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3TW2
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BU of 3tw2 by Molmil
High resolution structure of human histidine triad nucleotide-binding protein 1 (hHINT1)/AMP complex in a monoclinic space group
分子名称: ADENOSINE MONOPHOSPHATE, Histidine triad nucleotide-binding protein 1
著者Dolot, R.M, Wlodarczyk, A, Ozga, M, Krakowiak, A, Nawrot, B.
登録日2011-09-21
公開日2011-11-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献A new crystal form of human histidine triad nucleotide-binding protein 1 (hHINT1) in complex with adenosine 5'-monophosphate at 1.38 A resolution.
Acta Crystallogr.,Sect.F, 68, 2012
4ZKV
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BU of 4zkv by Molmil
Crystal structure of human histidine triad nucleotide-binding protein 1 (hHINT1) refined to 1.92A at P21 space group
分子名称: Histidine triad nucleotide-binding protein 1, SULFATE ION
著者Dolot, R.M, Seda, A, Nawrot, B.
登録日2015-04-30
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystallographic studies of the complex of human HINT1 protein with a non-hydrolyzable analog of Ap4A.
Int.J.Biol.Macromol., 87, 2016
4ZKL
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BU of 4zkl by Molmil
Crystal structure of human histidine triad nucleotide-binding protein 1 (hHINT1) complexed with JB419 (AP4A analog)
分子名称: (2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-[2-[[(2S)-3-[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl]oxy-2-oxidanyl-propoxy]-sulfanyl-phosphoryl]oxyethyl]oxolane-3,4-diol, ADENOSINE MONOPHOSPHATE, Histidine triad nucleotide-binding protein 1
著者Dolot, R.M, Kaczmarek, R, Seda, A, Krakowiak, A, Baraniak, J, Nawrot, B.
登録日2015-04-30
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Crystallographic studies of the complex of human HINT1 protein with a non-hydrolyzable analog of Ap4A.
Int.J.Biol.Macromol., 87, 2016
6EO6
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BU of 6eo6 by Molmil
X-ray structure of the complex between human alpha-thrombin and modified 15-mer DNA aptamer containing 5-(3-(2-(1H-indol-3-yl)acetamide-N-yl)-1-propen-1-yl)-2'-deoxyuridine residue
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, GA63A - TBA MODIFIED APTAMER, ...
著者Dolot, R.M, Nawrot, B, Yang, X.
登録日2017-10-09
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Crystal structures of thrombin in complex with chemically modified thrombin DNA aptamers reveal the origins of enhanced affinity.
Nucleic Acids Res., 46, 2018
6EO7
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BU of 6eo7 by Molmil
X-ray structure of the complex between human alpha-thrombin and modified 15-mer DNA aptamer containing 5-(3-(acetamide-N-yl)-1-propen-1-yl)-2'-deoxyuridine residue
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, GA68B2 - MODIFIED HUMAN THROMBIN BINDING APTAMER, ...
著者Dolot, R.M, Nawrot, B, Yang, X.
登録日2017-10-09
公開日2017-10-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Crystal structures of thrombin in complex with chemically modified thrombin DNA aptamers reveal the origins of enhanced affinity.
Nucleic Acids Res., 46, 2018
3QGZ
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BU of 3qgz by Molmil
Re-investigated high resolution crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from rabbit complexed with adenosine
分子名称: ADENOSINE, Histidine triad nucleotide-binding protein 1
著者Dolot, R.M, Ozga, M, Krakowiak, A, Nawrot, B, Stec, W.J.
登録日2011-01-25
公開日2011-02-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High-resolution X-ray crystal structure of rabbit histidine triad nucleotide-binding protein 1 (rHINT1) - adenosine complex at 1.10A resolution
Acta Crystallogr.,Sect.D, 67, 2011
7OW0
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BU of 7ow0 by Molmil
1.55 A crystal structure of DNA/2'-O-methyl-RNA heteroduplex with overhangs solved by Zn-SAD.
分子名称: DNA (5'-D(*TP*CP*TP*CP*CP*TP*AP*GP*G)-3'), RNA (5'-R(*(OMC)P*(OMU)P*(A2M)P*(OMG)P*(OMG)P*(A2M)P*(OMG)P*(A2M)P*(OMC))-3'), ZINC ION
著者Dolot, R.M, Maciaszek, A, Nawrot, B.C.
