Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1YLB
DownloadVisualize
BU of 1ylb by Molmil
NMR solution structure of the reduced spinach plastocyanin
分子名称: COPPER (I) ION, Plastocyanin, chloroplast
著者Musiani, F, Dikiy, A, Semenov, A.Y, Ciurli, S.
登録日2005-01-19
公開日2005-04-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the Intermolecular Complex between Plastocyanin and Cytochrome f from Spinach.
J.Biol.Chem., 280, 2005
5A6T
DownloadVisualize
BU of 5a6t by Molmil
1.65 A resolution Sulphite inhibited Sporosarcina pasteurii urease
分子名称: 1,2-ETHANEDIOL, NICKEL (II) ION, SULFATE ION, ...
著者Mazzei, L, Cianci, M, Benini, S, Bertini, L, Musiani, F, Ciurli, S.
登録日2015-07-01
公開日2015-12-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Kinetic and Structural Studies Reveal a Unique Binding Mode of Sulfite to the Nickel Center in Urease.
J.Inorg.Biochem., 154, 2015
6G81
DownloadVisualize
BU of 6g81 by Molmil
Solution structure of the Ni metallochaperone HypA from Helicobacter pylori
分子名称: Hydrogenase maturation factor HypA, ZINC ION
著者Spronk, C.A.E.M, Zerko, S, Gorka, M, Kozminski, W, Bardiaux, B, Zambelli, B, Musiani, F, Piccioli, M, Hu, H, Maroney, M, Ciurli, S.
登録日2018-04-07
公開日2018-10-10
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structure and dynamics of Helicobacter pylori nickel-chaperone HypA: an integrated approach using NMR spectroscopy, functional assays and computational tools.
J. Biol. Inorg. Chem., 23, 2018
5G4H
DownloadVisualize
BU of 5g4h by Molmil
1.50 A resolution catechol (1,2-dihydroxybenzene) inhibited Sporosarcina pasteurii urease
分子名称: 1,2-ETHANEDIOL, CATECHOL, HYDROXIDE ION, ...
著者Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
登録日2016-05-13
公開日2016-12-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inactivation of Urease by Catechol: Kinetics and Structure.
J.Inorg.Biochem., 166, 2016
5FSD
DownloadVisualize
BU of 5fsd by Molmil
1.75 A resolution 2,5-dihydroxybenzensulfonate inhibited Sporosarcina pasteurii urease
分子名称: 1,2-ETHANEDIOL, 2,5-dihydroxybenzenesulfonic acid, HYDROXIDE ION, ...
著者Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
登録日2016-01-04
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Inactivation of Urease by 1,4-Benzoquinone: Chemistry at the Protein Surface.
Dalton Trans, 45, 2016
5FSE
DownloadVisualize
BU of 5fse by Molmil
2.07 A resolution 1,4-Benzoquinone inhibited Sporosarcina pasteurii urease
分子名称: 1,2-ETHANEDIOL, HYDROXIDE ION, NICKEL (II) ION, ...
著者Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
登録日2016-01-04
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Inactivation of Urease by 1,4-Benzoquinone: Chemistry at the Protein Surface.
Dalton Trans, 45, 2016
5OL4
DownloadVisualize
BU of 5ol4 by Molmil
1.28 A resolution of Sporosarcina pasteurii urease inhibited in the presence of NBPT
分子名称: 1,2-ETHANEDIOL, NICKEL (II) ION, Phosphoramidothioic O,O-acid, ...
著者Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
登録日2017-07-26
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Urease Inhibition in the Presence of N-(n-Butyl)thiophosphoric Triamide, a Suicide Substrate: Structure and Kinetics.
Biochemistry, 56, 2017
6ZO0
DownloadVisualize
BU of 6zo0 by Molmil
2.23 A resolution 3,4-dimethylcatechol (3,4-dimethylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
分子名称: 1,2-ETHANEDIOL, HYDROXIDE ION, NICKEL (II) ION, ...
