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8P91
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BU of 8p91 by Molmil
Hfq from Chromobacterium haemolyticum; a P6 space group monomer
分子名称: RNA-binding protein Hfq
著者Nikulin, A.D, Lekontseva, N.V.
登録日2023-06-05
公開日2023-07-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Hfq from Chromobacterium haemolyticum
Crystallography Reports
5I21
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BU of 5i21 by Molmil
Y55W Hfq from Pseudomonas aeruginosa
分子名称: CHLORIDE ION, RNA-binding protein Hfq
著者Nikulin, A.D, Lekontseva, N.V.
登録日2016-02-08
公開日2016-03-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Y55W Hfq from Pseudomonas aeruginosa
To Be Published
5MKN
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BU of 5mkn by Molmil
Crystal structure of SmAP (LSm) protein from Methanococcus vannielii
分子名称: Like-Sm ribonucleoprotein core, TETRAETHYLENE GLYCOL, URIDINE-5'-MONOPHOSPHATE
著者Nikulin, A.D, Lekontseva, N.V, Tishchenko, S.V, Kravchenko, O.V.
登録日2016-12-05
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of SmAP (LSm) protein from Methanococcus vannielii in complex with URIDINE-5'-MONOPHOSPHATE
To Be Published
1KUQ
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BU of 1kuq by Molmil
CRYSTAL STRUCTURE OF T3C MUTANT S15 RIBOSOMAL PROTEIN IN COMPLEX WITH 16S RRNA
分子名称: 16S RIBOSOMAL RNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, SULFATE ION
著者Nikulin, A.D, Tishchenko, S, Revtovich, S, Ehresmann, B, Ehresmann, C, Dumas, P, Garber, M, Nikonov, S, Nevskaya, N.
登録日2002-01-22
公開日2003-06-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Role of N-terminal helix in interaction of ribosomal protein S15 with 16S rRNA.
Biochemistry Mosc., 69, 2004
8P9M
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BU of 8p9m by Molmil
Hexameric Hfq from Chromobacterium haemolyticum
分子名称: GLYCEROL, RNA-binding protein Hfq
著者Nikulin, A.D, Lekontseva, N.V.
登録日2023-06-06
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Structure of the Hfq Protein from Chromobacterium haemolyticum Revealed a New Variant of Regulation of RNA Binding with the Protein
Crystallography Reports, 68, 2023
6TFL
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BU of 6tfl by Molmil
Lsm protein (SmAP) from Halobacterium salinarum
分子名称: CALCIUM ION, GLYCEROL, RNA-binding protein Lsm, ...
著者Nikulin, A.D, Fando, M.S, Lekontseva, N.V.
登録日2019-11-14
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.397 Å)
主引用文献Structure and RNA-Binding Properties of Lsm Protein from Halobacterium salinarum.
Biochemistry Mosc., 86, 2021
6XYJ
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BU of 6xyj by Molmil
Hfq from E.coli with inserted long loop L4 sequence
分子名称: RNA-binding protein Hfq
著者Nikulin, A.D, Alipov, A.A, Lekontseva, N.V.
登録日2020-01-30
公開日2021-02-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.772 Å)
主引用文献Structure of a Mutant Form of Translation Regulator Hfq with the Extended Loop L4
Crystallography Reports, 66, 2021
1Y4I
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BU of 1y4i by Molmil
Crystal structure of Citrobacter Freundii L-methionine-lyase
分子名称: SULFATE ION, methionine gamma-lyase
著者Revtovich, S.V, Mamaeva, D.V, Morozova, E.A, Nikulin, A.D, Nikonov, S.V, Garber, M.B, Demidkina, T.V.
登録日2004-12-01
公開日2005-06-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of Citrobacter freundii L-methionine gamma-lyase.
Acta Crystallogr.,Sect.F, 61, 2005
3I1F
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BU of 3i1f by Molmil
Gamma-subunit of the translation initiation factor 2 from S. solfataricus in complex with Gpp(CH2)p
分子名称: PHOSPHATE ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Translation initiation factor 2 subunit gamma
著者Stolboushkina, E.A, Nikonov, S.V, Nikulin, A.D, Blaesi, U, Garber, M.B, Nikonov, O.S.