登録日2021-06-15
公開日2021-07-14
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献First High-Resolution Crystal Structures of DNA:2'-O-Methyl-RNA Heteroduplexes
Crystals, 2022
7OXS
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BU of 7oxs by Molmil
1.91 A crystal structure of DNA/2'-O-methyl-RNA heteroduplex
分子名称: DNA (5'-D(*GP*TP*CP*TP*CP*CP*TP*AP*G)-3'), RNA (5'-R(*(OMC)P*(OMU)P*(A2M)P*(OMG)P*(OMG)P*(A2M)P*(OMG)P*(A2M)P*(OMC))-3'), SULFATE ION
著者Dolot, R.M, Maciaszek, A, Nawrot, B.C.
登録日2021-06-23
公開日2021-07-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献First High-Resolution Crystal Structures of DNA:2'-O-Methyl-RNA Heteroduplexes
Crystals, 2022
6YQD
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BU of 6yqd by Molmil
Human histidine triad nucleotide-binding protein 2 (hHINT2) refined to 1.41 A in P212121 space group
分子名称: Histidine triad nucleotide-binding protein 2, mitochondrial, POTASSIUM ION
著者Dolot, R.D, Wlodarczyk, A, Bujacz, G.D, Nawrot, B.C.
登録日2020-04-16
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.407 Å)
主引用文献Biochemical, crystallographic and biophysical characterization of histidine triad nucleotide-binding protein 2 with different ligands including a non-hydrolyzable analog of Ap4A.
Biochim Biophys Acta Gen Subj, 1865, 2021
6YI0
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BU of 6yi0 by Molmil
Human histidine triad nucleotide-binding protein 2 (hHINT2) refined to 1.65 A in P41212 space group
分子名称: Histidine triad nucleotide-binding protein 2, mitochondrial, SODIUM ION
著者Dolot, R.D, Wlodarczyk, A, Bujacz, G.D, Nawrot, B.C.
登録日2020-03-31
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Biochemical, crystallographic and biophysical characterization of histidine triad nucleotide-binding protein 2 with different ligands including a non-hydrolyzable analog of Ap4A.
Biochim Biophys Acta Gen Subj, 1865, 2021
6YQM
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BU of 6yqm by Molmil
Human histidine triad nucleotide-binding protein 1 (hHINT1) complexed with dGMP and refined to 1.02 A
分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, DI(HYDROXYETHYL)ETHER, Histidine triad nucleotide-binding protein 1
著者Dolot, R.D, Seda, A, Nawrot, B.C.
登録日2020-04-17
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Biochemical, crystallographic and biophysical characterization of histidine triad nucleotide-binding protein 2 with different ligands including a non-hydrolyzable analog of Ap4A.
Biochim Biophys Acta Gen Subj, 1865, 2021
6YPX
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BU of 6ypx by Molmil
Human histidine triad nucleotide-binding protein 2 (hHINT2) refined to 2.11 A in C2221 space group
分子名称: CACODYLATE ION, GLYCEROL, Histidine triad nucleotide-binding protein 2, ...
著者Dolot, R.D, Wlodarczyk, A, Bujacz, G.D, Nawrot, B.C.
登録日2020-04-16
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Biochemical, crystallographic and biophysical characterization of histidine triad nucleotide-binding protein 2 with different ligands including a non-hydrolyzable analog of Ap4A.
Biochim Biophys Acta Gen Subj, 1865, 2021
6YPR
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BU of 6ypr by Molmil
Human histidine triad nucleotide-binding protein 2 (hHINT2) refined to 1.26 A in H32 space group
分子名称: GLYCEROL, Histidine triad nucleotide-binding protein 2, mitochondrial
著者Dolot, R.D, Wlodarczyk, A, Bujacz, G.D, Nawrot, B.C.
登録日2020-04-16
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Biochemical, crystallographic and biophysical characterization of histidine triad nucleotide-binding protein 2 with different ligands including a non-hydrolyzable analog of Ap4A.
Biochim Biophys Acta Gen Subj, 1865, 2021
6YVP
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BU of 6yvp by Molmil
Human histidine triad nucleotide-binding protein 2 (hHINT2) complexed with dGMP and refined to 2.77 A
分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, Histidine triad nucleotide-binding protein 2, mitochondrial
著者Dolot, R.D, Krakowiak, A, Nawrot, B.C.