著者Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
登録日2020-07-07
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Inhibition of Urease, a Ni-Enzyme: The Reactivity of a Key Thiol With Mono- and Di-Substituted Catechols Elucidated by Kinetic, Structural, and Theoretical Studies.
Angew.Chem.Int.Ed.Engl., 60, 2021
6ZNY
DownloadVisualize
BU of 6zny by Molmil
1.50 A resolution 3-methylcatechol (3-methylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
分子名称: 1,2-ETHANEDIOL, HYDROXIDE ION, NICKEL (II) ION, ...
著者Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
登録日2020-07-07
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibition of Urease, a Ni-Enzyme: The Reactivity of a Key Thiol With Mono- and Di-Substituted Catechols Elucidated by Kinetic, Structural, and Theoretical Studies.
Angew.Chem.Int.Ed.Engl., 60, 2021
6ZO1
DownloadVisualize
BU of 6zo1 by Molmil
1.61 A resolution 3,5-dimethylcatechol (3,5-dimethylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
分子名称: 1,2-ETHANEDIOL, HYDROXIDE ION, NICKEL (II) ION, ...
著者Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
登録日2020-07-07
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Inhibition of Urease, a Ni-Enzyme: The Reactivity of a Key Thiol With Mono- and Di-Substituted Catechols Elucidated by Kinetic, Structural, and Theoretical Studies.
Angew.Chem.Int.Ed.Engl., 60, 2021
6ZNZ
DownloadVisualize
BU of 6znz by Molmil
1.89 A resolution 4-methylcatechol (4-methylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
分子名称: 1,2-ETHANEDIOL, HYDROXIDE ION, NICKEL (II) ION, ...
著者Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
登録日2020-07-07
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Inhibition of Urease, a Ni-Enzyme: The Reactivity of a Key Thiol With Mono- and Di-Substituted Catechols Elucidated by Kinetic, Structural, and Theoretical Studies.
Angew.Chem.Int.Ed.Engl., 60, 2021
6ZO3
DownloadVisualize
BU of 6zo3 by Molmil
1.55 A resolution 3,6-dimethylcatechol (3,6-dimethylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
分子名称: 1,2-ETHANEDIOL, HYDROXIDE ION, NICKEL (II) ION, ...
著者Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
登録日2020-07-07
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Inhibition of Urease, a Ni-Enzyme: The Reactivity of a Key Thiol With Mono- and Di-Substituted Catechols Elucidated by Kinetic, Structural, and Theoretical Studies.
Angew.Chem.Int.Ed.Engl., 60, 2021
6ZO2
DownloadVisualize
BU of 6zo2 by Molmil
1.65 A resolution 4,5-dimethylcatechol (4,5-dimethylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
分子名称: 1,2-ETHANEDIOL, HYDROXIDE ION, NICKEL (II) ION, ...
著者Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
登録日2020-07-07
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Inhibition of Urease, a Ni-Enzyme: The Reactivity of a Key Thiol With Mono- and Di-Substituted Catechols Elucidated by Kinetic, Structural, and Theoretical Studies.
Angew.Chem.Int.Ed.Engl., 60, 2021
6YTZ
DownloadVisualize
BU of 6ytz by Molmil
Crystal structure of Malus domestica Double Bond Reductase (MdDBR) in complex with NADPH
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Double Bond Reductase, ...
著者Caliandro, R, Polsinelli, I, Demitri, N, Benini, S.
登録日2020-04-25
公開日2021-02-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The structural and functional characterization of Malus domestica double bond reductase MdDBR provides insights towards the identification of its substrates.
Int.J.Biol.Macromol., 171, 2021
8CON
DownloadVisualize
BU of 8con by Molmil
Crystal structure of alcohol dehydrogenase from Arabidopsis thaliana in complex with NADH
分子名称: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alcohol dehydrogenase class-P, ...
著者Fermani, S, Fanti, S, Carloni, G, Falini, G, Meloni, M, Zaffagnini, M.