登録日2009-06-26
公開日2010-06-30
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献5-prime-triphosphate end of mRNA recognizes the second GTP-binding site on the gamma-subunit of the archaeal translation initiation factor 2
To be Published
4HF8
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BU of 4hf8 by Molmil
Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with glycine
分子名称: DI(HYDROXYETHYL)ETHER, GLYCINE, Methionine gamma-lyase, ...
著者Revtovich, S.V, Morozova, E.A, Anufrieva, N.V, Nikulin, A.D, Demidkina, T.V.
登録日2012-10-05
公開日2013-11-06
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of the external aldimine of Citrobacter freundii methionine gamma-lyase with glycine provides insight in mechanisms of two stages of physiological reaction and isotope exchange of alpha- and beta-protons of competitive inhibitors.
Biochimie, 101, 2014
5M3Z
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BU of 5m3z by Molmil
Crystal structure of Citrobacter freundii methionine gamma-lyase with C115H replacement in the complex with L-norleucine
分子名称: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO-HEXANOIC ACID, Methionine gamma-lyase, NORLEUCINE, ...
著者Revtovich, S.V, Nikulin, A.D, Anufrieva, N.V, Morozova, E.A, Demidkina, T.V.
登録日2016-10-17
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of mutant form Cys115His of Citrobacter freundii methionine gamma-lyase complexed with l-norleucine.
Biochim. Biophys. Acta, 1865, 2017
4RJL
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BU of 4rjl by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus complexed with GDPCP
分子名称: 2,5,8,11,14,17,20,23-OCTAOXAPENTACOSAN-25-OL, FORMIC ACID, MAGNESIUM ION, ...
著者Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2014-10-09
公開日2015-11-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6401 Å)
主引用文献Crystal structure of gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDPCP at 1.64A resolution
To be Published
5D5S
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BU of 5d5s by Molmil
Crystal structure of methionine gamma-lyase from Citrobacter freundii, S339A mutant
分子名称: DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, PYRIDOXAL-5'-PHOSPHATE, ...
著者Revtovich, S.V, Nikulin, A.D, Anufrieva, N.V, Morozova, E.A, Demidkina, T.V.
登録日2015-08-11
公開日2016-08-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The crystal structure of methionine gamma-lyase from Citrobacter freundii, S339A mutant
To Be Published
5DSZ
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BU of 5dsz by Molmil
Gamma-subunit of the translation initiation factor 2 from S. solfataricus
分子名称: Translation initiation factor 2 subunit gamma
著者Kravchenko, O.V, Nikonov, O.S, Stolboushkina, E.A, Nevskaya, N.A, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2015-09-17
公開日2016-08-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Gamma-subunit of the translation initiation factor 2 from S. solfataricus
To Be Published
5E4Z
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BU of 5e4z by Molmil
Crystal structure of methionine gamma-lyase from Citrobacter freundii with C115A substitution
分子名称: DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, PENTAETHYLENE GLYCOL, ...
著者Revtovich, S.V, Nikulin, A.D, Anufrieva, N.V, Morozova, E.A, Demidkina, T.V.
登録日2015-10-07
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structure of C115A mutant L-methionine gamma-lyase from Citrobacter freundii
To Be Published
3JW9
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BU of 3jw9 by Molmil
Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with S-ethyl-cysteine
分子名称: DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, S-ethyl-L-cysteine
著者Revtovish, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V.
登録日2009-09-18
公開日2010-09-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Three-dimensional structures of noncovalent complexes of Citrobacter freundii methionine gamma-lyase with substrates.
Biochemistry Mosc., 76, 2011
3JWB
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BU of 3jwb by Molmil
Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with norleucine
分子名称: DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, NORLEUCINE
著者Revtovish, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V.