登録日2020-04-28
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Biochemical, crystallographic and biophysical characterization of histidine triad nucleotide-binding protein 2 with different ligands including a non-hydrolyzable analog of Ap4A.
Biochim Biophys Acta Gen Subj, 1865, 2021
5DO4
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BU of 5do4 by Molmil
Thrombin-RNA aptamer complex
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pallan, P.S, Egli, M.
登録日2015-09-10
公開日2016-09-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.859 Å)
主引用文献Evoking picomolar binding in RNA by a single phosphorodithioate linkage.
Nucleic Acids Res., 44, 2016
2MN0
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BU of 2mn0 by Molmil
D loop of tRNA(Met)
分子名称: 5'-R(*GP*GP*AP*GP*AP*GP*(H2U)P*GP*GP*AP*AP*CP*UP*CP*C)-3'
著者Lescrinier, E, Dyubankova, N, Herdewijn, P.
登録日2014-03-25
公開日2015-04-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Contribution of dihydrouridine in folding of the D-arm in tRNA.
Org.Biomol.Chem., 13, 2015
4RBY
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BU of 4rby by Molmil
First X-ray structure of RNA containing guanosine phosphorodithioate
分子名称: 5'-R(*CP*GP*CP*(2SG)P*AP*AP*UP*UP*AP*GP*CP*G)-3', STRONTIUM ION
著者Pallan, P.S, Egli, M.
登録日2014-09-13
公開日2015-09-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Crystal Structure, Stability and siRNA Activity of Phosphorodithioate-Modified RNAs
To be Published
4RC0
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BU of 4rc0 by Molmil
X-ray structure of RNA containing guanosine phosphorodithioate
分子名称: 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*(A2M)P*(2SG)P*CP*G)-3'
著者Pallan, P.S, Egli, M.
登録日2014-09-13
公開日2015-09-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Crystal Structure, Stability and siRNA Activity of Phosphorodithioate-Modified RNAs
To be Published
4RBZ
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BU of 4rbz by Molmil
X-ray structure of RNA containing adenosine phosphorodithioate
分子名称: 5'-R(*CP*GP*CP*GP*(A2M)P*(ADS)P*UP*UP*AP*GP*CP*G)-3'
著者Pallan, P.S, Egli, M.
登録日2014-09-13
公開日2015-09-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Crystal Structure, Stability and siRNA Activity of Phosphorodithioate-Modified RNAs
To be Published
3O1C
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BU of 3o1c by Molmil
High resolution crystal structure of histidine triad nucleotide-binding protein 1 (Hint1) C38A mutant from rabbit complexed with Adenosine
分子名称: ADENOSINE, Histidine triad nucleotide-binding protein 1, SODIUM ION
著者Dolot, R.M, Ozga, M, Krakowiak, A.K, Nawrot, B, Stec, W.J.
登録日2010-07-21
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Histidine Triad Nucleotide-binding Protein 1 (HINT-1) Phosphoramidase Transforms Nucleoside 5'-O-Phosphorothioates to Nucleoside 5'-O-Phosphates.
J.Biol.Chem., 285, 2010
3O1X
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BU of 3o1x by Molmil
High resolution crystal structure of histidine triad nucleotide-binding protein 1 (Hint1) C84A mutant from rabbit complexed with adenosine
分子名称: ADENOSINE, Histidine triad nucleotide-binding protein 1, SODIUM ION
著者Dolot, R.M, Ozga, M, Krakowiak, A.K, Nawrot, B, Stec, W.J.
登録日2010-07-22
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Histidine Triad Nucleotide-binding Protein 1 (HINT-1) Phosphoramidase Transforms Nucleoside 5'-O-Phosphorothioates to Nucleoside 5'-O-Phosphates.
J.Biol.Chem., 285, 2010
3O1Z
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BU of 3o1z by Molmil
High resolution crystal structure of histidine triad nucleotide-binding protein 1 (Hint1) double cysteine mutant from rabbit
分子名称: Histidine triad nucleotide-binding protein 1
著者Dolot, R.M, Ozga, M, Krakowiak, A.K, Nawrot, B, Stec, W.J.
登録日2010-07-22
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Histidine Triad Nucleotide-binding Protein 1 (HINT-1) Phosphoramidase Transforms Nucleoside 5'-O-Phosphorothioates to Nucleoside 5'-O-Phosphates.
J.Biol.Chem., 285, 2010

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件を2024-09-18に公開中

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