登録日2023-02-28
公開日2024-02-21
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and biochemical characterization of Arabidopsis alcohol dehydrogenases reveals distinct functional properties but similar redox sensitivity.
Plant J., 118, 2024
8CO4
DownloadVisualize
BU of 8co4 by Molmil
Crystal structure of apo S-nitrosoglutathione reductase from Arabidopsis thalina
分子名称: 1,2-ETHANEDIOL, Alcohol dehydrogenase class-3, DI(HYDROXYETHYL)ETHER, ...
著者Fermani, S, Fanti, S, Carloni, G, Rossi, J, Falini, G, Zaffagnini, M.
登録日2023-02-27
公開日2024-02-21
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and biochemical characterization of Arabidopsis alcohol dehydrogenases reveals distinct functional properties but similar redox sensitivity.
Plant J., 118, 2024
4D48
DownloadVisualize
BU of 4d48 by Molmil
Crystal Structure of glucose-1-phosphate uridylyltransferase GalU from Erwinia amylovora.
分子名称: GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
著者Toccafondi, M, Wuerges, J, Cianci, M, Benini, S.
登録日2014-10-27
公開日2016-01-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Glucose-1-phosphate uridylyltransferase from Erwinia amylovora: Activity, structure and substrate specificity.
Biochim. Biophys. Acta, 1865, 2017
4D74
DownloadVisualize
BU of 4d74 by Molmil
1.57 A crystal structure of erwinia amylovora tyrosine phosphatase amsI
分子名称: PROTEIN-TYROSINE-PHOSPHATASE AMSI, SULFATE ION
著者Benini, S, Salomone-Stagni, M, Caputi, L, Cianci, M.
登録日2014-11-19
公開日2016-01-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Characterization and 1.57 A Resolution Structure of the Key Fire Blight Phosphatase Amsi from Erwinia Amylovora
Acta Crystallogr.,Sect.F, 72, 2016
7P6F
DownloadVisualize
BU of 7p6f by Molmil
1.93 A resolution X-ray crystal structure of the transcriptional regulator SrnR from Streptomyces griseus
分子名称: ACETATE ION, SODIUM ION, Transcriptional regulator SrnR
著者Mazzei, L, Ciurli, S.
登録日2021-07-16
公開日2022-05-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structure, dynamics, and function of SrnR, a transcription factor for nickel-dependent gene expression.
Metallomics, 13, 2021
6YSB
DownloadVisualize
BU of 6ysb by Molmil
Crystal structure of Malus domestica Double Bond Reductase (MdDBR) apo form
分子名称: 2-alkenal reductase (NADP(+)-dependent)-like, SULFATE ION
著者Caliandro, R, Polsinelli, I, Demitri, N, Benini, S.
登録日2020-04-21
公開日2021-02-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The structural and functional characterization of Malus domestica double bond reductase MdDBR provides insights towards the identification of its substrates.
Int.J.Biol.Macromol., 171, 2021
6YUX
DownloadVisualize
BU of 6yux by Molmil
Crystal structure of Malus domestica Double Bond Reductase (MdDBR) ternary complex
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, ...
著者Caliandro, R, Polsinelli, I, Demitri, N, Benini, S.
登録日2020-04-27
公開日2021-02-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献The structural and functional characterization of Malus domestica double bond reductase MdDBR provides insights towards the identification of its substrates.
Int.J.Biol.Macromol., 171, 2021
7B3E
DownloadVisualize
BU of 7b3e by Molmil
Crystal structure of myricetin covalently bound to the main protease (3CLpro/Mpro) of SARS-CoV-2
分子名称: 1,2-ETHANEDIOL, 3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, CHLORIDE ION, ...
著者Costanzi, E, Demitri, N, Giabbai, B, Storici, P.
登録日2020-11-30
公開日2021-01-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Identification of Inhibitors of SARS-CoV-2 3CL-Pro Enzymatic Activity Using a Small Molecule in Vitro Repurposing Screen.
Acs Pharmacol Transl Sci, 4, 2021

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon