydroxyvitamin D3
分子名称: 3-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANOL, ACETATE ION, CALCIUM ION, ...
著者Yasutake, Y, Fujii, Y, Cheon, W.K, Arisawa, A, Tamura, T.
登録日2009-07-24
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural evidence for enhancement of sequential vitamin D3 hydroxylation activities by directed evolution of cytochrome P450 vitamin D3 hydroxylase
J.Biol.Chem., 285, 2010
3WEC
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BU of 3wec by Molmil
Structure of P450 RauA (CYP1050A1) complexed with a biosynthetic intermediate of aurachin RE
分子名称: 3-[(2E,6E,9R)-9-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]-2-methylquinolin-4(1H)-one, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Yasutake, Y, Kitagawa, W, Tamura, T.
登録日2013-07-03
公開日2014-01-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structure of the quinoline N-hydroxylating cytochrome P450 RauA, an essential enzyme that confers antibiotic activity on aurachin alkaloids
Febs Lett., 588, 2014
3TXM
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BU of 3txm by Molmil
Crystal structure of Rpn6 from Drosophila melanogaster, Gd(3+) complex
分子名称: 26S proteasome regulatory complex subunit p42B, GADOLINIUM ION, SULFATE ION
著者Pathare, G.R, Bracher, A.
登録日2011-09-23
公開日2011-12-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The proteasomal subunit Rpn6 is a molecular clamp holding the core and regulatory subcomplexes together.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TXN
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BU of 3txn by Molmil
Crystal structure of Rpn6 from Drosophila melanogaster, native data
分子名称: 26S proteasome regulatory complex subunit p42B, GLYCEROL, SULFATE ION
著者Pathare, G.R, Bracher, A.
登録日2011-09-23
公開日2011-12-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.496 Å)
主引用文献The proteasomal subunit Rpn6 is a molecular clamp holding the core and regulatory subcomplexes together.
Proc.Natl.Acad.Sci.USA, 109, 2012
3A4G
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BU of 3a4g by Molmil
Structure of cytochrome P450 vdh from Pseudonocardia autotrophica (trigonal crystal form)
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, PROTOPORPHYRIN IX CONTAINING FE, Vitamin D hydroxylase
著者Yasutake, Y, Fujii, Y, Cheon, W.K, Arisawa, A, Tamura, T.
登録日2009-07-07
公開日2010-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural evidence for enhancement of sequential vitamin D3 hydroxylation activities by directed evolution of cytochrome P450 vitamin D3 hydroxylase
J.Biol.Chem., 285, 2010
3A4Z
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BU of 3a4z by Molmil
Structure of cytochrome P450 Vdh mutant (Vdh-K1) obtained by directed evolution
分子名称: ACETATE ION, CALCIUM ION, GLYCEROL, ...
著者Yasutake, Y, Fujii, Y, Cheon, W.K, Arisawa, A, Tamura, T.
登録日2009-07-24
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural evidence for enhancement of sequential vitamin D3 hydroxylation activities by directed evolution of cytochrome P450 vitamin D3 hydroxylase
J.Biol.Chem., 285, 2010
3A50
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Structure of cytochrome P450 Vdh mutant (Vdh-K1) obtained by directed evolution with bound vitamin D3
分子名称: (1S,3Z)-3-[(2E)-2-[(1R,3AR,7AS)-7A-METHYL-1-[(2R)-6-METHYLHEPTAN-2-YL]-2,3,3A,5,6,7-HEXAHYDRO-1H-INDEN-4-YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOHEXAN-1-OL, ACETATE ION, CALCIUM ION, ...
著者Yasutake, Y, Fujii, Y, Cheon, W.K, Arisawa, A, Tamura, T.
登録日2009-07-24
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural evidence for enhancement of sequential vitamin D3 hydroxylation activities by directed evolution of cytochrome P450 vitamin D3 hydroxylase
J.Biol.Chem., 285, 2010

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