登録日2009-09-18
公開日2010-09-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Three-dimensional structures of noncovalent complexes of Citrobacter freundii methionine gamma-lyase with substrates.
Biochemistry Mosc., 76, 2011
3JWA
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BU of 3jwa by Molmil
Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with methionine phosphinate
分子名称: (1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHINIC ACID, DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase
著者Revtovish, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V.
登録日2009-09-18
公開日2010-09-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Three-dimensional structures of noncovalent complexes of Citrobacter freundii methionine gamma-lyase with substrates.
Biochemistry Mosc., 76, 2011
3MKJ
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BU of 3mkj by Molmil
Methionine gamma-lyase from Citrobacter freundii with pyridoximine-5'-phosphate
分子名称: Methionine gamma-lyase, [5-hydroxy-4-(iminomethyl)-6-methyl-pyridin-3-yl]methyl dihydrogen phosphate
著者Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V.
登録日2010-04-15
公開日2010-08-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Exploring methionine gamma-lyase structure-function relationship via microspectrophotometry and X-ray crystallography
Biochim.Biophys.Acta, 1814, 2011
4MKJ
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BU of 4mkj by Molmil
Crystal structure of L-methionine gamma-lyase from Citrobacter freundii modified by allicine
分子名称: Methionine gamma-lyase, PENTAETHYLENE GLYCOL, SODIUM ION, ...
著者Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Zakomirdina, L.N, Demidkina, T.V.
登録日2013-09-05
公開日2014-11-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Alliin is a suicide substrate of Citrobacter freundii methionine gamma-lyase: structural bases of inactivation of the enzyme.
Acta Crystallogr.,Sect.D, 70, 2014
4P7Y
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BU of 4p7y by Molmil
L-methionine gamma-lyase from Citrobacter freundii with Y58F substitution
分子名称: DI(HYDROXYETHYL)ETHER, METHIONINE GAMMA-LYASE, PENTAETHYLENE GLYCOL
著者Revtovich, S.V, Nikulin, A.D, Anufrieva, N.V, Morozova, E.A, Demidkina, T.V.
登録日2014-03-28
公開日2014-11-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with Y58F substitution
To Be Published
4NBS
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BU of 4nbs by Molmil
The structure of aIF2gamma subunit H20F from archaeon Sulfolobus solfataricus complexed with GDPCP
分子名称: FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2013-10-23
公開日2014-10-29
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.305 Å)
主引用文献The structure of aIF2gamma subunit H20F from archaeon Sulfolobus solfataricus complexed with GDPCP
To be Published
4MML
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BU of 4mml by Molmil
D40A Hfq from Pseudomonas aeruginosa
分子名称: MAGNESIUM ION, Protein hfq, SULFATE ION, ...
著者Murina, V.N, Filimonov, V.V, Melnik, B.S, Uhlein, M, Mueller, U, Weiss, M, Nikulin, A.D.
登録日2013-09-09
公開日2014-07-09
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Effect of conserved intersubunit amino Acid substitutions on hfq protein structure and stability.
Biochemistry Mosc., 79, 2014
4MKK
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BU of 4mkk by Molmil
Crystal structure of C115A mutant L-methionine gamma-lyase from Citrobacter freundii modified by allicine
分子名称: CHLORIDE ION, Methionine gamma-lyase, POTASSIUM ION, ...
著者Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Zakomirdina, L.N, Demidkina, T.V.
登録日2013-09-05
公開日2014-11-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Alliin is a suicide substrate of Citrobacter freundii methionine gamma-lyase: structural bases of inactivation of the enzyme.
Acta Crystallogr.,Sect.D, 70, 2014
4OMA
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BU of 4oma by Molmil
The crystal structure of methionine gamma-lyase from Citrobacter freundii in complex with L-cycloserine pyridoxal-5'-phosphate
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL, ...
著者Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V.
登録日2014-01-27
公開日2014-11-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Pre-steady-state Kinetic and Structural Analysis of Interaction of Methionine gamma-Lyase from Citrobacter freundii with Inhibitors.
J.Biol.Chem., 290, 2015

 

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